mRNA_H-fluviatilis_contig10300.628.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: D8LGI2_ECTSI (Histone deacetylase superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI2_ECTSI) HSP 1 Score: 271 bits (692), Expect = 3.570e-88 Identity = 130/162 (80.25%), Postives = 141/162 (87.04%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRK 486
+A HG ERVAVVDIDVHHGNGTQA FE DPTTFYASTHQGP+FYPGTGFDDI GV NIVNVS+ G+GS FR AY+EKILPALE F+PGLIVISAGFDAH DDPLAG+TLD +DY WVT IC VA RVCGG+VVSILEGGYNL+AISDSAVAHV ALR+
Sbjct: 41 KAAHGIERVAVVDIDVHHGNGTQALFEEDPTTFYASTHQGPEFYPGTGFDDITGVQSNIVNVSMGDGEGSGGFRTAYTEKILPALEGFRPGLIVISAGFDAHVDDPLAGITLDEDDYRWVTERICDVAERVCGGRVVSILEGGYNLQAISDSAVAHVHALRQ 202
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A6H5KT92_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT92_9PHAE) HSP 1 Score: 268 bits (684), Expect = 2.200e-84 Identity = 130/162 (80.25%), Postives = 139/162 (85.80%), Query Frame = 1
Query: 4 AEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
A HG ERVAVVDIDVHHGNGTQA FE DPTT YASTHQGP+FYPGTGFDDI GV NI NVS+ G+GS FR AYSEKILPALE F+PGLIVISAGFDAH DDPLAG+TLD +DY WVT IC VA RVCGG+VVSILEGGYNL+AISDSAVAHV ALR+A
Sbjct: 256 AAHGVERVAVVDIDVHHGNGTQALFEEDPTTLYASTHQGPNFYPGTGFDDITGVHSNIFNVSMGDGEGSRGFRAAYSEKILPALEGFRPGLIVISAGFDAHVDDPLAGITLDEDDYRWVTERICDVAERVCGGRVVSILEGGYNLQAISDSAVAHVHALRQA 417
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A836CB28_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB28_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.080e-62 Identity = 104/159 (65.41%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 13 GAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
G ERVAVVD DVHHGNGTQA E P F+ASTH G FYPGTG +G KN++N+ G GS FR AY++ ILPAL F P ++ ISAGFDAHEDDPL M L A+D+GWVTREICAVA VC G+VVS LEGGYN EAIS SAVAHV+ALR A
Sbjct: 186 GFERVAVVDFDVHHGNGTQAGLEKLPYAFFASTHVGYGFYPGTGEAHERGKFKNVINMPFLEGTGSGDFRAAYADVILPALREFDPDIVFISAGFDAHEDDPLGEMELTADDFGWVTREICAVAADVCNGRVVSALEGGYNFEAISKSAVAHVQALRDA 344
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A522VAA4_9PROT (Histone deacetylase family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A522VAA4_9PROT) HSP 1 Score: 204 bits (518), Expect = 1.380e-62 Identity = 103/160 (64.38%), Postives = 118/160 (73.75%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRAL 480
+A HG +RVAVVD DVHHGNGTQ E DP FYASTHQ P YPGTG+ D GVA N+VNV L G GS FR A++ ++LPALE FQPGLI+ISAGFDAH DP+A + L+A DYGW TREI AVA RVC +VVS LEGGY+L A+ A HVRAL
Sbjct: 148 RAVHGIQRVAVVDWDVHHGNGTQHLMEDDPDFFYASTHQSP-LYPGTGWADETGVAGNVVNVPLPPGTGSQGFRAAFATRVLPALEEFQPGLILISAGFDAHISDPIANLRLEASDYGWATREILAVAGRVCRHRVVSALEGGYDLAALMACAAHHVRAL 306
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: UPI00146E0C3A (histone deacetylase family protein n=1 Tax=Sneathiella limimaris TaxID=1964213 RepID=UPI00146E0C3A) HSP 1 Score: 201 bits (511), Expect = 1.570e-61 Identity = 94/158 (59.49%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 7 EHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRAL 480
++G R+AV+D DVHHGNGTQ FE DP FY STHQ P FYPGTG+ + GV NIVNV L G GS AFR AY + +LPALE+F P L++ISAGFDAH DPLA + L+AEDY W+T+E+ ++ + C G+VVS+LEGGY+L +S+SA AHV+AL
Sbjct: 150 KYGLTRIAVIDFDVHHGNGTQHIFEKDPDLFYGSTHQSPPFYPGTGYANETGVG-NIVNVPLVEGSGSKAFRDAYKDTVLPALESFNPELLIISAGFDAHHLDPLANINLEAEDYTWITQELLKISEKCCEGRVVSLLEGGYDLTGLSESACAHVKAL 306
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: UPI00066273B5 (histone deacetylase family protein n=1 Tax=Acidisphaera rubrifaciens TaxID=50715 RepID=UPI00066273B5) HSP 1 Score: 197 bits (500), Expect = 3.330e-61 Identity = 99/159 (62.26%), Postives = 120/159 (75.47%), Query Frame = 1
Query: 13 GAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
GAERVAV+D DVHHGNGTQA F ADP FY S+HQ P YPGTG +GV NIVN L G GS FR A+++ ILPAL AF P LI++SAGFDAH+ DPLA + L+ D+GW+T EI AVA+ VC G++VS+LEGGY+L A++DSA AHVRAL +A
