mRNA_H-fluviatilis_contig103046.634.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A0Q4GQJ4_9SPHN (Histidine kinase n=5 Tax=Sphingomonas TaxID=13687 RepID=A0A0Q4GQJ4_9SPHN) HSP 1 Score: 428 bits (1100), Expect = 1.920e-146 Identity = 227/266 (85.34%), Postives = 246/266 (92.48%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RVAGT LEITARREAQDALRELNATLEAR++AA+R REEAQ ALRQSQKMEAMGQLTGGVAHDFNNLLTPI+G LDMLQRKG+G+ERE+RLI GA QSAERARTLVQRLLAFARRQPLQPVPVD+A L+EGMGDLV+STTGPQI+V+V+APA LPPAKADPNQLEMA+LNLAVNARDAMP GGTLRIS SRES+ +R LR GHYLRLSVADTG+GMD ET ARAIEPFFSTKG+GKGTGLGLSMVHGLASQLGGAL IQS P
Sbjct: 75 IRVAGTALEITARREAQDALRELNATLEARVDAAIRAREEAQAALRQSQKMEAMGQLTGGVAHDFNNLLTPILGSLDMLQRKGLGNERERRLIDGAVQSAERARTLVQRLLAFARRQPLQPVPVDVAALIEGMGDLVASTTGPQIRVIVDAPADLPPAKADPNQLEMAILNLAVNARDAMPDGGTLRISASRESIRTAHRANLRTGHYLRLSVADTGLGMDSETQARAIEPFFSTKGVGKGTGLGLSMVHGLASQLGGALTIQSSP 340
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: UPI001FD7E929 (response regulator n=1 Tax=Sphingomonas jejuensis TaxID=904715 RepID=UPI001FD7E929) HSP 1 Score: 426 bits (1095), Expect = 3.700e-144 Identity = 229/266 (86.09%), Postives = 247/266 (92.86%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
VRVAGTVLEITARREAQDAL ELNATLEAR+E+AVREREEAQEALR SQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G+EREQRLIAGAAQSAERA+TLVQRLLAFARRQPLQPVPV+IATLVEGMG LV+STTGPQI+VV++AP LPPAKADPNQLEMA+LNLAVNARDAMP GGTLR++ S E++G +R GL G Y+RLSVADTG GMD ETL RA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct: 197 VRVAGTVLEITARREAQDALSELNATLEARVESAVREREEAQEALRHSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRKGIGNEREQRLIAGAAQSAERAKTLVQRLLAFARRQPLQPVPVNIATLVEGMGSLVASTTGPQIRVVLDAPTDLPPAKADPNQLEMAILNLAVNARDAMPDGGTLRVTASAETIGEAHRSGLPNGPYVRLSVADTGAGMDAETLTRAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALVIQSRP 462
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A318BI12_9NOSO (Hybrid sensor histidine kinase/response regulator n=1 Tax=Nostoc sp. 3335mG TaxID=2204170 RepID=A0A318BI12_9NOSO) HSP 1 Score: 404 bits (1038), Expect = 9.340e-132 Identity = 220/265 (83.02%), Postives = 239/265 (90.19%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSR 795
VRVAGTV+EITARR+AQDAL+ LNATLEAR+EAA+RERE AQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQR VG++REQRLI AAQSAERARTLVQRLLAFARRQPLQPVPVDIA+LV+GM +LVSST GPQIKVVV+AP LP AKADPNQLEMA++NLAVNARDAMP GGTL ISV RES+ A LR GH+LRLSVADTG GMD+ TLARA+EPFFSTKGIGKGTGLGLSM HGLASQLGGAL I+S+
Sbjct: 525 VRVAGTVVEITARRQAQDALQTLNATLEARVEAAIREREAAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRNKVGNDREQRLITAAAQSAERARTLVQRLLAFARRQPLQPVPVDIASLVKGMAELVSSTIGPQIKVVVDAPVDLPHAKADPNQLEMAIVNLAVNARDAMPDGGTLTISVRRESVRAMPNANLRTGHFLRLSVADTGQGMDETTLARAVEPFFSTKGIGKGTGLGLSMAHGLASQLGGALTIESQ 789
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A840YSH8_9SPHN (Histidine kinase n=1 Tax=Sphingomonas xinjiangensis TaxID=643568 RepID=A0A840YSH8_9SPHN) HSP 1 Score: 402 bits (1034), Expect = 3.760e-131 Identity = 219/266 (82.33%), Postives = 236/266 (88.72%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RVAGT ++ITAR+EA++ALR+LNATLEARI AV ER LRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLIAGA QSAERARTLVQRLLAFARRQPLQPVPVD++ LV GMGDLVSSTTGPQIKVVVE LPPAKADPNQLEMA+LNLAVNARDAM GGTLRIS SRES+ +R LR GHY+RLSVADTG+GMD+ TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct: 528 LRVAGTAVQITARKEAEEALRDLNATLEARIATAVAERXXXXXXLRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRKGLGGEREQRLIAGAVQSAERARTLVQRLLAFARRQPLQPVPVDVSKLVAGMGDLVSSTTGPQIKVVVETADDLPPAKADPNQLEMALLNLAVNARDAMSDGGTLRISASRESIRPGHRSRLRTGHYIRLSVADTGIGMDEATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSRP 793
