mRNA_H-fluviatilis_contig102910.609.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig102910.609.1
Unique NamemRNA_H-fluviatilis_contig102910.609.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6A7MBU6_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MBU6_9PROT)

HSP 1 Score: 307 bits (787), Expect = 1.810e-94
Identity = 165/275 (60.00%), Postives = 206/275 (74.91%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGV-FHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEA-------QLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            RY ++F AN YPMVV+D +S  ++A+NDAA+ +YGWSREE +   +DDFYPPEDL  + A+R+     V    + GLRHR +DG+V ++E+    +EL G+PA+LT ++NV+ R+  E        QLRQ+QKMEAVGQLTGGIAHDFNNIL VI ANA+ L EE+ + AAVA RL QI +AV RAS LTRQLLAFSRKQ L P++TD+N LV+ TG+LLRR LG ++EIES LADGL   NIDR QLE+ALVNLCINARDAMP GG+L I T N
Sbjct:  454 RYRMLFDANAYPMVVIDRQSRDILAINDAAVAQYGWSREEALTMTSDDFYPPEDLAKVTALRQQDQIRVGVGTITGLRHRTRDGSVIDLELSASKIELAGRPALLTTIQNVTERNRAEKARLAVAEQLRQSQKMEAVGQLTGGIAHDFNNILTVILANADALQEEENLDAAVAGRLDQIGQAVERASGLTRQLLAFSRKQPLSPKRTDINALVTTTGKLLRRALGEQVEIESALADGLWAVNIDRGQLETALVNLCINARDAMPGGGKLRIATSN 728          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A521QXY8_9HYPH (Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QXY8_9HYPH)

HSP 1 Score: 278 bits (710), Expect = 4.450e-84
Identity = 146/273 (53.48%), Postives = 194/273 (71.06%), Query Frame = 1
Query:    4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            Y  +FQA PY ++V D +S+RL+AVNDAA+++YGWSREE++     DFY PEDL  L   +++  S    ++K +RHR+KDGT  +VEM  R LE DG+PA L +M +VS        R + E QLR +Q+++ VG+LTGG+AHDFNNIL VI AN + + + + +++   + + +I  A  RA+ LTRQLLAFSRKQTLRPQ+ +LNDLV  TG LLRRTLG  IE+ SVLAD L   N DR Q+E+A++NLCINARDAMP GGRL+I T N
Sbjct:  356 YRTLFQAAPYAIIVKDRDSHRLIAVNDAAVKQYGWSREEMLAMTMKDFYAPEDLQELADSQRSYSSEHSSLLKNVRHRRKDGTFIDVEMAVRLLEYDGRPATLAVMSDVSDRLRGERERVAAEEQLRASQRLDVVGKLTGGVAHDFNNILMVIMANVDAVLDAEDVASETRRSIERIGGAAERAAQLTRQLLAFSRKQTLRPQKINLNDLVVATGTLLRRTLGEHIEMNSVLADDLWETNADRSQVEAAIINLCINARDAMPGGGRLLIRTGN 628          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6N6ZS54_9PROT (Histidine kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZS54_9PROT)

HSP 1 Score: 268 bits (684), Expect = 2.050e-78
Identity = 139/273 (50.92%), Postives = 191/273 (69.96%), Query Frame = 1
Query:    4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            Y  +FQA PY ++V + +++RL+AVNDAA+++YGWSREE++     DFY  +DL A+ A  ++       ++  +RHR+KDGT+ +VEM  R LE  G+PA L ++ +VS        R + E QLR +Q+++ VG+LTGG+AHDFNNIL VI AN + + +   ++    Q + +I  A  RA+ LTRQLLAFSRKQTLRP++ DLNDLV  TG LLRRTLG  IEI S+LA+ L   N DR Q+E+A++NLC+NARDAMP+GGRL I TRN
Sbjct:  894 YRTLFQAAPYAIIVKERDTHRLIAVNDAAVKQYGWSREEMLTMTMSDFYAADDLRAVTARERSYSGDSTALLTDIRHRRKDGTLIDVEMAVRLLEYGGRPATLAVISDVSDRVRGERARVATEEQLRASQRLDVVGKLTGGVAHDFNNILMVIMANVDAILDVPDVAPETRQSIERIGGAAERATQLTRQLLAFSRKQTLRPEKIDLNDLVVATGSLLRRTLGEHIEINSLLAEELWETNTDRGQVEAAIINLCLNARDAMPEGGRLFIRTRN 1166          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A259MS76_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MS76_9PROT)

