mRNA_H-fluviatilis_contig103046.634.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig103046.634.1
Unique NamemRNA_H-fluviatilis_contig103046.634.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A0Q4GQJ4_9SPHN (Histidine kinase n=5 Tax=Sphingomonas TaxID=13687 RepID=A0A0Q4GQJ4_9SPHN)

HSP 1 Score: 428 bits (1100), Expect = 1.920e-146
Identity = 227/266 (85.34%), Postives = 246/266 (92.48%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RVAGT LEITARREAQDALRELNATLEAR++AA+R REEAQ ALRQSQKMEAMGQLTGGVAHDFNNLLTPI+G LDMLQRKG+G+ERE+RLI GA QSAERARTLVQRLLAFARRQPLQPVPVD+A L+EGMGDLV+STTGPQI+V+V+APA LPPAKADPNQLEMA+LNLAVNARDAMP GGTLRIS SRES+   +R  LR GHYLRLSVADTG+GMD ET ARAIEPFFSTKG+GKGTGLGLSMVHGLASQLGGAL IQS P
Sbjct:   75 IRVAGTALEITARREAQDALRELNATLEARVDAAIRAREEAQAALRQSQKMEAMGQLTGGVAHDFNNLLTPILGSLDMLQRKGLGNERERRLIDGAVQSAERARTLVQRLLAFARRQPLQPVPVDVAALIEGMGDLVASTTGPQIRVIVDAPADLPPAKADPNQLEMAILNLAVNARDAMPDGGTLRISASRESIRTAHRANLRTGHYLRLSVADTGLGMDSETQARAIEPFFSTKGVGKGTGLGLSMVHGLASQLGGALTIQSSP 340          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: UPI001FD7E929 (response regulator n=1 Tax=Sphingomonas jejuensis TaxID=904715 RepID=UPI001FD7E929)

HSP 1 Score: 426 bits (1095), Expect = 3.700e-144
Identity = 229/266 (86.09%), Postives = 247/266 (92.86%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            VRVAGTVLEITARREAQDAL ELNATLEAR+E+AVREREEAQEALR SQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G+EREQRLIAGAAQSAERA+TLVQRLLAFARRQPLQPVPV+IATLVEGMG LV+STTGPQI+VV++AP  LPPAKADPNQLEMA+LNLAVNARDAMP GGTLR++ S E++G  +R GL  G Y+RLSVADTG GMD ETL RA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct:  197 VRVAGTVLEITARREAQDALSELNATLEARVESAVREREEAQEALRHSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRKGIGNEREQRLIAGAAQSAERAKTLVQRLLAFARRQPLQPVPVNIATLVEGMGSLVASTTGPQIRVVLDAPTDLPPAKADPNQLEMAILNLAVNARDAMPDGGTLRVTASAETIGEAHRSGLPNGPYVRLSVADTGAGMDAETLTRAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALVIQSRP 462          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A318BI12_9NOSO (Hybrid sensor histidine kinase/response regulator n=1 Tax=Nostoc sp. 3335mG TaxID=2204170 RepID=A0A318BI12_9NOSO)

HSP 1 Score: 404 bits (1038), Expect = 9.340e-132
Identity = 220/265 (83.02%), Postives = 239/265 (90.19%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSR 795
            VRVAGTV+EITARR+AQDAL+ LNATLEAR+EAA+RERE AQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQR  VG++REQRLI  AAQSAERARTLVQRLLAFARRQPLQPVPVDIA+LV+GM +LVSST GPQIKVVV+AP  LP AKADPNQLEMA++NLAVNARDAMP GGTL ISV RES+ A     LR GH+LRLSVADTG GMD+ TLARA+EPFFSTKGIGKGTGLGLSM HGLASQLGGAL I+S+
Sbjct:  525 VRVAGTVVEITARRQAQDALQTLNATLEARVEAAIREREAAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRNKVGNDREQRLITAAAQSAERARTLVQRLLAFARRQPLQPVPVDIASLVKGMAELVSSTIGPQIKVVVDAPVDLPHAKADPNQLEMAIVNLAVNARDAMPDGGTLTISVRRESVRAMPNANLRTGHFLRLSVADTGQGMDETTLARAVEPFFSTKGIGKGTGLGLSMAHGLASQLGGALTIESQ 789          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A840YSH8_9SPHN (Histidine kinase n=1 Tax=Sphingomonas xinjiangensis TaxID=643568 RepID=A0A840YSH8_9SPHN)

