mRNA_H-fluviatilis_contig102910.609.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6A7MBU6_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MBU6_9PROT) HSP 1 Score: 307 bits (787), Expect = 1.810e-94 Identity = 165/275 (60.00%), Postives = 206/275 (74.91%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGV-FHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEA-------QLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
RY ++F AN YPMVV+D +S ++A+NDAA+ +YGWSREE + +DDFYPPEDL + A+R+ V + GLRHR +DG+V ++E+ +EL G+PA+LT ++NV+ R+ E QLRQ+QKMEAVGQLTGGIAHDFNNIL VI ANA+ L EE+ + AAVA RL QI +AV RAS LTRQLLAFSRKQ L P++TD+N LV+ TG+LLRR LG ++EIES LADGL NIDR QLE+ALVNLCINARDAMP GG+L I T N
Sbjct: 454 RYRMLFDANAYPMVVIDRQSRDILAINDAAVAQYGWSREEALTMTSDDFYPPEDLAKVTALRQQDQIRVGVGTITGLRHRTRDGSVIDLELSASKIELAGRPALLTTIQNVTERNRAEKARLAVAEQLRQSQKMEAVGQLTGGIAHDFNNILTVILANADALQEEENLDAAVAGRLDQIGQAVERASGLTRQLLAFSRKQPLSPKRTDINALVTTTGKLLRRALGEQVEIESALADGLWAVNIDRGQLETALVNLCINARDAMPGGGKLRIATSN 728
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A521QXY8_9HYPH (Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QXY8_9HYPH) HSP 1 Score: 278 bits (710), Expect = 4.450e-84 Identity = 146/273 (53.48%), Postives = 194/273 (71.06%), Query Frame = 1
Query: 4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
Y +FQA PY ++V D +S+RL+AVNDAA+++YGWSREE++ DFY PEDL L +++ S ++K +RHR+KDGT +VEM R LE DG+PA L +M +VS R + E QLR +Q+++ VG+LTGG+AHDFNNIL VI AN + + + + +++ + + +I A RA+ LTRQLLAFSRKQTLRPQ+ +LNDLV TG LLRRTLG IE+ SVLAD L N DR Q+E+A++NLCINARDAMP GGRL+I T N
Sbjct: 356 YRTLFQAAPYAIIVKDRDSHRLIAVNDAAVKQYGWSREEMLAMTMKDFYAPEDLQELADSQRSYSSEHSSLLKNVRHRRKDGTFIDVEMAVRLLEYDGRPATLAVMSDVSDRLRGERERVAAEEQLRASQRLDVVGKLTGGVAHDFNNILMVIMANVDAVLDAEDVASETRRSIERIGGAAERAAQLTRQLLAFSRKQTLRPQKINLNDLVVATGTLLRRTLGEHIEMNSVLADDLWETNADRSQVEAAIINLCINARDAMPGGGRLLIRTGN 628
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6N6ZS54_9PROT (Histidine kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZS54_9PROT) HSP 1 Score: 268 bits (684), Expect = 2.050e-78 Identity = 139/273 (50.92%), Postives = 191/273 (69.96%), Query Frame = 1
Query: 4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
Y +FQA PY ++V + +++RL+AVNDAA+++YGWSREE++ DFY +DL A+ A ++ ++ +RHR+KDGT+ +VEM R LE G+PA L ++ +VS R + E QLR +Q+++ VG+LTGG+AHDFNNIL VI AN + + + ++ Q + +I A RA+ LTRQLLAFSRKQTLRP++ DLNDLV TG LLRRTLG IEI S+LA+ L N DR Q+E+A++NLC+NARDAMP+GGRL I TRN
Sbjct: 894 YRTLFQAAPYAIIVKERDTHRLIAVNDAAVKQYGWSREEMLTMTMSDFYAADDLRAVTARERSYSGDSTALLTDIRHRRKDGTLIDVEMAVRLLEYGGRPATLAVISDVSDRVRGERARVATEEQLRASQRLDVVGKLTGGVAHDFNNILMVIMANVDAILDVPDVAPETRQSIERIGGAAERATQLTRQLLAFSRKQTLRPEKIDLNDLVVATGSLLRRTLGEHIEINSLLAEELWETNTDRGQVEAAIINLCLNARDAMPEGGRLFIRTRN 1166