HSP 1 Score: 263 bits (672), Expect = 5.750e-78
Identity = 145/274 (52.92%), Postives = 189/274 (68.98%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            RY  +F+A PY  +V D E+ R++A NDAA+  YG SR+E++   A+DFY P D PA+   R+   + V  +++G+RHR+++G++  VEM  R +E   + A LTI+ +V         R   E QLRQAQKME VGQLTGGIAHDFNN+L VI AN +E+ EE+G+   V  RL QI +AV RA+ LT QLLAFSRKQ L P+ TDLNDLV+ TG+LLRRTLG  IE    LA  L   +IDR QLE+AL+NLC+NARDA P GGR+ I++RN
Sbjct:  463 RYRTLFEAAPYAALVTDRETLRVLAANDAAVTLYGRSRDELLALTAEDFYVPGDRPAMTRRRRDFSADVTTVLQGVRHRRRNGSLMSVEMAVRLIEYQHRAAALTIVTDVGGRLRTEEARKVAEEQLRQAQKMEVVGQLTGGIAHDFNNLLTVILANTDEVQEEEGLDPRVKARLEQIAKAVLRAAELTSQLLAFSRKQALTPKATDLNDLVTTTGKLLRRTLGGHIEFIVDLAADLWPVDIDRAQLETALINLCVNARDATPGGGRMFIQSRN 736          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A521LLF1_9HYPH (Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LLF1_9HYPH)

HSP 1 Score: 263 bits (671), Expect = 2.330e-77
Identity = 143/274 (52.19%), Postives = 188/274 (68.61%), Query Frame = 1
Query:    4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAM-RKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVR-------HSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            Y  +F  NP PM V D ++ R +AVNDA + +YGW+REE +     D   PED+  L A+ R+ P   V  I    RHR+KDG++ EVE+   A+E +G+PA+L +  +++ R       H+ E +LRQ QKMEAVGQLTGG+AHDFNNIL V+ AN + L ++  +  AV + +  I  A  RA+ LTRQLLAFSRKQ LRPQ TD+NDLV  TG LLRRTLG ++E +SVLA+ L    IDR QLE+AL+NLC+N+RDAMP GGRL++ETRN
Sbjct:  546 YRTLFDGNPDPMAVFDRDTRRYLAVNDAMVRQYGWTREEFLKMTPADLRLPEDMHMLDALLREGPPDPVRRIYG--RHRRKDGSIVEVEVSFAAVEFEGRPALLPMARDITERKRAEREHHASEEKLRQLQKMEAVGQLTGGVAHDFNNILMVMMANTDSLEDDYDLPPAVREHVANIARATRRAADLTRQLLAFSRKQPLRPQVTDVNDLVVATGRLLRRTLGEQVETDSVLAENLWPVAIDRAQLETALLNLCVNSRDAMPGGGRLLVETRN 817          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6A7LYH5_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LYH5_9PROT)

