mRNA_H-fluviatilis_contig10304.633.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10304.633.1
Unique NamemRNA_H-fluviatilis_contig10304.633.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 3.820e-69
Identity = 124/259 (47.88%), Postives = 165/259 (63.71%), Query Frame = 1
Query:  301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQET--AMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRGGGALEQNVRERA*GCGMLHWRPQGPVQDSQAARPLP-VGEDRQRVLHVLYSTQHATHIRRIGRTRGQRELG 1065
            T +G+G        MS MS A + A FH FCKHFA E+Y +HI+LP+    E    M+QY +LGF+GA+GS  VTH+ W++C Y+L R YTG EG  TI Y  TV+H+ R  AVT+GF G+ NDKTI+ +D AV++IR  + Y +K F + +EDGT    +G YLLV+NGYHKW      ++ PA+R    L +   ERA G GML   P+ P+QD +A   +P  G  RQRVLHVL+  QHA H+RR GR  G+  +G
Sbjct:  131 TILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHAAHLRRNGRAGGKHAMG 389          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.660e-51
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 1
Query:  343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRG 855
            MS +S   + +TFH+FCK+FA ELY ++++LPTG      MEQY ++GF GA+GST VTH+ W  C Y+ AR YTG EG  T+A+  TVDHS RVLAVT+GF GA NDKTI+ YDKAV RIR   VY ++ + L ++DG   E +G YLLV+NGYHKW     P++ P  RG
Sbjct:  103 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRG 274          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.750e-51
Identity = 110/254 (43.31%), Postives = 145/254 (57.09%), Query Frame = 1
Query:   79 CIHVQTSAR-HRGH*CRKKTCRTIRREMQEYFGGASASPPCSSEKLSSW*RIGSGLHL--PKRMLQGGAASQSSSSTTDIGQGQLLRRRD------PMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHK 813
            C   +TS R HR + CR+ T R  RR +                    W R    LH    +  L+G A +  ++ST  +   Q+L R +       +S MS+ +  ATFHKFCKHFA+EL+ +HI+LPTG+ Q+  M  Y KLG TGAIGST VTH+ W  C ++L R YTG EGF TIAY  TVDH+ R +A+T GF GA NDKTI+ YD  V  I+    Y  + + LR  DGT  E +G Y +V+NGYH+
Sbjct:  197 CTVTRTSHRWHRKYCCRRPTAREKRRTL--------------------WFR----LHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHE 426          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.470e-51
Identity = 88/158 (55.70%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
            MS +S     ATFH+F ++FA E+Y +HIFLPTG  Q+  M QY +LGF+GA GST VTH+ W  C Y+ AR YTG EG+ T+AY  TVDH++RVLAVT GF G+ NDK+I+ YD AV +IRE  +Y +K F +   DGT  + +G YLLV+NGYHKW
Sbjct:  178 MSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKW 335          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.260e-50
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 1
Query:  343 MSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPY-SPNEDPAKRG 855
            MS +S   + +TFH+FCK+FA ELY ++++LPTG      MEQY ++GF GA+GST VTH+ W  C Y+ AR YTG EG  T+A+  TVDHS RVLAVT+GF GA NDKTI+ YDKAV RIR   VY ++ + L ++DG   E +G YLLV+NGYHKW     P++ P  RG
