mRNA_H-fluviatilis_contig10296.618.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 218 bits (554), Expect = 6.620e-64 Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1
Query: 1 LVVRATNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQWLLVEADANGDPLVGSEP--VLDMLMG-PQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
L +RATNEYGE+DK +L +Y L+MV+EPFR T +T G +S + W L AD G P + G PQ +V L +PGT Y L V+ ++G + G KV+CKYVRREIR L D DREAF DAM I+YT+PTDVGK YG +F NY+ +TAYH++ + ++CYH G+QFLTSHA+F L ERYLQMI+P VS+P+WDFMID
Sbjct: 20 LKLRATNEYGEYDKASLKMYGLDMVIEPFRSTTVTAEGMLI---DSPAHMYVWRLRYADQEGAPQNSGTAGDAWNCTTGKPQVTVELERPGTAYFLSVESVDENGRVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMID 231
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 208 bits (529), Expect = 5.790e-61 Identity = 105/196 (53.57%), Postives = 128/196 (65.31%), Query Frame = 1
Query: 49 LTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQWLLVEADANGDPLVGSEPVLDMLMGPQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
L Y L+MV+EPFRET L V G T S + W L A G + + GPQ +VTL PGTVY L V+E S+DG + A GR K +CKYVRREIR L D DREAF DAME +YT+PTD GK YG N+ NY + A H + ++CYH GMQFLTSHA+F L+ ERYLQMI+P VS+P+WD+MID
Sbjct: 10 LETYGLDMVIEPFRETTLAVEG----TNVSLSGRYSWRLQHASEQGITVEDDGDLWAHSGGPQATVTLDSPGTVYVLTVREVSEDGQVVAEGRVKASCKYVRREIRDLTDGDREAFLDAMETWYTLPTDAGKAKYGPNYSNYMSIAAIHGTDYKNFCYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVWDYMID 201
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A6H5KPW4_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.550e-54 Identity = 106/237 (44.73%), Postives = 140/237 (59.07%), Query Frame = 1
Query: 1 LVVRATNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGS------------------------AAPTENSAETSFQWLLVEADANGDPLVGSEPVLDM-LMGPQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
L ++ATNEYGE+D+ AL LY LEMVVEP R T +TV S + P +S+ + WLLV AD +G PL G P++D + GP +VTLT G Y L+V++ DG+L A R + CKYVRRE+R L DR FF AM FYTV + G+ YG F N + V AYH+S DYC+H+GM FL +HA+F L E LQ I+P+VS+P WD+M++
Sbjct: 130 LELKATNEYGEYDRGALALYGLEMVVEPHRATRITVSSSRPRRLPPSENSEVXXXXXXXXXXPSPPLSSSSPRRYYWLLVRADRSGAPLDGVTPLVDTKVAGPLATVTLTDAGEKYALLVQQVEADGSLIAEARVTITCKYVRRELRSLTGEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLE 364
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 183 bits (465), Expect = 4.280e-51 Identity = 101/235 (42.98%), Postives = 129/235 (54.89%), Query Frame = 1
Query: 49 LTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQWLLVEADANGDPLVGSEPVLDMLMGPQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRR---------------------------------------EIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
L Y L+MV+EPFR+T L V G+ S + W L +G + GPQ +VTL PGTVY L V+E S+DG + A R + +CKYVRR EIR+L D DREAFFDAM+ +YT+P VGK YG +F NY VTA H +++ ++CYH GMQFLTSHA+F L ERYLQMI+P VS+P+WD+MID
Sbjct: 10 LGTYGLDMVIEPFRKTTLAVEGNV-----SLSRRYVWQLQHGSNHGVTAKDAGDAWAYTGGPQATVTLDSPGTVYVLTVREVSEDGQVVAEARVEASCKYVRRFPLGACVQYLRVWRPFASGQPLTRPQHVPPLLLVSCDRREIRELTDRDREAFFDAMQTWYTIPNSVGKTTYGPDFSNYMPVTAIHGTEVQNFCYHQGMQFLTSHAAFDLTMERYLQMIDPTVSLPVWDYMID 239
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A6H5KMG1_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.210e-46 Identity = 101/229 (44.10%), Postives = 137/229 (59.83%), Query Frame = 1
Query: 7 VRATNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQ-----------------WLLVEADANGDPLVGSEPVLDMLMGPQ-TSVTLTKPGTVYDLVVKEYS-QDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
V ATNEYGE+D AL LY LEMVVEP R T +TV S P +E S + WLLV AD++G L P++D + +VTLT G Y L+V++ DGT+ A R ++CKYVRRE+R L DR FF AM FYTV + G+ LYG F++ + + AYH+++ DYC+H+GM FL +HA+F L E LQ I+P+VS+P WD+M++
Sbjct: 22 VNATNEYGEYDGEALALYGLEMVVEPHRATRITV-SSRLPLSEISEKSEKSPSPSPXXXXXXXXXXXWLLVRADSSGAALDDVTPLVDARGYDRFVTVTLTDAGEKYALLVQQVEGDDGTVVAEQRVTISCKYVRRELRGLTIADRTGFFAAMREFYTVSLEEGRALYGDGFYDAKLMAAYHNTR--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLE 247
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 149 bits (376), Expect = 2.380e-38 Identity = 85/193 (44.04%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 109 VGSAAPTENSAETSFQWLLVE-ADANGDPLVGSEPVLDMLMG-PQTSVTLTKPGTVYDLVVKE------YSQDGTL-------AAAGR--FKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
