mRNA_H-fluviatilis_contig10288.600.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: D8LFW5_ECTSI (Putative ubiquitin fusion-degradation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW5_ECTSI) HSP 1 Score: 239 bits (610), Expect = 7.430e-71 Identity = 118/156 (75.64%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 GRFCESYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTE----RVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
G C++Y CHS+A LDRPGLE+GDKIIMP +AF EAHRLRL LPLLFK+VNT+ R+ G GP PSQFCGVLEF+ P+DQVF+PYW+MQNLLLSEGGRVELRSI+RPPAGS V +PHDEAFL VAA+QGPKALME ALRRYSVL EG TILVQ
Sbjct: 19 GILCKTYQCHSMACLDRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVGTRRIMGTTGPSPSQFCGVLEFSAPEDQVFLPYWLMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDEAFLGVAAKQGPKALMEFALRRYSVLSEGATILVQ 174
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A1V9YIC0_9STRA (Ubiquitin fusion degradation protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIC0_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.790e-36 Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 7 FCESYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
F S+ C+SVA +D P LE GDK+I+PP E L+++LP++FKV +++ P Q+C VLEF+ P Q++ PYWMMQNLL+ EGG + L + P G +PH+ FL++AA GPK L+E A+R+YSVL G TI ++
Sbjct: 7 FRGSFTCYSVACIDMPDLEFGDKVILPPKVLLEMQCLKIALPIVFKVTSSQ-----TAALPCQYCSVLEFSAPDGQMYAPYWMMQNLLVDEGGPLHLETAFGIPRGIYCRFQPHESVFLDLAAALGPKVLLEAAMRKYSVLSIGETIAIE 151
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A067D5J6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D5J6_SAPPC) HSP 1 Score: 136 bits (343), Expect = 1.300e-34 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 4 RFCESYLCHSVAYL--------------DRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
+F + C+SVA L D P LE GDK+I+PP+ R+ L++ LPL+F+V +T P QFC VLEF+ P Q+F PYWMMQNLL+ EGGR++L S P G +PH AFL++AA GPK L+E A+R+YSVL G TI+++
Sbjct: 6 QFRGRFECYSVACLGATRPIRGVLTLVVDMPDLEFGDKVILPPAVLRDLQVLKIPLPLVFRVTSTN------APDVRQFCSVLEFSAPDGQMFAPYWMMQNLLVDEGGRLQLESATNIPRGVYCRFQPHVGAFLDLAATLGPKILLESAMRKYSVLSVGETIVIE 164
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: T0RW44_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RW44_SAPDV) HSP 1 Score: 132 bits (332), Expect = 3.730e-33 Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 52 PGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
P LE GDK+I+P + R+ L++ LPL+F+V +T P QFC VLEF+ P Q+F PYWMMQNLL EGGR++L S P G L+PH AFL++AA GPK L+E A+R+YSVL G TI+++
Sbjct: 2 PDLEFGDKVILPSAVLRDLQLLKIPLPLVFQVTST------TAPNVRQFCSVLEFSAPDGQMFAPYWMMQNLLCDEGGRLQLESATNIPRGVYCRLQPHVSAFLDLAATLGPKILLESAMRKYSVLSVGETIVIE 130
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A024UHJ9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHJ9_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.960e-33 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 16 SYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
S+ C+SVA++D+P LE GDK+I+PP+ E RL++ LPLLFK+ ++ + Q+CGV+EF+ P Q++ PYWMMQ L + EG V L S + P G L+P+ L++AA GPK L+E A+RRYS L G TI+++
Sbjct: 29 SFTCNSVAFIDKPDLEFGDKVILPPNVLVEIQRLKIPLPLLFKLTSSHASSSEC----CQYCGVMEFSAPVGQMYAPYWMMQQLGVDEGANVHLESALSIPRGLYCQLQPNRLEILDIAASIGPKILLESAMRRYSCLGVGGTIMIE 171
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A024UI65_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI65_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.150e-33 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 16 SYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
S+ C+SVA++D+P LE GDK+I+PP+ E RL++ LPLLFK+ ++ + Q+CGV+EF+ P Q++ PYWMMQ L + EG V L S + P G L+P+ L++AA GPK L+E A+RRYS L G TI+++
Sbjct: 29 SFTCNSVAFIDKPDLEFGDKVILPPNVLVEIQRLKIPLPLLFKLTSSHASSSEC----CQYCGVMEFSAPVGQMYAPYWMMQQLGVDEGANVHLESALSIPRGLYCQLQPNRLEILDIAASIGPKILLESAMRRYSCLGVGGTIMIE 171