HSP 1 Score: 402 bits (1034), Expect = 3.760e-131
Identity = 219/266 (82.33%), Postives = 236/266 (88.72%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RVAGT ++ITAR+EA++ALR+LNATLEARI  AV ER      LRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLIAGA QSAERARTLVQRLLAFARRQPLQPVPVD++ LV GMGDLVSSTTGPQIKVVVE    LPPAKADPNQLEMA+LNLAVNARDAM  GGTLRIS SRES+   +R  LR GHY+RLSVADTG+GMD+ TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct:  528 LRVAGTAVQITARKEAEEALRDLNATLEARIATAVAERXXXXXXLRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDMLQRKGLGGEREQRLIAGAVQSAERARTLVQRLLAFARRQPLQPVPVDVSKLVAGMGDLVSSTTGPQIKVVVETADDLPPAKADPNQLEMALLNLAVNARDAMSDGGTLRISASRESIRPGHRSRLRTGHYIRLSVADTGIGMDEATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSRP 793          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A7W9EUZ8_9SPHN (Histidine kinase n=2 Tax=Sphingomonas aerophila TaxID=1344948 RepID=A0A7W9EUZ8_9SPHN)

HSP 1 Score: 393 bits (1010), Expect = 7.440e-128
Identity = 215/266 (80.83%), Postives = 234/266 (87.97%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            VRV GT ++ITAR+EA++AL ELNATLEARI  AV EREE QEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LD+LQRKGVG EREQRLIAGA QSAERARTLVQRLLAFARRQPL+ VPVD+A LV GMG+LV+STTGPQIKV VE  A LP A ADPNQLEMA+LNLAVNARDAMP GGTLRI+  RES+ A +R  L+ GHYL LSVADTG GMD  TLARA+EPFFSTKGIG+GTGLGLSMVHGLASQLGGA+ IQS+P
Sbjct:  499 VRVTGTAIQITARKEAEEALYELNATLEARIATAVAEREEVQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDLLQRKGVGGEREQRLIAGAVQSAERARTLVQRLLAFARRQPLRAVPVDLARLVTGMGELVASTTGPQIKVTVEIMADLPAANADPNQLEMAILNLAVNARDAMPDGGTLRITARRESIRAGHRSKLKPGHYLCLSVADTGAGMDAATLARAVEPFFSTKGIGQGTGLGLSMVHGLASQLGGAITIQSQP 764          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A7Y6B4B2_9SPHN (Histidine kinase n=3 Tax=Sphingomonas zeae TaxID=1646122 RepID=A0A7Y6B4B2_9SPHN)

HSP 1 Score: 388 bits (996), Expect = 1.190e-127
Identity = 211/266 (79.32%), Postives = 233/266 (87.59%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RVAGT L+ITAR+ A++ALRELNATLEAR+ AA+ +REEA EALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLIAGAA SAERARTLVQRLLAFARRQPLQ V VD+A LV GMGDLV STTGPQI+VVVE    LP AKADPNQLEMA+LNL+VNARDAMP GGTLRIS + E++   +R  L  G ++ LSVADTG GMD+ T+ARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQSRP
Sbjct:  324 LRVAGTALDITARKRAEEALRELNATLEARVAAAIADREEAHEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGALDMLQRKGLGGEREQRLIAGAALSAERARTLVQRLLAFARRQPLQAVSVDVAKLVSGMGDLVESTTGPQIRVVVEVETDLPAAKADPNQLEMALLNLSVNARDAMPDGGTLRISATVEAISKGHRSRLAPGSFICLSVADTGTGMDEATIARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSRP 589          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A318APV8_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. 3335mG TaxID=2204170 RepID=A0A318APV8_9NOSO)

HSP 1 Score: 396 bits (1018), Expect = 8.290e-127
Identity = 218/266 (81.95%), Postives = 235/266 (88.35%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RVAGT ++ITAR+ A++ALRELNATLEAR+E AV ERE AQ ALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQRKG+G EREQRLI GAA+SA+RA+TLVQRLLAFARRQPLQ V VDIA LV GMGDLVSSTTGPQIKVVVEA   LP A+ADPNQLEMA+LNLAVNARDAMP GGTLRIS  R ++    R GLRAG Y+RLSVADTG GMDD T+ARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGAL IQS P
Sbjct:  748 LRVAGTAVDITARKVAEEALRELNATLEARVERAVAEREAAQAALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGALDMLQRKGIGGEREQRLIDGAAKSADRAKTLVQRLLAFARRQPLQAVAVDIAKLVHGMGDLVSSTTGPQIKVVVEASDELPAAQADPNQLEMAILNLAVNARDAMPDGGTLRISAQRGTVSGGERPGLRAGDYIRLSVADTGAGMDDATVARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALTIQSAP 1013          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A389MTV8_9HYPH (Histidine kinase n=8 Tax=Bacteria TaxID=2 RepID=A0A389MTV8_9HYPH)