Sbjct:  194 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRG 365          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.830e-49
Identity = 84/170 (49.41%), Postives = 115/170 (67.65%), Query Frame = 1
Query:  307 IGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
            +G+G      + +S MS+++   TFHKFC+HFA E++ +HI+LPTG   +  M  +H+LG+TGA GST VTH+ W+ C ++L R +TG EGF TIAY  TVDH  R LAVT GF GA NDKTI+ YD  V +IR    Y ++ + LR  +GT    RG +L+V+NGYH+W
Sbjct:   44 LGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEW 213          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 1.740e-47
Identity = 83/158 (52.53%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  307 IGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRG 780
            +G+G        +S MS+ +  ATFHKFCKHFA+EL+ +HI+LPTG+ Q+  M  Y KLG TGAIGST VTH+ W  C ++L R YTG EGF TIAY  TVDH+ R +A+T GF GA NDKTIM YD  V  I+    Y  + + LR  DGT  E +G
Sbjct:   11 LGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYDAGVHTIKTDAQYTKRTYKLRRADGTYRERKG 168          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 3.690e-47
Identity = 86/174 (49.43%), Postives = 114/174 (65.52%), Query Frame = 1
Query:  301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPT--GAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
            T +G+G +      +S MS   +   FH+FC+HFA E+Y +HIFLP+      +  M QY KLGF GA+GST VTH+ W RC Y+  R YTG EG  T+ Y  TV+H+ RVLAVT+GF G+ NDKTI+  D+AV RIR  + Y +K F +  +DGT    +G YL+V+NGYHKW
Sbjct:  133 TILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKW 306          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 6.220e-47
Identity = 83/174 (47.70%), Postives = 113/174 (64.94%), Query Frame = 1
Query:  301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPTGAAQET--AMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
            T +G+G        +S MS   +   FHKFCKHFA E+Y +HI+LP+    E    M+QY +LGF+GA+GS  VTH+ W +C Y+LAR YTG EG  T+ Y  TV+H+ R +AVT+GF  + NDKT + +D  V++IR    Y +K F + +EDGT    +G YLLV+NGYHKW
Sbjct:  104 TILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW 277          
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 4.740e-44
Identity = 89/202 (44.06%), Postives = 115/202 (56.93%), Query Frame = 1
Query:  301 TDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAEELYVKHIFLPT--GAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLARGYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIREHEVYR----------------------------DKIFHLRSEDGTLNECRGNYLLVNNGYHKW 816
            T +G+G        MS MS   +   FHKFC+HFA E+Y + I LPT      +  M+QY +LGFTGA+GS  VTH+ W RC Y+ AR YTG EGF TIAY  TVDH+ R +AVT+GF G+ NDKTI+ +D AV++I   + Y                             +K F + +EDGT    +G YLLV+NGYHKW
