mRNA_H-fluviatilis_contig102882.601.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A6H5LL89_9PHAE (Peptidase_M23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL89_9PHAE) HSP 1 Score: 135 bits (341), Expect = 5.680e-36 Identity = 64/92 (69.57%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
VLA+R GVV DHF EGG R+ L PR+N+VALRH DGTYTRY+HLM GG LV+VGQEV AG+ IALSGNTG++ PHLHFDAV +LPQE+
Sbjct: 35 VLASRAGVVAAYCDHFGEGGLRQGLRPRANYVALRHRDGTYTRYVHLMRGGVLVQVGQEVAAGEVIALSGNTGYSPTPHLHFDAVKVLPQET 126
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: UPI001E6149D6 (M23 family metallopeptidase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001E6149D6) HSP 1 Score: 114 bits (284), Expect = 4.370e-30 Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLP 267
VLAAR+GVVV RD FREGG E L R+N + +RH DGT Y+HLM GGA VRVGQ VR GQ I LSGNTG+++ PHLHF+ + P
Sbjct: 56 VLAAREGVVVEVRDTFREGGADEALRDRANRIKIRHDDGTIGAYVHLMRGGARVRVGQRVRRGQVIGLSGNTGYSTGPHLHFEVYKIEP 144
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A8J2WE38_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE38_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.500e-30 Identity = 55/92 (59.78%), Postives = 67/92 (72.83%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
VLAAR G + DHFR GG + L PR+NFVA+RHSDG+Y RY HL G+L +VG+ V GQ IA SGNTG+T PHLHFD V+LLP+E+
Sbjct: 88 VLAARGGTIAAVVDHFRGGGAKAHLAPRANFVAVRHSDGSYARYYHLKEKGSLYKVGERVGRGQQIAWSGNTGYTGGPHLHFDLVNLLPEET 179
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A7S2C303_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C303_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.130e-29 Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
++AAR GVV HF EGG +L PR+NFVA++HSDGTY RY HL G V G V+AGQ + LSGNTGF+S PHLHFD V +LP+++
Sbjct: 79 LVAARPGVVAATAGHFNEGGLEGKLRPRANFVAVQHSDGTYARYFHLRRQGVTVEAGDTVKAGQQVGLSGNTGFSSTPHLHFDVVDMLPEDT 170
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A7S2HAX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAX5_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.720e-29 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 7 AARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
AAR GVV HF +GG + PR+NF+A++H+DGTY RY HL G +VG +V AGQ +ALSGNTGF+S PHLHFD ++LP+++
Sbjct: 1 AARTGVVAAAVAHFDKGGLKNDFRPRANFIAIQHADGTYARYFHLQKNGCSAKVGDQVIAGQQVALSGNTGFSSCPHLHFDVTNMLPEDT 90
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A7S3K4G7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4G7_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.560e-28 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
VLAAR GVV HF GG R L PR+N++A+RH DG+Y RY HL G+ ++VG V+ GQ IALSGNTG+T PHLHFD V++LP+E+
Sbjct: 70 VLAARGGVVAAVVTHFSGGGARAHLAPRANYIAIRHDDGSYGRYYHLRKDGSKLKVGDRVKRGQVIALSGNTGYTGGPHLHFDVVNVLPEET 161
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: UPI001389E852 (M23 family metallopeptidase n=1 Tax=Pseudoxanthomonas taiwanensis TaxID=176598 RepID=UPI001389E852) HSP 1 Score: 105 bits (261), Expect = 1.510e-25 Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHF 246
VLAAR+GVV+ +REGGP RL R+NFV + H+DG+ Y HL PGG LVR GQ VR G+ I LSGNTG+++ PHLHF
Sbjct: 169 VLAAREGVVMQTEAGYREGGPEPRLRGRANFVRILHADGSMATYAHLQPGGVLVRPGQHVRQGERIGLSGNTGYSTAPHLHF 250
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: R1ECT1_EMIHU (Peptidase_M23 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ECT1_EMIHU) HSP 1 Score: 105 bits (262), Expect = 2.870e-25 Identity = 51/92 (55.43%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
VLAAR GVVV D FR G P+ P +N V LRH+DG Y+RY HL G VG V GQPIA SGNTGF+S PHLHFD P E+
Sbjct: 80 VLAARAGVVVEACDVFRAGAPKPEYRPLANHVVLRHADGLYSRYFHLKQGSLRTSVGAAVSVGQPIAASGNTGFSSGPHLHFDVTDSTPTET 171
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A2V5PVL6_9BACT (Peptidase_M23 domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5PVL6_9BACT) HSP 1 Score: 103 bits (258), Expect = 4.960e-25 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLL 264
V AAR+G VV R GGP + P +N+V ++H+DGT+ Y+HL P GALV++G EV+ GQPI LSG TGFTS PHLHF +
Sbjct: 176 VCAAREGRVVGVRQDSTVGGPDRKFRPFANYVIIKHADGTFADYVHLKPEGALVKIGDEVKVGQPIGLSGQTGFTSAPHLHFSVFQAI 263
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Match: A0A7S4BTM6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BTM6_CHRCT) HSP 1 Score: 105 bits (262), Expect = 1.230e-24 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1 VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGGALVRVGQEVRAGQPIALSGNTGFTSEPHLHFDAVSLLPQES 276
V+AAR+G V D F EGG R+ L R+N V +RH+DG Y+RY HL P ALV GQ V AGQ IA SGNTGF+S PHLHFD V + E+
Sbjct: 72 VVAAREGEVAAVCDCFTEGGLRKELKARANHVVIRHADGLYSRYYHLQPSSALVCKGQRVTAGQRIAASGNTGFSSGPHLHFDVVDVFNLET 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102882.601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102882.601.1 >prot_H-fluviatilis_contig102882.601.1 ID=prot_H-fluviatilis_contig102882.601.1|Name=mRNA_H-fluviatilis_contig102882.601.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=94bp VLAARDGVVVHERDHFREGGPRERLLPRSNFVALRHSDGTYTRYIHLMPGback to top mRNA from alignment at H-fluviatilis_contig102882:104..788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102882.601.1 ID=mRNA_H-fluviatilis_contig102882.601.1|Name=mRNA_H-fluviatilis_contig102882.601.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=685bp|location=Sequence derived from alignment at H-fluviatilis_contig102882:104..788- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102882:104..788- >mRNA_H-fluviatilis_contig102882.601.1 ID=mRNA_H-fluviatilis_contig102882.601.1|Name=mRNA_H-fluviatilis_contig102882.601.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=564bp|location=Sequence derived from alignment at H-fluviatilis_contig102882:104..788- (Heribaudiella fluviatilis SAG_13_90)back to top |