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A8K1CMT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT8_PYTOL) HSP 1 Score: 129 bits (324), Expect = 6.560e-33 Identity = 71/148 (47.97%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 25 CHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPS-----QFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILV 453
C SVA LD P LE GDKI++P + E ++ P+LF + R G P + Q+C V EF+ P QVF+PYWMMQNL +SEG V L S++ P G L+P D AFL +AA+ GPK L+E ALRRYSVL E TIL+
Sbjct: 35 CFSVACLDMPALEFGDKIVLPANVLMELQCFKIPTPMLFHI----RAFGHEDPASNTDSWTQYCSVQEFSAPPGQVFIPYWMMQNLYISEGQDVLLTSVLSLPRGIYCRLQPEDSAFLTIAAEIGPKLLLESALRRYSVLSEHETILI 178
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: V9E2N2_PHYPR (TRAF-type domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9E2N2_PHYPR) HSP 1 Score: 130 bits (326), Expect = 2.150e-32 Identity = 69/146 (47.26%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 25 CHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPP--SQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILVQ 456
C SVA LD P LE GDKI++PP + L++ PL+F V + N G SQ+C V EF+ P QVF+PYW+MQNL + EGG V + S++ P G L+P +FL++AA+ GPK LME ALRRYSVL G TI+++
Sbjct: 35 CFSVACLDMPHLEFGDKIVLPPKILVDLQCLKIPTPLIFMVRAAGQDNQPEGDLAISSQYCSVQEFSSPDGQVFVPYWLMQNLGVREGGSVVVTSVVNLPRGVYCRLQPETTSFLDLAAEIGPKLLMETALRRYSVLSTGSTIVIE 180
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: A0A6H5JNY9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY9_9PHAE) HSP 1 Score: 129 bits (325), Expect = 6.020e-32 Identity = 73/132 (55.30%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 1 GRFCESYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVNTERVNGGVGPPPSQFCGVLEFNEPQD-----QVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQ 381
G FC++Y CHS+A LDRPGLE GDKIIMP +AF EA R + +T+R P F VL QVF+PYW+MQNLLLSEGGRVELRSI+RPPAGS V +PHDE+FL VAA+Q
Sbjct: 32 GIFCKTYKCHSMACLDRPGLEFGDKIIMPQAAFHEASSRRFA-------EDTQR------PDAVSFVIVLPVRPRHRSYHRIQVFLPYWLMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDESFLGVAAKQ 150
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Match: UPI000E701A09 (ubiquitin fusion degradation protein 1 homolog isoform X2 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E701A09) HSP 1 Score: 123 bits (308), Expect = 1.780e-31 Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 1
Query: 7 FCESYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVN--TERVNGGVGPPPSQFCGVLEFNEPQDQVFMPYWMMQNLLLSEGGRVELRSIIRPPAGSLVCLRPHDEAFLEVAAQQGPKALMECALRRYSVLCEGVTILV 453
F ++Y C+ +++D+P LE GDKIIMPPSA L + P+LF+V N TERV+ CGVLEF + ++MPYWMMQN+LL EGG V ++++ P G+ V L+PH + FL+++ PKA++E LR +S L G +I+V
Sbjct: 13 FEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFEVRNAATERVS---------HCGVLEFIAEEGMIYMPYWMMQNMLLEEGGTVRVKNVTLPK-GTYVKLQPHTKDFLDIS---NPKAILETTLRNFSCLTTGDSIMV 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10288.600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10288.600.1 >prot_H-fluviatilis_contig10288.600.1 ID=prot_H-fluviatilis_contig10288.600.1|Name=mRNA_H-fluviatilis_contig10288.600.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=152bp GRFCESYLCHSVAYLDRPGLEIGDKIIMPPSAFREAHRLRLSLPLLFKVVback to top mRNA from alignment at H-fluviatilis_contig10288:5373..7583+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10288.600.1 ID=mRNA_H-fluviatilis_contig10288.600.1|Name=mRNA_H-fluviatilis_contig10288.600.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=2211bp|location=Sequence derived from alignment at H-fluviatilis_contig10288:5373..7583+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10288:5373..7583+ >mRNA_H-fluviatilis_contig10288.600.1 ID=mRNA_H-fluviatilis_contig10288.600.1|Name=mRNA_H-fluviatilis_contig10288.600.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=912bp|location=Sequence derived from alignment at H-fluviatilis_contig10288:5373..7583+ (Heribaudiella fluviatilis SAG_13_90)back to top |