HSP 1 Score: 395 bits (1015), Expect = 2.820e-126
Identity = 216/266 (81.20%), Postives = 235/266 (88.35%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RVAGT +EITAR+ A++ALRELNATLE RI  A+ +REEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG+LDMLQR+ VG EREQRLIAGAAQSAERA+TLVQRLLAFARRQPLQ VPVD+A LV GMG+LV+STTGPQIKVVV AP  LPPA AD NQLEMA+LNL+VNARDAMP GGTLRIS S ES+   +R  L AGHY+ LSVADTG GMD  TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQL GAL IQSRP
Sbjct:  757 LRVAGTAVEITARKAAEEALRELNATLETRIAKAIADREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGVLDMLQRRNVGGEREQRLIAGAAQSAERAKTLVQRLLAFARRQPLQAVPVDVAKLVTGMGELVASTTGPQIKVVVSAPDDLPPAVADANQLEMALLNLSVNARDAMPEGGTLRISASAESIRPGHRSNLPAGHYICLSVADTGAGMDAATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLNGALTIQSRP 1022          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: A0A502G4P9_9SPHN (Histidine kinase n=2 Tax=Sphingomonas glacialis TaxID=658225 RepID=A0A502G4P9_9SPHN)

HSP 1 Score: 385 bits (990), Expect = 1.790e-125
Identity = 205/265 (77.36%), Postives = 231/265 (87.17%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSR 795
            +RVAGT ++ITAR+EA++ALRELN TLE RI  A+ ERE+  E LRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LD+LQRKG+G EREQRLIAGA QSA+RARTLVQRLLAFARRQPLQP+P+D+  L+ GMG+LVSST GPQI+VVVE    LPPA ADPNQLEMA+LNLAVNARDAMP GGTLRI+  RES+ + +R  LR GHY+ LSVADTGVGMD  TLARA+EPFFSTKGIGKGTGLGLSMVHGLASQLGG + IQS+
Sbjct:  441 IRVAGTAVQITARKEAEEALRELNTTLETRITTAIAEREDVLEVLRQSQKMEAMGQLTGGVAHDFNNLLTPIVGSLDLLQRKGLGGEREQRLIAGAVQSADRARTLVQRLLAFARRQPLQPIPIDVPELISGMGELVSSTIGPQIRVVVEVRDELPPALADPNQLEMAILNLAVNARDAMPDGGTLRITARRESIRSGHRSKLRTGHYICLSVADTGVGMDAATLARAVEPFFSTKGIGKGTGLGLSMVHGLASQLGGTITIQSQ 705          
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Match: UPI001968451B (Response regulator n=2 Tax=Pseudomonas sp. 15A4 TaxID=2804761 RepID=UPI001968451B)