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A259MS76_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MS76_9PROT) HSP 1 Score: 263 bits (672), Expect = 5.750e-78 Identity = 145/274 (52.92%), Postives = 189/274 (68.98%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVS-------VRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
RY +F+A PY +V D E+ R++A NDAA+ YG SR+E++ A+DFY P D PA+ R+ + V +++G+RHR+++G++ VEM R +E + A LTI+ +V R E QLRQAQKME VGQLTGGIAHDFNN+L VI AN +E+ EE+G+ V RL QI +AV RA+ LT QLLAFSRKQ L P+ TDLNDLV+ TG+LLRRTLG IE LA L +IDR QLE+AL+NLC+NARDA P GGR+ I++RN
Sbjct: 463 RYRTLFEAAPYAALVTDRETLRVLAANDAAVTLYGRSRDELLALTAEDFYVPGDRPAMTRRRRDFSADVTTVLQGVRHRRRNGSLMSVEMAVRLIEYQHRAAALTIVTDVGGRLRTEEARKVAEEQLRQAQKMEVVGQLTGGIAHDFNNLLTVILANTDEVQEEEGLDPRVKARLEQIAKAVLRAAELTSQLLAFSRKQALTPKATDLNDLVTTTGKLLRRTLGGHIEFIVDLAADLWPVDIDRAQLETALINLCVNARDATPGGGRMFIQSRN 736
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A521LLF1_9HYPH (Histidine kinase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LLF1_9HYPH) HSP 1 Score: 263 bits (671), Expect = 2.330e-77 Identity = 143/274 (52.19%), Postives = 188/274 (68.61%), Query Frame = 1
Query: 4 YALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAM-RKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVR-------HSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
Y +F NP PM V D ++ R +AVNDA + +YGW+REE + D PED+ L A+ R+ P V I RHR+KDG++ EVE+ A+E +G+PA+L + +++ R H+ E +LRQ QKMEAVGQLTGG+AHDFNNIL V+ AN + L ++ + AV + + I A RA+ LTRQLLAFSRKQ LRPQ TD+NDLV TG LLRRTLG ++E +SVLA+ L IDR QLE+AL+NLC+N+RDAMP GGRL++ETRN
Sbjct: 546 YRTLFDGNPDPMAVFDRDTRRYLAVNDAMVRQYGWTREEFLKMTPADLRLPEDMHMLDALLREGPPDPVRRIYG--RHRRKDGSIVEVEVSFAAVEFEGRPALLPMARDITERKRAEREHHASEEKLRQLQKMEAVGQLTGGVAHDFNNILMVMMANTDSLEDDYDLPPAVREHVANIARATRRAADLTRQLLAFSRKQPLRPQVTDVNDLVVATGRLLRRTLGEQVETDSVLAENLWPVAIDRAQLETALLNLCVNSRDAMPGGGRLLVETRN 817
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A6A7LYH5_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LYH5_9PROT) HSP 1 Score: 247 bits (630), Expect = 5.910e-73 Identity = 149/391 (38.11%), Postives = 201/391 (51.41%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRH----------------------------------------------------------------------------------------------------------------------------SVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
RY +F A+P+ +V+D ++ RL+ N+ A+ +YGWSREE++ ++DFYPPEDLPA+ A R+ ++ H+V LRHRKKDGT+ +VE +E G+PA+L +V+ R+ S+EAQL+QAQKMEAVGQLTGGIAHDFNNI+ V+ AN + L E++ ++ ++ +R+G I +A+GRA+ LTR LLAFSRK LRPQ DLN LV + G LLRRTLG +IEIES+L D L +DR Q E+ALVNLC+NARDAMP+GGRL+IET N
