mRNA_H-fluviatilis_contig102943.616.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A7S1LVJ3_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LVJ3_ALECA) HSP 1 Score: 67.0 bits (162), Expect = 1.840e-12 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 2
Query: 20 GSREDALF-----LLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGTGQ 214
GSRE+ +LD I T LF EF+LK +AWG + RSY R+ WNWLDFVV++ + FIPG
Sbjct: 25 GSREETWNWLVDNVLDRILTVLFTQEFILKVIAWGF-FLDKRSYLRELWNWLDFVVVITALVSFIPGMDS 93
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A813G2J2_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2J2_POLGL) HSP 1 Score: 64.3 bits (155), Expect = 2.790e-10 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 2
Query: 2 SNHIGIGSREDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGT 208
S+ G G A ++D I T F LEFVLK +A+G + +SY RD WNWLDFVV+V I +IPG
Sbjct: 126 SDDNGSGFNWVANTVIDPILTGFFTLEFVLKVIAFGF-FLDQKSYLRDAWNWLDFVVVVTANITYIPGV 193
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: L1IFM0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IFM0_GUITC) HSP 1 Score: 63.9 bits (154), Expect = 3.850e-10 Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 2
Query: 26 REDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGTG 211
D L I++A FILEFV K +A G + GP +Y RD WNWLD +V++ C+ F+P +
Sbjct: 322 HRDFLDFSSKIFSAFFILEFVAKIIALGFM-VGPNTYLRDAWNWLDLLVVIIGCLDFMPSSN 382
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 2.140e-8 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 2
Query: 26 REDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPG 205
R LF +A++TA F LEFVLK +A G + G SY RD WN LDF+V+V + IPG
Sbjct: 106 RNALLFESEAVFTAFFTLEFVLKVIAQGF-YLGRGSYLRDSWNILDFMVVVTALMTSIPG 164
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: L1IVS0_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IVS0_GUITC) HSP 1 Score: 58.9 bits (141), Expect = 2.240e-8 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 2
Query: 29 EDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGTGQ 214
++ L + + I+TALF E V+K +A G V +Y RDGWNW+DFVV++ I +PG Q
Sbjct: 198 QNVLQVFEYIFTALFTAEMVVKIIARGFV-LHKHAYLRDGWNWIDFVVVICGLISLVPGLIQ 258
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 2.240e-8 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 2
Query: 26 REDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPG 205
R LF +A++TA F LEFVLK +A G + G SY RD WN LDF+V+V + IPG
Sbjct: 106 RNALLFESEAVFTAFFTLEFVLKVIAQGF-YLGRGSYLRDSWNILDFMVVVTALMTSIPG 164
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A7S0HKR1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HKR1_9CRYP) HSP 1 Score: 58.5 bits (140), Expect = 3.050e-8 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 2
Query: 26 REDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGT 208
D L I++ FILEF+ K +A G V+ G +Y RD WNWLD +V++ C+ F+P +
Sbjct: 313 HRDFLDFSSKIFSLFFILEFLAKTIALG-VFVGRNTYLRDAWNWLDLLVVIIGCLDFMPSS 372
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A7S4DBJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBJ0_HETAK) HSP 1 Score: 56.6 bits (135), Expect = 4.700e-8 Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 2
Query: 26 REDALFLLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFI 199
R + L + + I++A+FILE VLK A+G + G +Y RDGWN LDFVV+V ++F+
Sbjct: 18 RNNLLDVTEYIFSAVFILECVLKVCAYGFI-LGKNTYLRDGWNCLDFVVVVAGLVEFV 74
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: G0QTB6_ICHMG (EF-hand domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QTB6_ICHMG) HSP 1 Score: 57.4 bits (137), Expect = 7.810e-8 Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 2
Query: 44 LLDAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGTGQ 214
L D I+T +F+LE +LK +A+G + GP SYFR N LDF +++F F Q
Sbjct: 1087 LFDKIFTCIFVLEMILKIIAYGAFFNGPNSYFRQSQNILDFFIVIFSLFTFFDSIKQ 1143
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Match: A0A8J2E4L1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2E4L1_9DINO) HSP 1 Score: 57.4 bits (137), Expect = 7.820e-8 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 2
Query: 14 GIGSREDALFLL----DAIYTALFILEFVLKAVAWGLVWCGPRSYFRDGWNWLDFVVIVFCCIQFIPGT 208
G G ED+L L D ++ +FILE LK +++GL+ G ++Y RD WNWLDF+V++ I F+ T
Sbjct: 293 GCGRDEDSLNKLIDIADPVFLCIFILECGLKIISYGLIQ-GKKTYLRDSWNWLDFIVVLTGIITFVLET 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102943.616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102943.616.1 >prot_H-fluviatilis_contig102943.616.1 ID=prot_H-fluviatilis_contig102943.616.1|Name=mRNA_H-fluviatilis_contig102943.616.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=76bp QQSHWDRLARGRAVSAGRHLHGALHPRVCAESGGVGPSVVRTALLLSRRLback to top mRNA from alignment at H-fluviatilis_contig102943:385..760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102943.616.1 ID=mRNA_H-fluviatilis_contig102943.616.1|Name=mRNA_H-fluviatilis_contig102943.616.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=376bp|location=Sequence derived from alignment at H-fluviatilis_contig102943:385..760- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102943:385..760- >mRNA_H-fluviatilis_contig102943.616.1 ID=mRNA_H-fluviatilis_contig102943.616.1|Name=mRNA_H-fluviatilis_contig102943.616.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=456bp|location=Sequence derived from alignment at H-fluviatilis_contig102943:385..760- (Heribaudiella fluviatilis SAG_13_90)back to top |