HSP 1 Score: 380 bits (975), Expect = 2.370e-125
Identity = 206/266 (77.44%), Postives = 228/266 (85.71%), Query Frame = 1
Query:    1 VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSAERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVEAPAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNRCGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGALAIQSRP 798
            +RV GT +E+TAR+EA++ LRELNATLE RI  A+ EREE Q ALRQSQKMEAMGQLTGGVAHDFNNLLTPIVG LDMLQR+GVG EREQRLI+GA QSA+RARTLVQRLLAFARRQPLQPV VD+A LV GMGDLV+STTGPQI+VVV+AP  LP A ADPNQLEMA+LNL+VNARDAMP GGT+RIS   E +   +R  L  G YL LSVADTG+GMD  TLARA+EPFFSTKG+GKGTGLGLSMVHGLASQL GAL IQS P
Sbjct:  250 LRVTGTAVEVTARKEAEEGLRELNATLEGRIANAIAEREEVQAALRQSQKMEAMGQLTGGVAHDFNNLLTPIVGTLDMLQRRGVGGEREQRLISGAVQSADRARTLVQRLLAFARRQPLQPVSVDVAKLVNGMGDLVASTTGPQIRVVVDAPPDLPAAIADPNQLEMALLNLSVNARDAMPEGGTMRISACTEWVSRDHRSRLPTGDYLCLSVADTGIGMDAPTLARAVEPFFSTKGVGKGTGLGLSMVHGLASQLNGALTIQSSP 515          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103046.634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0Q4GQJ4_9SPHN1.920e-14685.34Histidine kinase n=5 Tax=Sphingomonas TaxID=13687 ... [more]
UPI001FD7E9293.700e-14486.09response regulator n=1 Tax=Sphingomonas jejuensis ... [more]
A0A318BI12_9NOSO9.340e-13283.02Hybrid sensor histidine kinase/response regulator ... [more]
A0A840YSH8_9SPHN3.760e-13182.33Histidine kinase n=1 Tax=Sphingomonas xinjiangensi... [more]
A0A7W9EUZ8_9SPHN7.440e-12880.83Histidine kinase n=2 Tax=Sphingomonas aerophila Ta... [more]
A0A7Y6B4B2_9SPHN1.190e-12779.32Histidine kinase n=3 Tax=Sphingomonas zeae TaxID=1... [more]
A0A318APV8_9NOSO8.290e-12781.95Uncharacterized protein n=1 Tax=Nostoc sp. 3335mG ... [more]
A0A389MTV8_9HYPH2.820e-12681.20Histidine kinase n=8 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A502G4P9_9SPHN1.790e-12577.36Histidine kinase n=2 Tax=Sphingomonas glacialis Ta... [more]
UPI001968451B2.370e-12577.44Response regulator n=2 Tax=Pseudomonas sp. 15A4 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig103046contigH-fluviatilis_contig103046:2..799 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score387.9
Seed ortholog evalue3.9e-105
Seed eggNOG ortholog194867.ALBQ01000042_gene1349
EggNOG free text desc.Histidine kinase
EggNOG OGs1RCM9@1224,2K01C@204457,2TQQ9@28211,COG2203@1,COG2203@2,COG4191@1,COG4191@2
COG Functional cat.T
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.8931787-CDS-H-fluviatilis_contig103046:1..7991622929073.8931787-CDS-H-fluviatilis_contig103046:1..799Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103046 2..799 -
1691135172.7513266-CDS-H-fluviatilis_contig103046:1..7991691135172.7513266-CDS-H-fluviatilis_contig103046:1..799Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103046 2..799 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig103046.634.1prot_H-fluviatilis_contig103046.634.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig103046 2..799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig103046.634.1

>prot_H-fluviatilis_contig103046.634.1 ID=prot_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=266bp
VRVAGTVLEITARREAQDALRELNATLEARIEAAVREREEAQEALRQSQK
MEAMGQLTGGVAHDFNNLLTPIVGILDMLQRKGVGSEREQRLIAGAAQSA
ERARTLVQRLLAFARRQPLQPVPVDIATLVEGMGDLVSSTTGPQIKVVVE
APAGLPPAKADPNQLEMAVLNLAVNARDAMPGGGTLRISVSRESLGAQNR
CGLRAGHYLRLSVADTGVGMDDETLARAIEPFFSTKGIGKGTGLGLSMVH
GLASQLGGALAIQSRP
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mRNA from alignment at H-fluviatilis_contig103046:2..799-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig103046.634.1 ID=mRNA_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=798bp|location=Sequence derived from alignment at H-fluviatilis_contig103046:2..799- (Heribaudiella fluviatilis SAG_13_90)
GTCCGGGTAGCAGGCACCGTATTGGAGATCACCGCGCGCAGGGAAGCGCA AGACGCCCTACGCGAGCTGAATGCAACGCTGGAGGCCCGTATCGAGGCGG CCGTGCGCGAGCGCGAGGAGGCGCAGGAGGCGCTCCGCCAGAGCCAGAAG ATGGAGGCAATGGGGCAACTGACGGGCGGCGTCGCGCACGACTTTAACAA CCTACTGACACCCATCGTGGGCATCCTGGACATGCTTCAGCGCAAGGGTG TCGGCAGCGAGCGGGAGCAGCGGCTCATCGCCGGCGCGGCGCAATCGGCG GAGCGGGCGAGGACACTTGTCCAGCGACTGCTCGCCTTCGCCCGCCGCCA ACCGCTGCAGCCGGTACCGGTCGACATCGCGACGCTGGTTGAGGGCATGG GCGACCTGGTGTCGAGCACGACCGGGCCGCAGATAAAGGTGGTGGTCGAG GCACCAGCAGGACTGCCACCAGCGAAAGCAGATCCAAATCAGCTGGAGAT GGCGGTCCTAAACCTGGCGGTGAACGCGCGCGACGCCATGCCGGGTGGCG GCACGCTACGCATCTCCGTTAGCAGGGAATCGCTCGGTGCACAGAACCGC TGCGGCTTACGGGCCGGACACTATCTGCGCCTTTCCGTCGCGGACACCGG CGTGGGCATGGATGACGAAACGCTGGCAAGGGCGATTGAACCGTTTTTCT CCACCAAGGGCATCGGCAAGGGAACGGGGCTCGGTCTGTCCATGGTCCAT GGGCTCGCCTCCCAGCTCGGAGGCGCGCTCGCAATTCAGAGCCGCCCT
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Coding sequence (CDS) from alignment at H-fluviatilis_contig103046:2..799-