Sbjct: 160 RYRQLFDASPFFTIVVDRQTLRLLDANETAVRQYGWSREELLAMTSNDFYPPEDLPAVIAARERYMTDPAHVVPPLRHRKKDGTIIDVEQTVHPIEYRGRPALLVTANDVTARNRIVKELRESEQKYQALVEALPVGILETTADGRIVTANAAWRRMFGFADDEDLSKVDVQTLYADPRDRRAVMEALRTEGAPPTEAVFRRRGGTLFSVERYLRTVRNAEGEIVALRGIVIDIGPRKSLEAQLQQAQKMEAVGQLTGGIAHDFNNIMMVMMANVDALEEDQDLTPSIRRRVGHISKAIGRATDLTRSLLAFSRKLPLRPQSIDLNALVVNIGRLLRRTLGTQIEIESMLDDDLWPVEVDRGQFENALVNLCLNARDAMPEGGRLLIETAN 550
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A1H8TGR4_9PROT (Histidine kinase n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8TGR4_9PROT) HSP 1 Score: 234 bits (596), Expect = 5.430e-68 Identity = 145/392 (36.99%), Postives = 193/392 (49.23%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLT-----------------------------------------------------------------------------------------------------------------------------IMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
RY +F +P MVV+D ++ R++ N+A + +YGWS EE++ ++DFYPPEDLP + A R+ ++ +V LRHRKKDGT+ +VE ++ DGKPA+L I+ +++ R S+EAQL QAQKMEAVGQLTGG+AHDFNNIL ++ A + L EEK +S A +R+ QI A+ +AS LTR LLAFS K L PQ+ DLN LV D G LL+RTLG ++EIES+L L +DR QLE+ALVNLC+NARDAMP GGR++IETRN
Sbjct: 178 RYRRLFNVSPVLMVVLDRQTRRVLDANEATVRQYGWSHEELLTMSSNDFYPPEDLPDVLAQRERFMADPNRVVPPLRHRKKDGTIIDVEQTILPIDYDGKPALLVTANDVTERNRAMRELRESEQRYQALVETLPVGVLETTTDGRIVTANLAWRHMFGFGDDEDLGKLDVRDLYANPDDRGAVVQLVQAEGAIPATESVFRRRDGTIFPVERYLRSVRDETGMVTSLRGIVIDITQRKSLEAQLHQAQKMEAVGQLTGGVAHDFNNILMIVMAGVDALEEEKSLSQAARRRVDQISRAIDKASDLTRSLLAFSHKLPLLPQRVDLNALVLDVGRLLQRTLGTQVEIESMLGKDLWPVEVDRGQLENALVNLCVNARDAMPDGGRVLIETRN 569
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V8SIG2_9BACT (Hybrid sensor histidine kinase/response regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8SIG2_9BACT) HSP 1 Score: 223 bits (568), Expect = 6.600e-66 Identity = 124/272 (45.59%), Postives = 173/272 (63.60%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPAL-----QAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
RY L+F+ NP+PM V D E+ R +AVN+AA+ YG+SREE + D PPED+PAL + + +GV+ RHRKKDG V +VE+ + L G+ A + + +V+ R +E QLRQ+QKMEAVGQL GG+AHDFNN+L I+ ++ + + +I++A RA+ALTRQLLAFSRKQ L+P+ DLN +VS+ ++LRR +G ++E + LA L D Q+E L+NLC+NARDAMP GG L +ET N
Sbjct: 38 RYRLLFENNPHPMWVYDLETLRFLAVNEAAVRHYGYSREEFLTMTIKDIRPPEDVPALLENITRIGEELDKAGVW------RHRKKDGGVIDVEITSHTLVFAGRRAEVVLANDVTERKMLEEQLRQSQKMEAVGQLAGGVAHDFNNLLTAITGYSDLAIRRLKAEDPLRHHIEEIKKAGERAAALTRQLLAFSRKQVLQPKVLDLNAVVSEMEKMLRRLIGEDVEFRTALASDLGSIKADPGQIEQVLLNLCVNARDAMPGGGNLTVETSN 303
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V7L6F2_9BACT (Hybrid sensor histidine kinase/response regulator (Fragment) n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7L6F2_9BACT) HSP 1 Score: 223 bits (568), Expect = 8.580e-66 Identity = 123/267 (46.07%), Postives = 165/267 (61.80%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQAMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIETRN 801