HSP 1 Score: 247 bits (630), Expect = 5.910e-73
Identity = 149/391 (38.11%), Postives = 201/391 (51.41%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRH----------------------------------------------------------------------------------------------------------------------------SVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            RY  +F A+P+  +V+D ++ RL+  N+ A+ +YGWSREE++   ++DFYPPEDLPA+ A R+  ++   H+V  LRHRKKDGT+ +VE     +E  G+PA+L    +V+ R+                                                                                                                            S+EAQL+QAQKMEAVGQLTGGIAHDFNNI+ V+ AN + L E++ ++ ++ +R+G I +A+GRA+ LTR LLAFSRK  LRPQ  DLN LV + G LLRRTLG +IEIES+L D L    +DR Q E+ALVNLC+NARDAMP+GGRL+IET N
Sbjct:  160 RYRQLFDASPFFTIVVDRQTLRLLDANETAVRQYGWSREELLAMTSNDFYPPEDLPAVIAARERYMTDPAHVVPPLRHRKKDGTIIDVEQTVHPIEYRGRPALLVTANDVTARNRIVKELRESEQKYQALVEALPVGILETTADGRIVTANAAWRRMFGFADDEDLSKVDVQTLYADPRDRRAVMEALRTEGAPPTEAVFRRRGGTLFSVERYLRTVRNAEGEIVALRGIVIDIGPRKSLEAQLQQAQKMEAVGQLTGGIAHDFNNIMMVMMANVDALEEDQDLTPSIRRRVGHISKAIGRATDLTRSLLAFSRKLPLRPQSIDLNALVVNIGRLLRRTLGTQIEIESMLDDDLWPVEVDRGQFENALVNLCLNARDAMPEGGRLLIETAN 550          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A1H8TGR4_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8TGR4_9PROT)

HSP 1 Score: 234 bits (596), Expect = 5.430e-68
Identity = 145/392 (36.99%), Postives = 193/392 (49.23%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLT-----------------------------------------------------------------------------------------------------------------------------IMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            RY  +F  +P  MVV+D ++ R++  N+A + +YGWS EE++   ++DFYPPEDLP + A R+  ++    +V  LRHRKKDGT+ +VE     ++ DGKPA+L                                                                                                                              I+ +++ R S+EAQL QAQKMEAVGQLTGG+AHDFNNIL ++ A  + L EEK +S A  +R+ QI  A+ +AS LTR LLAFS K  L PQ+ DLN LV D G LL+RTLG ++EIES+L   L    +DR QLE+ALVNLC+NARDAMP GGR++IETRN
Sbjct:  178 RYRRLFNVSPVLMVVLDRQTRRVLDANEATVRQYGWSHEELLTMSSNDFYPPEDLPDVLAQRERFMADPNRVVPPLRHRKKDGTIIDVEQTILPIDYDGKPALLVTANDVTERNRAMRELRESEQRYQALVETLPVGVLETTTDGRIVTANLAWRHMFGFGDDEDLGKLDVRDLYANPDDRGAVVQLVQAEGAIPATESVFRRRDGTIFPVERYLRSVRDETGMVTSLRGIVIDITQRKSLEAQLHQAQKMEAVGQLTGGVAHDFNNILMIVMAGVDALEEEKSLSQAARRRVDQISRAIDKASDLTRSLLAFSHKLPLLPQRVDLNALVLDVGRLLQRTLGTQVEIESMLGKDLWPVEVDRGQLENALVNLCVNARDAMPDGGRVLIETRN 569          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V8SIG2_9BACT (Hybrid sensor histidine kinase/response regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8SIG2_9BACT)

HSP 1 Score: 223 bits (568), Expect = 6.600e-66
Identity = 124/272 (45.59%), Postives = 173/272 (63.60%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPAL-----QAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            RY L+F+ NP+PM V D E+ R +AVN+AA+  YG+SREE +     D  PPED+PAL     +   +   +GV+      RHRKKDG V +VE+ +  L   G+ A + +  +V+ R  +E QLRQ+QKMEAVGQL GG+AHDFNN+L  I+  ++           +   + +I++A  RA+ALTRQLLAFSRKQ L+P+  DLN +VS+  ++LRR +G ++E  + LA  L     D  Q+E  L+NLC+NARDAMP GG L +ET N
Sbjct:   38 RYRLLFENNPHPMWVYDLETLRFLAVNEAAVRHYGYSREEFLTMTIKDIRPPEDVPALLENITRIGEELDKAGVW------RHRKKDGGVIDVEITSHTLVFAGRRAEVVLANDVTERKMLEEQLRQSQKMEAVGQLAGGVAHDFNNLLTAITGYSDLAIRRLKAEDPLRHHIEEIKKAGERAAALTRQLLAFSRKQVLQPKVLDLNAVVSEMEKMLRRLIGEDVEFRTALASDLGSIKADPGQIEQVLLNLCVNARDAMPGGGNLTVETSN 303          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V7L6F2_9BACT (Hybrid sensor histidine kinase/response regulator (Fragment) n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7L6F2_9BACT)