Sbjct:   91 TILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKW 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10304.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPI7_ECTSI3.820e-6947.88Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5KY50_9PHAE1.660e-5154.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCU6_9PHAE1.750e-5143.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE2.470e-5155.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.260e-5054.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.830e-4949.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH50_9PHAE1.740e-4752.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE3.690e-4749.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE6.220e-4747.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE4.740e-4444.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10304contigH-fluviatilis_contig10304:1709..4785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score157.1
Seed ortholog evalue8.8e-36
Seed eggNOG ortholog2880.D7FSK2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1653
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10304.633.1prot_H-fluviatilis_contig10304.633.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10304 2468..4527 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.8070707-UTR-H-fluviatilis_contig10304:1708..24671622929073.8070707-UTR-H-fluviatilis_contig10304:1708..2467Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10304 1709..2467 -
1691135172.6935651-UTR-H-fluviatilis_contig10304:1708..24671691135172.6935651-UTR-H-fluviatilis_contig10304:1708..2467Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10304 1709..2467 -
1622929073.857915-UTR-H-fluviatilis_contig10304:4527..47851622929073.857915-UTR-H-fluviatilis_contig10304:4527..4785Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10304 4528..4785 -
1691135172.7385883-UTR-H-fluviatilis_contig10304:4527..47851691135172.7385883-UTR-H-fluviatilis_contig10304:4527..4785Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10304 4528..4785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.818335-CDS-H-fluviatilis_contig10304:2467..25481622929073.818335-CDS-H-fluviatilis_contig10304:2467..2548Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 2468..2548 -
1691135172.7095382-CDS-H-fluviatilis_contig10304:2467..25481691135172.7095382-CDS-H-fluviatilis_contig10304:2467..2548Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 2468..2548 -
1622929073.8288424-CDS-H-fluviatilis_contig10304:3128..36451622929073.8288424-CDS-H-fluviatilis_contig10304:3128..3645Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 3129..3645 -
1691135172.7176497-CDS-H-fluviatilis_contig10304:3128..36451691135172.7176497-CDS-H-fluviatilis_contig10304:3128..3645Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 3129..3645 -
1622929073.8413546-CDS-H-fluviatilis_contig10304:4489..45271622929073.8413546-CDS-H-fluviatilis_contig10304:4489..4527Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 4490..4527 -
