mRNA_H-fluviatilis_contig10304.633.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 237 bits (605), Expect = 3.820e-69 Identity = 124/259 (47.88%), Postives = 165/259 (63.71%), Query Frame = 1
Query: 301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQET--AMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRGGGALEQNVRERA*GCGMLHWRPQGPVQDSQAARPLP-VGEDRQRVLHVLYSTQHATHIRRIGRTRGQRELG 1065
T +G+G MS MS A + A FH FCKHFA E+Y +HI+LP+ E M+QY +LGF+GA+GS VTH+ W++C Y+L R YTG EG TI Y TV+H+ R AVT+GF G+ NDKTI+ +D AV++IR + Y +K F + +EDGT +G YLLV+NGYHKW ++ PA+R L + ERA G GML P+ P+QD +A +P G RQRVLHVL+ QHA H+RR GR G+ +G
Sbjct: 131 TILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHAAHLRRNGRAGGKHAMG 389
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.660e-51 Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 1
Query: 343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRG 855
MS +S + +TFH+FCK+FA ELY ++++LPTG MEQY ++GF GA+GST VTH+ W C Y+ AR YTG EG T+A+ TVDHS RVLAVT+GF GA NDKTI+ YDKAV RIR VY ++ + L ++DG E +G YLLV+NGYHKW P++ P RG
Sbjct: 103 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRG 274
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.750e-51 Identity = 110/254 (43.31%), Postives = 145/254 (57.09%), Query Frame = 1
Query: 79 CIHVQTSAR-HRGH*CRKKTCRTIRREMQEYFGGASASPPCSSEKLSSW*RIGSGLHL--PKRMLQGGAASQSSSSTTDIGQGQLLRRRD------PMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHK 813
C +TS R HR + CR+ T R RR + W R LH + L+G A + ++ST + Q+L R + +S MS+ + ATFHKFCKHFA+EL+ +HI+LPTG+ Q+ M Y KLG TGAIGST VTH+ W C ++L R YTG EGF TIAY TVDH+ R +A+T GF GA NDKTI+ YD V I+ Y + + LR DGT E +G Y +V+NGYH+
Sbjct: 197 CTVTRTSHRWHRKYCCRRPTAREKRRTL--------------------WFR----LHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHE 426
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.470e-51 Identity = 88/158 (55.70%), Postives = 113/158 (71.52%), Query Frame = 1
Query: 343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
MS +S ATFH+F ++FA E+Y +HIFLPTG Q+ M QY +LGF+GA GST VTH+ W C Y+ AR YTG EG+ T+AY TVDH++RVLAVT GF G+ NDK+I+ YD AV +IRE +Y +K F + DGT + +G YLLV+NGYHKW
Sbjct: 178 MSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKW 335
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.260e-50 Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 1
Query: 343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRG 855
MS +S + +TFH+FCK+FA ELY ++++LPTG MEQY ++GF GA+GST VTH+ W C Y+ AR YTG EG T+A+ TVDHS RVLAVT+GF GA NDKTI+ YDKAV RIR VY ++ + L ++DG E +G YLLV+NGYHKW P++ P RG
Sbjct: 194 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRG 365
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.830e-49 Identity = 84/170 (49.41%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 307 IGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
+G+G + +S MS+++ TFHKFC+HFA E++ +HI+LPTG + M +H+LG+TGA GST VTH+ W+ C ++L R +TG EGF TIAY TVDH R LAVT GF GA NDKTI+ YD V +IR Y ++ + LR +GT RG +L+V+NGYH+W
Sbjct: 44 LGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEW 213
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 176 bits (446), Expect = 1.740e-47 Identity = 83/158 (52.53%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 307 IGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRG 780
+G+G +S MS+ + ATFHKFCKHFA+EL+ +HI+LPTG+ Q+ M Y KLG TGAIGST VTH+ W C ++L R YTG EGF TIAY TVDH+ R +A+T GF GA NDKTIM YD V I+ Y + + LR DGT E +G
Sbjct: 11 LGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYDAGVHTIKTDAQYTKRTYKLRRADGTYRERKG 168
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 180 bits (457), Expect = 3.690e-47 Identity = 86/174 (49.43%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPT--GAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
T +G+G + +S MS + FH+FC+HFA E+Y +HIFLP+ + M QY KLGF GA+GST VTH+ W RC Y+ R YTG EG T+ Y TV+H+ RVLAVT+GF G+ NDKTI+ D+AV RIR + Y +K F + +DGT +G YL+V+NGYHKW
Sbjct: 133 TILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKW 306
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 178 bits (451), Expect = 6.220e-47 Identity = 83/174 (47.70%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQET--AMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
T +G+G +S MS + FHKFCKHFA E+Y +HI+LP+ E M+QY +LGF+GA+GS VTH+ W +C Y+LAR YTG EG T+ Y TV+H+ R +AVT+GF + NDKT + +D V++IR Y +K F + +EDGT +G YLLV+NGYHKW
Sbjct: 104 TILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW 277
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.740e-44 Identity = 89/202 (44.06%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPT--GAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYR----------------------------DKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
T +G+G MS MS + FHKFC+HFA E+Y + I LPT + M+QY +LGFTGA+GS VTH+ W RC Y+ AR YTG EGF TIAY TVDH+ R +AVT+GF G+ NDKTI+ +D AV++I + Y +K F + +EDGT +G YLLV+NGYHKW
Sbjct: 91 TILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10304.633.1 >prot_H-fluviatilis_contig10304.633.1 ID=prot_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=212bp MLQGGAASQSSSSTTDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEback to top mRNA from alignment at H-fluviatilis_contig10304:1709..4785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10304.633.1 ID=mRNA_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=3077bp|location=Sequence derived from alignment at H-fluviatilis_contig10304:1709..4785- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10304:1709..4785- >mRNA_H-fluviatilis_contig10304.633.1 ID=mRNA_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1272bp|location=Sequence derived from alignment at H-fluviatilis_contig10304:1709..4785- (Heribaudiella fluviatilis SAG_13_90)back to top |