V A TE+ + + F W +VE + G P + + + G + SV TKPG VY L V+E S+DGT+ A GR KV+CK+VRRE+R L + DREAF DAME +Y V + G+ YG FF+Y+ + +YH + + +CYH G+QFLT+HA+F L+ ER LQ INPRVS+P WD+MI+
Sbjct: 34 VRGGADTESGSLSVFSWKVVELGEEEGGP---AATIFEEEEGRAEVSVEFTKPGGVYLLTVEERLRAGAVSRDGTVVLNAGETAVIGRATIKVSCKHVRRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLKSFCYHAGVQFLTAHAAFGLMLERSLQKINPRVSLPFWDYMIE 223
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A6H5JD30_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD30_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.100e-37 Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 313 AAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
AAA F + RREIR L + DREAF DAM+I+YTVPTDVGK YG +F NY+ +TAYH++ + ++CYH G+QFLTSHA+F L ERYLQMI+P VS+P+WDFM D
Sbjct: 3 AAAALFSLV---TRREIRDLTERDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQAITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMTD 107
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A6H5K6J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J7_9PHAE) HSP 1 Score: 120 bits (302), Expect = 3.020e-31 Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 328 FKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYCYHDGMQFLTSHASFTLVAERYLQMINPRVSIPIW 621
F V+C RREIR L D DREAF DAMEI+YTVPTD GK YG N+ +Y + A H + + YH GMQFLTSHA+F L+ ERYLQMI+P VS+P+W
Sbjct: 20 FLVSCN--RREIRDLTDRDREAFLDAMEIWYTVPTDGGKAKYGPNYSSYMSIAAIHGTDVETCSYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVW 115
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A7S3YHN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN7_HETAK) HSP 1 Score: 121 bits (304), Expect = 5.450e-30 Identity = 75/215 (34.88%), Postives = 117/215 (54.42%), Query Frame = 1
Query: 16 TNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQWLLVEADANGDPLVGSEPVLDMLMGPQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITD------YC--YHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
+N Y + + +L LYN VVEP+R T L + +++ T F W ++ D N +PL + LD + + S T G+ Y + V+ + + KV CKYVRREIR L D D+ F +A++IF+T+ ++ GK+LYG +FFNY+ +T H + + C +H G FLTSH + + ER LQ++ P V+ P WD++ D
Sbjct: 86 SNGYPQLE--SLHLYNFPFVVEPYRTTSLKIPEIFM---SASSTPFSWEIL--DENNNPLEVTS--LDATLSSEVSAVFTSAGSFYTIQVEGNG------LSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLATVPSGTGGGAACSPWHSGPGFLTSHLALARLVERALQLVEPSVAAPYWDYVAD 285
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Match: A0A7S3XY60_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY60_HETAK) HSP 1 Score: 119 bits (297), Expect = 2.270e-27 Identity = 72/222 (32.43%), Postives = 113/222 (50.90%), Query Frame = 1
Query: 1 LVVRATNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSFQWLL---------VEADANGDPLVGSEPVLDMLMGPQTSVTLTKPGTVYDLVVKEYSQDGTLAAAGRFKVACKYVRREIRKLKDHDREAFFDAMEIFYTVPTDVGKQLYGSNFFNYERVTAYHDSKITDYC-YHDGMQFLTSHASFTLVAERYLQMINPRVSIPIWDFMID 636
+V+ +N+Y + +Y E +VEP+R T LT+ T + T QW + VE + NG +V TKPG Y + ++E +G ++KV CKYVRREIR L + DRE +F A+E ++ + + G+QLYG F N + +T H + I D +H G F+ +H +F E+ LQ+I P +SIP W++++D
Sbjct: 106 VVLEISNDYPPLHD-STKMYGWEFIVEPYRRTTLTIRS----TNSDPSTKHQWTVFLDENPHEHVEIEDNGQSVV--------------QAMFTKPGRFYHVHIEESDSNGNTNVF-KYKVICKYVRREIRSLHEEDREKYFSALEAYHRLSMEEGQQLYGMTFHNAKDLTIRHLAVIEDCSPWHGGANFVPTHFAFVARLEQVLQLIEPSISIPYWNYVLD 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10296.618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10296.618.1 >prot_H-fluviatilis_contig10296.618.1 ID=prot_H-fluviatilis_contig10296.618.1|Name=mRNA_H-fluviatilis_contig10296.618.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=212bp LVVRATNEYGEFDKVALTLYNLEMVVEPFRETVLTVVGSAAPTENSAETSback to top mRNA from alignment at H-fluviatilis_contig10296:7021..8064+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10296.618.1 ID=mRNA_H-fluviatilis_contig10296.618.1|Name=mRNA_H-fluviatilis_contig10296.618.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1044bp|location=Sequence derived from alignment at H-fluviatilis_contig10296:7021..8064+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10296:7021..8064+ >mRNA_H-fluviatilis_contig10296.618.1 ID=mRNA_H-fluviatilis_contig10296.618.1|Name=mRNA_H-fluviatilis_contig10296.618.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1272bp|location=Sequence derived from alignment at H-fluviatilis_contig10296:7021..8064+ (Heribaudiella fluviatilis SAG_13_90)back to top |