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A7W9EUZ8_9SPHN (Histidine kinase n=2 Tax=Sphingomonas aerophila TaxID=1344948 RepID=A0A7W9EUZ8_9SPHN) HSP 1 Score: 393 bits (1010), Expect = 7.440e-128 Identity = 215/266 (80.83%), Postives = 234/266 (87.97%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
VRV GT ++ITAR+EA++AL ELNATLEARI AV EREE QEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LD+LQRKGVG EREQRLIAGA QSAERARTLVQRLLAFARRQPL+ VPVD+A LV GMG+LV+STTGPQIKV VE A LP A ADPNQLEMA+LNLAVNARDAMP GGTLRI+ RES+ A +R L+ GHYL LSVADTG GMD TLARA+EPFFSTKGIG+GTGLGLSMVHGLASQLGGA+ IQS+P
Sbjct: 499 VRVTGTAIQITARKEAEEALYELNATLEARIATAVAEREEVQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDLLQRKGVGGEREQRLIAGAVQSAERARTLVQRLLAFARRQPLRAVPVDLARLVTGMGELVASTTGPQIKVTVEIMADLPAANADPNQLEMAILNLAVNARDAMPDGGTLRITARRESIRAGHRSKLKPGHYLCLSVADTGAGMDAATLARAVEPFFSTKGIGQGTGLGLSMVHGLASQLGGAITIQSQP 764
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A7Y6B4B2_9SPHN (Histidine kinase n=3 Tax=Sphingomonas zeae TaxID=1646122 RepID=A0A7Y6B4B2_9SPHN) HSP 1 Score: 388 bits (996), Expect = 1.190e-127 Identity = 211/266 (79.32%), Postives = 233/266 (87.59%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RVAGT L+ITAR+ A++ALRELNATLEAR+ AA+ +REEA EALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLIAGAA SAERARTLVQRLLAFARRQPLQ V VD+A LV GMGDLV STTGPQI+VVVE LP AKADPNQLEMA+LNL+VNARDAMP GGTLRIS + E++ +R L G ++ LSVADTG GMD+ T+ARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct: 324 LRVAGTALDITARKRAEEALRELNATLEARVAAAIADREEAHEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGALDMLQRKGLGGEREQRLIAGAALSAERARTLVQRLLAFARRQPLQAVSVDVAKLVSGMGDLVESTTGPQIRVVVEVETDLPAAKADPNQLEMALLNLSVNARDAMPDGGTLRISATVEAISKGHRSRLAPGSFICLSVADTGTGMDEATIARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSRP 589
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A318APV8_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. 3335mG TaxID=2204170 RepID=A0A318APV8_9NOSO) HSP 1 Score: 396 bits (1018), Expect = 8.290e-127 Identity = 218/266 (81.95%), Postives = 235/266 (88.35%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RVAGT ++ITAR+ A++ALRELNATLEAR+E AV ERE AQ ALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLI GAA+SA+RA+TLVQRLLAFARRQPLQ V VDIA LV GMGDLVSSTTGPQIKVVVEA LP A+ADPNQLEMA+LNLAVNARDAMP GGTLRIS R ++ R GLRAG Y+RLSVADTG GMDD T+ARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQS P
Sbjct: 748 LRVAGTAVDITARKVAEEALRELNATLEARVERAVAEREAAQAALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGALDMLQRKGIGGEREQRLIDGAAKSADRAKTLVQRLLAFARRQPLQAVAVDIAKLVHGMGDLVSSTTGPQIKVVVEASDELPAAQADPNQLEMAILNLAVNARDAMPDGGTLRISAQRGTVSGGERPGLRAGDYIRLSVADTGAGMDDATVARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSAP 1013