>mRNA_H-fluviatilis_contig103046.634.1 ID=mRNA_H-fluviatilis_contig103046.634.1|Name=mRNA_H-fluviatilis_contig103046.634.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1596bp|location=Sequence derived from alignment at H-fluviatilis_contig103046:2..799- (Heribaudiella fluviatilis SAG_13_90)
GTCCGGGTAGCAGGCACCGTATTGGAGATCACCGCGCGCAGGGAAGCGCA
AGACGCCCTACGCGAGCTGAATGCAACGCTGGAGGCCCGTATCGAGGCGG
CCGTGCGCGAGCGCGAGGAGGCGCAGGAGGCGCTCCGCCAGAGCCAGAAG
ATGGAGGCAATGGGGCAACTGACGGGCGGCGTCGCGCACGACTTTAACAA
CCTACTGACACCCATCGTGGGCATCCTGGACATGCTTCAGCGCAAGGGTG
TCGGCAGCGAGCGGGAGCAGCGGCTCATCGCCGGCGCGGCGCAATCGGCG
GAGCGGGCGAGGACACTTGTCCAGCGACTGCTCGCCTTCGCCCGCCGCCA
ACCGCTGCAGCCGGTACCGGTCGACATCGCGACGCTGGTTGAGGGCATGG
GCGACCTGGTGTCGAGCACGACCGGGCCGCAGATAAAGGTGGTGGTCGAG
GCACCAGCAGGACTGCCACCAGCGAAAGCAGATCCAAATCAGCTGGAGAT
GGCGGTCCTAAACCTGGCGGTGAACGCGCGCGACGCCATGCCGGGTGGCG
GCACGCTACGCATCTCCGTTAGCAGGGAATCGCTCGGTGCACAGAACCGC
TGCGGCTTACGGGCCGGACACTATCTGCGCCTTTCCGTCGCGGACACCGG
CGTGGGCATGGATGACGAAACGCTGGCAAGGGCGATTGAACCGTTTTTCT
CCACCAAGGGCATCGGCAAGGGAACGGGGCTCGGTCTGTCCATGGTCCAT
GGGCTCGCCTCCCAGCTCGGAGGCGCGCTCGCAATTCAGAGCCGCCCTGT
CCGGGTAGCAGGCACCGTATTGGAGATCACCGCGCGCAGGGAAGCGCAAG
ACGCCCTACGCGAGCTGAATGCAACGCTGGAGGCCCGTATCGAGGCGGCC
GTGCGCGAGCGCGAGGAGGCGCAGGAGGCGCTCCGCCAGAGCCAGAAGAT
GGAGGCAATGGGGCAACTGACGGGCGGCGTCGCGCACGACTTTAACAACC
TACTGACACCCATCGTGGGCATCCTGGACATGCTTCAGCGCAAGGGTGTC
GGCAGCGAGCGGGAGCAGCGGCTCATCGCCGGCGCGGCGCAATCGGCGGA
GCGGGCGAGGACACTTGTCCAGCGACTGCTCGCCTTCGCCCGCCGCCAAC
CGCTGCAGCCGGTACCGGTCGACATCGCGACGCTGGTTGAGGGCATGGGC
GACCTGGTGTCGAGCACGACCGGGCCGCAGATAAAGGTGGTGGTCGAGGC
ACCAGCAGGACTGCCACCAGCGAAAGCAGATCCAAATCAGCTGGAGATGG
CGGTCCTAAACCTGGCGGTGAACGCGCGCGACGCCATGCCGGGTGGCGGC
ACGCTACGCATCTCCGTTAGCAGGGAATCGCTCGGTGCACAGAACCGCTG
CGGCTTACGGGCCGGACACTATCTGCGCCTTTCCGTCGCGGACACCGGCG
TGGGCATGGATGACGAAACGCTGGCAAGGGCGATTGAACCGTTTTTCTCC
ACCAAGGGCATCGGCAAGGGAACGGGGCTCGGTCTGTCCATGGTCCATGG
GCTCGCCTCCCAGCTCGGAGGCGCGCTCGCAATTCAGAGCCGCCCT
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