Sbjct: 51 GAERVAVLDFDVHHGNGTQAAFRADPALFYGSSHQFP-CYPGTGRASERGVG-NIVNAPLPPGSGSGTFRTAWADHILPALRAFGPDLIIVSAGFDAHKADPLAELLLETADFGWITTEILAVADAVCRGRLVSVLEGGYDLAALADSAAAHVRALMRA 207
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A1I4DEW9_9PROT (Acetoin utilization deacetylase AcuC n=3 Tax=Acetobacteraceae TaxID=433 RepID=A0A1I4DEW9_9PROT) HSP 1 Score: 200 bits (508), Expect = 4.460e-61 Identity = 101/163 (61.96%), Postives = 121/163 (74.23%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
QA HG ERV VVD DVHHGNGTQA FE D T FYAS+HQ P YPGTG GV NIVN L G AAFR A++E +LPALEAF+PG+I+ISAGFDAH DPLA + + D+ W+T E+C +A+R+CGGKVVS+LEGGY+LEA++ S AHVR L +A
Sbjct: 149 QAVHGVERVGVVDFDVHHGNGTQACFETDETLFYASSHQSP-CYPGTGEAHETGVG-NIVNAPLPPGADGAAFRAAWAETLLPALEAFRPGIIIISAGFDAHARDPLAQLRVREADFAWLTAELCRMADRLCGGKVVSLLEGGYDLEALAASTAAHVRTLMQA 309
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A7Y4WPW1_9PROT (Histone deacetylase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4WPW1_9PROT) HSP 1 Score: 200 bits (508), Expect = 4.460e-61 Identity = 98/163 (60.12%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
+A HG +R+AVVD DVHHGNGTQA FE DP FYAS+HQ P YPGTG +G A NIVN SL G GS FR+A+ +LPAL+AF P I+ISAGFDAH DPLA + L DY WVT ++CA+A C G+VVS LEGGY+L+A++DSA AHV+AL A
Sbjct: 148 RARHGLKRIAVVDFDVHHGNGTQAMFEEDPELFYASSHQMP-LYPGTGRPQERGRANNIVNASLDPGDGSHEFRQAWDNTVLPALDAFNPDFILISAGFDAHRRDPLANLNLVEADYAWVTEKLCAIAKAKCAGRVVSTLEGGYDLKALADSASAHVKALMAA 309
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A2S6TU16_9PROT (Histone deacetylase-like amidohydrolase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TU16_9PROT) HSP 1 Score: 199 bits (507), Expect = 6.320e-61 Identity = 100/160 (62.50%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRAL 480
+A H +RVAVVD DVHHGNGTQ FE D FYAS+HQ P YPGTG D G NI N+ + G+GSAAFR+ Y EKILPAL AF P L++ISAGFDAH+ DPLA ++L EDY WVT E+ AVA C GKVVS+LEGGYNLEA+++S AHVR L
Sbjct: 148 RARHRLDRVAVVDFDVHHGNGTQHMFEHDEGLFYASSHQWPA-YPGTGAADETGEFNNICNLQMAPGEGSAAFRKGYREKILPALRAFDPDLLLISAGFDAHDRDPLAQISLQTEDYAWVTGELLAVAGECCYGKVVSLLEGGYNLEALTESVQAHVRVL 306
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Match: A0A1S8D3E0_9PROT (Acetoin utilization protein n=10 Tax=Acetobacteraceae TaxID=433 RepID=A0A1S8D3E0_9PROT) HSP 1 Score: 199 bits (505), Expect = 8.220e-61 Identity = 100/163 (61.35%), Postives = 122/163 (74.85%), Query Frame = 1
Query: 1 QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDDIKGVAKNIVNVSLRHGQGSAAFRRAYSEKILPALEAFQPGLIVISAGFDAHEDDPLAGMTLDAEDYGWVTREICAVANRVCGGKVVSILEGGYNLEAISDSAVAHVRALRKA 489
Q HGA RVA++D DVHHGNGTQA FE DP+ F+AS+HQ P YPGTG +G+ NI+NV+L G FR A+SE+ILPA+E F PGLI++SAGFDAH DPLA + L D+ WVT EICAVA RVCGG+VVS+LEGGY+L+A++ S AHVRAL A
Sbjct: 134 QEVHGAGRVAILDFDVHHGNGTQAVFERDPSVFFASSHQMP-LYPGTGAASERGMG-NILNVALPPGAKGDEFRAAWSERILPAVEGFSPGLILVSAGFDAHARDPLAHLRLTEADFAWVTGEICAVARRVCGGRVVSMLEGGYDLDALARSVAAHVRALMDA 294 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10300.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10300.628.1 >prot_H-fluviatilis_contig10300.628.1 ID=prot_H-fluviatilis_contig10300.628.1|Name=mRNA_H-fluviatilis_contig10300.628.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=165bp QAEHGAERVAVVDIDVHHGNGTQAFFEADPTTFYASTHQGPDFYPGTGFDback to top mRNA from alignment at H-fluviatilis_contig10300:1440..2772+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10300.628.1 ID=mRNA_H-fluviatilis_contig10300.628.1|Name=mRNA_H-fluviatilis_contig10300.628.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1333bp|location=Sequence derived from alignment at H-fluviatilis_contig10300:1440..2772+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10300:1440..2772+ >mRNA_H-fluviatilis_contig10300.628.1 ID=mRNA_H-fluviatilis_contig10300.628.1|Name=mRNA_H-fluviatilis_contig10300.628.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=990bp|location=Sequence derived from alignment at H-fluviatilis_contig10300:1440..2772+ (Heribaudiella fluviatilis SAG_13_90)back to top |