1691135172.728329-CDS-H-fluviatilis_contig10304:4489..45271691135172.728329-CDS-H-fluviatilis_contig10304:4489..4527Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10304 4490..4527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10304.633.1

>prot_H-fluviatilis_contig10304.633.1 ID=prot_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=212bp
MLQGGAASQSSSSTTDIGQGQLLRRRDPMSHMSEAIIGATFHKFCKHFAE
ELYVKHIFLPTGAAQETAMEQYHKLGFTGAIGSTGVTHVRWDRCKYSLAR
GYTGNEGFRTIAYHATVDHSRRVLAVTQGFAGAQNDKTIMSYDKAVQRIR
EHEVYRDKIFHLRSEDGTLNECRGNYLLVNNGYHKWDPYSPNEDPAKRGG
GALEQNVRERA*
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mRNA from alignment at H-fluviatilis_contig10304:1709..4785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10304.633.1 ID=mRNA_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=3077bp|location=Sequence derived from alignment at H-fluviatilis_contig10304:1709..4785- (Heribaudiella fluviatilis SAG_13_90)
AGTTGCTGGAGGAGGAGGATTCTATTAATGGGGAACAGGGCGATGACGAT GCTGCCCGTGTGAAGCGCACTTGGCGTGTGTATCCACGTGCAGACTTCAG CGCGGCACCGTGGTCATTAATGCCGAAAAAAGACCTGTCGGACCATACGT CGAGAGATGCAAGAATATTTCGGAGGCGCTTCCGCATCCCCCCCGTGTTC TTCAGAGAAATTGTCAAGTTGGTGAAGGATAGGAAGTGGTTTGCATCTGC CGAAAAGGATGTTGCAGGGCGGAGCTGCATCCCAATCGAGCTCAAGGTAT GCATGTATTCGATTTCGTGTCCGTGGTTGACGTCTGTGAAACCGTGGAGA AGAACCGGTACGCGAATTCTGGCATTGCCTGTGTACGTTGGATCCGCGGT CCGTACATACGGGATAGCATCACGACTACCCTGCTCAGAAGGAACATGTT TTCCCACCTGACCTTCACCGTTCTGTACCACAACGCCTTGCTGTTGTTTT ATGCAACCTATTGCTGAGTGCATATTGGAATCTTAGTTTCAGCCAGTGCA CAACACGGTTTTGACCATTCGAACCCACGCCATGAGATGGGGCAGCTGCG TTGTACAAGGGGTCACAAGCGGTGTGCTCCGCTGACGACTCTACCAGAGC TTACACGCCGTGGTAAAACCCCTGTTTGGTGTGCGCGGATATCCACGCCA ATATGATACCGGGTATCTGTAAATCTCAATGAAAGGCGAGCAAACAATTA CGGGGCTAGCATGTCGACCAAGCCGCGGAATTATCAATCGGTCTAGAGGC AGTACAGTCCCTGGCACGATCGGGCGAGCCTGTGTCTCCGAGCTCCACGG AGCCGGCATCAACGTTGTTCCCGACTGTAGCGTGCCTCTGCCGTGAATTT CAGCTTGTTGCCGATCGAATAGGACGTACGGCTGCAGTTGAAGCAGGGGC AGAGCCACGGTGAAATCAAGGAGTGCCCTTCGTTTTTACCCTTTGTGCAC GAGAAACTCCCACGTCATTTTTTTGTTCTCGAGTTACCACCGTACCGTTC GTACAGCCGTATGTACAATTTTGTCGAGGTGATCCAACATGAAAGCAACG TCGACGTGAACTTGCGCCCGTGCGTGGCTGGTTTTGGCAGCACTACAGAT ATTGGGCAGGGGCAACTGCTTCGACGACGTGATCCAATGTCGCACATGAG TGAGGCGATCATAGGTGCCACGTTCCACAAATTCTGCAAGCACTTTGCTG AGGAGCTTTACGTAAAGCACATATTTCTCCCGACCGGAGCTGCCCAGGAG ACGGCAATGGAGCAGTACCACAAGCTGGGGTTCACTGGAGCGATCGGGTC GACCGGTGTCACCCACGTGAGATGGGACCGCTGCAAGTACTCCCTCGCCC GTGGTTACACGGGAAACGAGGGCTTCCGAACGATCGCGTACCATGCGACA GTTGATCACTCCCGCCGAGTTCTGGCTGTCACCCAAGGCTTCGCGGGTGC TCAAAACGACAAAACGATCATGAGCTACGATAAGGCGGTGCAGCGGATCC GAGAGCACGAGGTGTATAGGGACAAGATTTTCCACCTTCGAAGCGAAGAC GGCACGCTGAACGAGTGCAGGGGAAACTACCTCCTCGTGAACAACGGGTA CCACAAGGTGGGACGGCAGAAATGGATCATAACGGTAGGAATGGACCGCG AGAACATCACCAAATGTGTGAACGTGGTTCGCACGACATTTGTATCCCCG AAATTTCTAAGGTTTTAGTCTGGCTGCTGCGGCTTCAAGCGAATTCGTGT GAAGGGGGTAAGTGGAAGAATCACGGCGTGATTCCTGTTTGGTTTCGTGT GTAATTCATGCTGACTTGATGGCCGCCAGCCTCCATATTACCTTTTCAAC GTTTGAATCATTTGGATGTTTCTTCACATGGCAATGGTGATGTTGACGGT