HSP 1 Score: 223 bits (568), Expect = 8.580e-66
Identity = 123/267 (46.07%), Postives = 165/267 (61.80%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
            +Y  +F+  PYPM V D E++RL+AVN AA+  YG+ REE +    +D   PED+PAL+    T  +G +H     RHRKKDGT+ EV+     +   G+ A L ++++V+ R  +E Q RQAQKMEAVG+L  G+AHDFNN+L  I    + + E+        + L  I  A  RA+ LTRQLL FSR+Q + P+   LN+L++D  +LLRR LG ++ I S LA        D  QLE  LVNL +NARDAMP GGRL IETRN
Sbjct:  141 QYRALFENTPYPMWVFDLETHRLLAVNSAAIAHYGYRREEFLALKIEDLRAPEDIPALEQHLATKEAG-YHTTGPWRHRKKDGTLIEVQTSGHEITFAGRRAELVVIDDVTERKRLEEQFRQAQKMEAVGRLAAGVAHDFNNLLTAILGTTDLMIEDLPADDPDREGLLDIRGAAERAAVLTRQLLTFSRQQVVSPRMLRLNELITDLVKLLRRLLGEDVTIASALAPDCGAVKADPGQLEQVLVNLAVNARDAMPNGGRLTIETRN 406          
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V7V0F9_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7V0F9_9BACT)

HSP 1 Score: 228 bits (581), Expect = 8.150e-65
Identity = 125/268 (46.64%), Postives = 171/268 (63.81%), Query Frame = 1
Query:    1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQ---AMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIET 795
            +Y L+F +NP+PM V D E+   +AVNDAA+  YG+SREE       D  P  D+P L+   A R+      F   +  RHRKKD  V +VE+ +  +   G+P  L +  +V+ +  +EAQL QAQKME+VG+L GG+AHDFNN+L VI+   + L  E G       R+ +I +A  RA+ LTRQLLAFSRKQ L P   DLN +VSDT  +LRR +G ++++ +VLA GL     DR QLE  +VN+ +NARDAMP+GG+L+IET
Sbjct:  552 QYRLLFDSNPHPMWVYDDETLAFLAVNDAAVRHYGYSREEFSAMTLRDIRPASDVPVLEEQVARRREAAREPFSSPRVWRHRKKDAAVIDVEISSSPITFRGRPGWLALAADVTEKKRLEAQLLQAQKMESVGRLAGGVAHDFNNLLGVITGYGDLLQREIGPEHPGFHRVEEIRKAAERAAVLTRQLLAFSRKQVLEPTVLDLNVVVSDTENMLRRLIGEDVQLVTVLAGGLGRVKGDRGQLEQVIVNMAVNARDAMPQGGKLIIET 819          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7MBU6_9PROT1.810e-9460.00Histidine kinase n=1 Tax=Rhodospirillales bacteriu... [more]
A0A521QXY8_9HYPH4.450e-8453.48Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929... [more]
A0A6N6ZS54_9PROT2.050e-7850.92Histidine kinase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A259MS76_9PROT5.750e-7852.92Histidine kinase n=1 Tax=Rhodospirillales bacteriu... [more]
A0A521LLF1_9HYPH2.330e-7752.19Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929... [more]
A0A6A7LYH5_9PROT5.910e-7338.11Histidine kinase n=1 Tax=Rhodospirillales bacteriu... [more]
A0A1H8TGR4_9PROT5.430e-6836.99Histidine kinase n=1 Tax=Rhodospirillales bacteriu... [more]
A0A2V8SIG2_9BACT6.600e-6645.59Hybrid sensor histidine kinase/response regulator ... [more]
A0A2V7L6F2_9BACT8.580e-6646.07Hybrid sensor histidine kinase/response regulator ... [more]
A0A2V7V0F9_9BACT8.150e-6546.64Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig102910contigH-fluviatilis_contig102910:2..802 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score210.7
Seed ortholog evalue8.5e-52
Seed eggNOG ortholog234267.Acid_5176
KEGG koko:K02482,ko:K07711,ko:K14986
KEGG Pathwayko02020,ko02024,map02020,map02024
KEGG ModuleM00502,M00524
EggNOG free text desc.histidine kinase A domain protein domain protein
EggNOG OGs3Y64H@57723,COG0784@1,COG0784@2,COG2202@1,COG2202@2,COG4191@1,COG4191@2,COG5002@1,COG5002@2,COG5278@1,COG5278@2
EC2.7.13.3
COG Functional cat.T
Best tax levelAcidobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Hectar predicted targeting categoryother localisation
Exons1
Model size801
Cds size801
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929071.131742-CDS-H-fluviatilis_contig102910:1..8021622929071.131742-CDS-H-fluviatilis_contig102910:1..802Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig102910 2..802 +
1691135171.712225-CDS-H-fluviatilis_contig102910:1..8021691135171.712225-CDS-H-fluviatilis_contig102910:1..802Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig102910 2..802 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig102910.609.1prot_H-fluviatilis_contig102910.609.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig102910 2..802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig102910.609.1