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A389MTV8_9HYPH (Histidine kinase n=8 Tax=Bacteria TaxID=2 RepID=A0A389MTV8_9HYPH) HSP 1 Score: 395 bits (1015), Expect = 2.820e-126 Identity = 216/266 (81.20%), Postives = 235/266 (88.35%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RVAGT +EITAR+ A++ALRELNATLE RI A+ +REEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG+LDMLQR+ VG EREQRLIAGAAQSAERA+TLVQRLLAFARRQPLQ VPVD+A LV GMG+LV+STTGPQIKVVV AP LPPA AD NQLEMA+LNL+VNARDAMP GGTLRIS S ES+ +R L AGHY+ LSVADTG GMD TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQL GAL IQSRP
Sbjct: 757 LRVAGTAVEITARKAAEEALRELNATLETRIAKAIADREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGVLDMLQRRNVGGEREQRLIAGAAQSAERAKTLVQRLLAFARRQPLQAVPVDVAKLVTGMGELVASTTGPQIKVVVSAPDDLPPAVADANQLEMALLNLSVNARDAMPEGGTLRISASAESIRPGHRSNLPAGHYICLSVADTGAGMDAATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLNGALTIQSRP 1022
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A502G4P9_9SPHN (Histidine kinase n=2 Tax=Sphingomonas glacialis TaxID=658225 RepID=A0A502G4P9_9SPHN) HSP 1 Score: 385 bits (990), Expect = 1.790e-125 Identity = 205/265 (77.36%), Postives = 231/265 (87.17%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSR 795
+RVAGT ++ITAR+EA++ALRELN TLE RI A+ ERE+ E LRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LD+LQRKG+G EREQRLIAGA QSA+RARTLVQRLLAFARRQPLQP+P+D+ L+ GMG+LVSST GPQI+VVVE LPPA ADPNQLEMA+LNLAVNARDAMP GGTLRI+ RES+ + +R LR GHY+ LSVADTGVGMD TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGG + IQS+
Sbjct: 441 IRVAGTAVQITARKEAEEALRELNTTLETRITTAIAEREDVLEVLRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDLLQRKGLGGEREQRLIAGAVQSADRARTLVQRLLAFARRQPLQPIPIDVPELISGMGELVSSTIGPQIRVVVEVRDELPPALADPNQLEMAILNLAVNARDAMPDGGTLRITARRESIRSGHRSKLRTGHYICLSVADTGVGMDAATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGTITIQSQ 705
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: UPI001968451B (Response regulator n=2 Tax=Pseudomonas sp. 15A4 TaxID=2804761 RepID=UPI001968451B) HSP 1 Score: 380 bits (975), Expect = 2.370e-125 Identity = 206/266 (77.44%), Postives = 228/266 (85.71%), Query Frame = 1
Query: 1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
+RV GT +E+TAR+EA++ LRELNATLE RI A+ EREE Q ALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQR+GVG EREQRLI+GA QSA+RARTLVQRLLAFARRQPLQPV VD+A LV GMGDLV+STTGPQI+VVV+AP LP A ADPNQLEMA+LNL+VNARDAMP GGT+RIS E + +R L G YL LSVADTG+GMD TLARA+EPFFSTKG+GKGTGLGLSMVHGLASQL GAL IQS P
Sbjct: 250 LRVTGTAVEVTARKEAEEGLRELNATLEGRIANAIAEREEVQAALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGTLDMLQRRGVGGEREQRLISGAVQSADRARTLVQRLLAFARRQPLQPVSVDVAKLVNGMGDLVASTTGPQIRVVVDAPPDLPAAIADPNQLEMALLNLSVNARDAMPEGGTMRISACTEWVSRDHRSRLPTGDYLCLSVADTGIGMDAPTLARAVEPFFSTKGVGKGTGLGLSMVHGLASQLNGALTIQSSP 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103046.634.1 >prot_H-fluviatilis_contig103046.634.1 ID=prot_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=266bp VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKback to top mRNA from alignment at H-fluviatilis_contig103046:2..799- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103046.634.1 ID=mRNA_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=798bp|location=Sequence derived from alignment at H-fluviatilis_contig103046:2..799- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103046:2..799- >mRNA_H-fluviatilis_contig103046.634.1 ID=mRNA_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1596bp|location=Sequence derived from alignment at H-fluviatilis_contig103046:2..799- (Heribaudiella fluviatilis SAG_13_90)back to top |