+Y +F+ PYPM V D E++RL+AVN AA+ YG+ REE + +D PED+PAL+ T +G +H RHRKKDGT+ EV+ + G+ A L ++++V+ R +E Q RQAQKMEAVG+L G+AHDFNN+L I + + E+ + L I A RA+ LTRQLL FSR+Q + P+ LN+L++D +LLRR LG ++ I S LA D QLE LVNL +NARDAMP GGRL IETRN
Sbjct: 141 QYRALFENTPYPMWVFDLETHRLLAVNSAAIAHYGYRREEFLALKIEDLRAPEDIPALEQHLATKEAG-YHTTGPWRHRKKDGTLIEVQTSGHEITFAGRRAELVVIDDVTERKRLEEQFRQAQKMEAVGRLAAGVAHDFNNLLTAILGTTDLMIEDLPADDPDREGLLDIRGAAERAAVLTRQLLTFSRQQVVSPRMLRLNELITDLVKLLRRLLGEDVTIASALAPDCGAVKADPGQLEQVLVNLAVNARDAMPNGGRLTIETRN 406
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Match: A0A2V7V0F9_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7V0F9_9BACT) HSP 1 Score: 228 bits (581), Expect = 8.150e-65 Identity = 125/268 (46.64%), Postives = 171/268 (63.81%), Query Frame = 1
Query: 1 RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYPPEDLPALQ---AMRKTPVSGVFHIVKGLRHRKKDGTVFEVEMHTRALELDGKPAMLTIMENVSVRHSVEAQLRQAQKMEAVGQLTGGIAHDFNNILFVISANAEELAEEKGISAAVAQRLGQIEEAVGRASALTRQLLAFSRKQTLRPQQTDLNDLVSDTGELLRRTLGAEIEIESVLADGLCIANIDRPQLESALVNLCINARDAMPKGGRLVIET 795
+Y L+F +NP+PM V D E+ +AVNDAA+ YG+SREE D P D+P L+ A R+ F + RHRKKD V +VE+ + + G+P L + +V+ + +EAQL QAQKME+VG+L GG+AHDFNN+L VI+ + L E G R+ +I +A RA+ LTRQLLAFSRKQ L P DLN +VSDT +LRR +G ++++ +VLA GL DR QLE +VN+ +NARDAMP+GG+L+IET
Sbjct: 552 QYRLLFDSNPHPMWVYDDETLAFLAVNDAAVRHYGYSREEFSAMTLRDIRPASDVPVLEEQVARRREAAREPFSSPRVWRHRKKDAAVIDVEISSSPITFRGRPGWLALAADVTEKKRLEAQLLQAQKMESVGRLAGGVAHDFNNLLGVITGYGDLLQREIGPEHPGFHRVEEIRKAAERAAVLTRQLLAFSRKQVLEPTVLDLNVVVSDTENMLRRLIGEDVQLVTVLAGGLGRVKGDRGQLEQVIVNMAVNARDAMPQGGKLIIET 819 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102910.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102910.609.1 >prot_H-fluviatilis_contig102910.609.1 ID=prot_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=267bp RYALIFQANPYPMVVMDSESYRLVAVNDAALEEYGWSREEVVGKLADDFYback to top mRNA from alignment at H-fluviatilis_contig102910:2..802+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102910.609.1 ID=mRNA_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=801bp|location=Sequence derived from alignment at H-fluviatilis_contig102910:2..802+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102910:2..802+ >mRNA_H-fluviatilis_contig102910.609.1 ID=mRNA_H-fluviatilis_contig102910.609.1|Name=mRNA_H-fluviatilis_contig102910.609.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1602bp|location=Sequence derived from alignment at H-fluviatilis_contig102910:2..802+ (Heribaudiella fluviatilis SAG_13_90)back to top |