>prot_H-fluviatilis_contig102910.609.1 ID=prot_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=267bp
RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFY
PPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGK
PAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISAN
AEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTD
LNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCIN
ARDAMPKGGRLVIETRN
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mRNA from alignment at H-fluviatilis_contig102910:2..802+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig102910.609.1 ID=mRNA_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=801bp|location=Sequence derived from alignment at H-fluviatilis_contig102910:2..802+ (Heribaudiella fluviatilis SAG_13_90)
CGCTACGCTCTCATATTCCAGGCCAATCCCTATCCGATGGTCGTAATGGA CAGCGAATCCTACCGCCTGGTCGCCGTTAACGACGCCGCACTCGAGGAGT ATGGCTGGTCGCGGGAGGAAGTCGTCGGAAAGCTGGCCGACGACTTCTAT CCGCCGGAGGATCTGCCGGCACTGCAAGCCATGCGGAAGACGCCTGTCTC CGGAGTTTTCCACATCGTGAAAGGGTTACGTCATCGCAAGAAGGACGGAA CTGTTTTCGAGGTCGAGATGCACACGCGTGCGCTCGAGCTGGACGGCAAG CCCGCGATGCTGACGATCATGGAGAATGTCAGCGTTCGGCATTCGGTCGA AGCGCAGCTGCGACAGGCACAGAAGATGGAAGCCGTGGGCCAGCTGACCG GCGGCATCGCGCACGACTTCAACAATATTCTTTTCGTCATCAGCGCCAAC GCCGAGGAGCTCGCCGAAGAGAAGGGAATTTCCGCTGCCGTGGCGCAACG ACTGGGCCAGATCGAGGAAGCGGTTGGGAGGGCGAGCGCCCTGACGCGTC AGCTGCTGGCCTTCTCCCGCAAGCAGACGCTGCGTCCACAGCAAACCGAC CTCAACGATCTCGTGTCCGACACCGGCGAGTTGCTGCGCCGTACATTGGG CGCGGAGATCGAGATCGAATCCGTTCTCGCCGACGGGCTGTGCATCGCCA ACATCGACCGACCTCAGCTCGAATCCGCCCTGGTCAATCTCTGCATCAAC GCCCGGGATGCGATGCCCAAGGGCGGCCGGCTGGTGATCGAGACCCGCAA C
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Coding sequence (CDS) from alignment at H-fluviatilis_contig102910:2..802+