GGCAAAGAGTTTAGCATTCCTCCATCTTGTTATTTTTTTCGCAAAGATTG ACTTCCTTTTGCTTCTCGACAACCAAGCACGGCAACCCGCAGCCCCACTC GCCCTGCACTTGTGTCAGTGATGCTGAAGATGCCACCTGTGGCGGAAACA CTTCCCTCTGGCACTTGGATCGCAGCAGCAGTTTACAACACTTGTCTCCT GCTGGCGGTAGAAGAGATTTCGCATCGAGAATTGGAAATGGACACCCGTA ACCTTCGCCCGTCTGTTGCTCTTTGTTAAACGTGCAGTGGGATCCTTATT CCCCCAACGAAGACCCCGCTAAGCGCGGAGGAGGCGCGCTGGAGCAAAAC GTTAGAGAGCGTGCGTAAGGATGTGGAATGCTTCATTGGCGTCCTCAAGG GCCGGTTCAGGATTCTCAAGCTGCCCGTCCTTTACCAGTAGGAGAGGATC GACAACGTGTTCTTCACGTGCTGTATTCTACACAACATGCTACACACATT CGACGGATCGGACGTACTCGAGGCCAACGCGAACTAGGCGGGGGTGGACG GTCTGCACGAAGCCTATATTGCCAACCCTCTCACCGATGTGAGCTTCGTC GGCGCTCGGAGCCGAAGCGTCAGCGAGAAGATCGAAATAGAATCGTTACA CCACGAGTTGAAACAGAAGTTGATCACTTCGTTCACTTGCCGCAAGCGAC ACGAAGACGTTGTTTGGCGAAGCCGATCAAATTAGGCAAATCTTGCTTCG TTTGGGTATCCTTTGTGTCTTACTTCGTTATCGCCGTTCGTCTTTTTCGG AGTTCGACGAATGGAGTCGGCGGAGCGGTGTCCTCGTTCCTCATGAGATG TTGGCACGGTATATTGGTATGACGCCGACCAGGGTTTATCGGCCATGGAC AAGTTTCGGGTTCCCAAACGCGGTCATTCTGACGCCGTCAAACTCTTTTG AACACGAAAAACCAAGATTTCAGGATGCCTTTTTCCTTCAGGATGAAACA GGGAAAACTTCAATCGCCTCCATACGCTCATAAAACATAGGTGTTTTTTT TTCGTTCTGAAGATGGGTTCCAATCCCCCAAACACAACACCGCCAAAGTT TGAGGTTACTGAGACTATACCTTGCCG
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10304:1709..4785-

>mRNA_H-fluviatilis_contig10304.633.1 ID=mRNA_H-fluviatilis_contig10304.633.1|Name=mRNA_H-fluviatilis_contig10304.633.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1272bp|location=Sequence derived from alignment at H-fluviatilis_contig10304:1709..4785- (Heribaudiella fluviatilis SAG_13_90)
ATGTTGCAGGGCGGAGCTGCATCCCAATCGAGCTCAAGATGTTGCAGGGC
GGAGCTGCATCCCAATCGAGCTCAAGCACTACAGATATTGGGCAGGGGCA
ACTGCTTCGACGACGTGATCCAATGTCGCACATGAGTGAGGCGATCATAG
GTGCCACGTTCCACAAATTCTGCAAGCACTTTGCTGAGGAGCTTTACGTA
AAGCACATATTTCTCCCGACCGGAGCTGCCCAGGAGACGGCAATGGAGCA
GTACCACAAGCTGGGGTTCACTGGAGCGATCGGGTCGACCGGTGTCACCC
ACGTGAGATGGGACCGCTGCAAGTACTCCCTCGCCCGTGGTTACACGGGA
AACGAGGGCTTCCGAACGATCGCGTACCATGCGACAGTTGATCACTCCCG
CCGAGTTCTGGCTGTCACCCAAGGCTTCGCGGGTGCTCAAAACGACAAAA
CGATCATGAGCTACGATAAGGCGGTGCAGCGGATCCGAGAGCACGAGGTG
TATAGGGACAAGATTTTCCACCTTCGAAGCGAAGACGGCACGCTGAACGA
GTGCAGGGGAAACTACCTCCTCGTGAACAACGGGTACCACAAGCACTACA
GATATTGGGCAGGGGCAACTGCTTCGACGACGTGATCCAATGTCGCACAT
GAGTGAGGCGATCATAGGTGCCACGTTCCACAAATTCTGCAAGCACTTTG
CTGAGGAGCTTTACGTAAAGCACATATTTCTCCCGACCGGAGCTGCCCAG
GAGACGGCAATGGAGCAGTACCACAAGCTGGGGTTCACTGGAGCGATCGG
GTCGACCGGTGTCACCCACGTGAGATGGGACCGCTGCAAGTACTCCCTCG
CCCGTGGTTACACGGGAAACGAGGGCTTCCGAACGATCGCGTACCATGCG
ACAGTTGATCACTCCCGCCGAGTTCTGGCTGTCACCCAAGGCTTCGCGGG
TGCTCAAAACGACAAAACGATCATGAGCTACGATAAGGCGGTGCAGCGGA
TCCGAGAGCACGAGGTGTATAGGGACAAGATTTTCCACCTTCGAAGCGAA
GACGGCACGCTGAACGAGTGCAGGGGAAACTACCTCCTCGTGAACAACGG
GTACCACAAGTGGGATCCTTATTCCCCCAACGAAGACCCCGCTAAGCGCG
GAGGAGGCGCGCTGGAGCAAAACGTTAGAGAGCGTGCGTAATGGGATCCT
TATTCCCCCAACGAAGACCCCGCTAAGCGCGGAGGAGGCGCGCTGGAGCA
AAACGTTAGAGAGCGTGCGTAA
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