>mRNA_H-fluviatilis_contig102910.609.1 ID=mRNA_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1602bp|location=Sequence derived from alignment at H-fluviatilis_contig102910:2..802+ (Heribaudiella fluviatilis SAG_13_90)
CGCTACGCTCTCATATTCCAGGCCAATCCCTATCCGATGGTCGTAATGGA
CAGCGAATCCTACCGCCTGGTCGCCGTTAACGACGCCGCACTCGAGGAGT
ATGGCTGGTCGCGGGAGGAAGTCGTCGGAAAGCTGGCCGACGACTTCTAT
CCGCCGGAGGATCTGCCGGCACTGCAAGCCATGCGGAAGACGCCTGTCTC
CGGAGTTTTCCACATCGTGAAAGGGTTACGTCATCGCAAGAAGGACGGAA
CTGTTTTCGAGGTCGAGATGCACACGCGTGCGCTCGAGCTGGACGGCAAG
CCCGCGATGCTGACGATCATGGAGAATGTCAGCGTTCGGCATTCGGTCGA
AGCGCAGCTGCGACAGGCACAGAAGATGGAAGCCGTGGGCCAGCTGACCG
GCGGCATCGCGCACGACTTCAACAATATTCTTTTCGTCATCAGCGCCAAC
GCCGAGGAGCTCGCCGAAGAGAAGGGAATTTCCGCTGCCGTGGCGCAACG
ACTGGGCCAGATCGAGGAAGCGGTTGGGAGGGCGAGCGCCCTGACGCGTC
AGCTGCTGGCCTTCTCCCGCAAGCAGACGCTGCGTCCACAGCAAACCGAC
CTCAACGATCTCGTGTCCGACACCGGCGAGTTGCTGCGCCGTACATTGGG
CGCGGAGATCGAGATCGAATCCGTTCTCGCCGACGGGCTGTGCATCGCCA
ACATCGACCGACCTCAGCTCGAATCCGCCCTGGTCAATCTCTGCATCAAC
GCCCGGGATGCGATGCCCAAGGGCGGCCGGCTGGTGATCGAGACCCGCAA
CCGCTACGCTCTCATATTCCAGGCCAATCCCTATCCGATGGTCGTAATGG
ACAGCGAATCCTACCGCCTGGTCGCCGTTAACGACGCCGCACTCGAGGAG
TATGGCTGGTCGCGGGAGGAAGTCGTCGGAAAGCTGGCCGACGACTTCTA
TCCGCCGGAGGATCTGCCGGCACTGCAAGCCATGCGGAAGACGCCTGTCT
CCGGAGTTTTCCACATCGTGAAAGGGTTACGTCATCGCAAGAAGGACGGA
ACTGTTTTCGAGGTCGAGATGCACACGCGTGCGCTCGAGCTGGACGGCAA
GCCCGCGATGCTGACGATCATGGAGAATGTCAGCGTTCGGCATTCGGTCG
AAGCGCAGCTGCGACAGGCACAGAAGATGGAAGCCGTGGGCCAGCTGACC
GGCGGCATCGCGCACGACTTCAACAATATTCTTTTCGTCATCAGCGCCAA
CGCCGAGGAGCTCGCCGAAGAGAAGGGAATTTCCGCTGCCGTGGCGCAAC
GACTGGGCCAGATCGAGGAAGCGGTTGGGAGGGCGAGCGCCCTGACGCGT
CAGCTGCTGGCCTTCTCCCGCAAGCAGACGCTGCGTCCACAGCAAACCGA
CCTCAACGATCTCGTGTCCGACACCGGCGAGTTGCTGCGCCGTACATTGG
GCGCGGAGATCGAGATCGAATCCGTTCTCGCCGACGGGCTGTGCATCGCC
AACATCGACCGACCTCAGCTCGAATCCGCCCTGGTCAATCTCTGCATCAA
CGCCCGGGATGCGATGCCCAAGGGCGGCCGGCTGGTGATCGAGACCCGCA
AC
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