mRNA_H-fluviatilis_contig102754.586.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: W7TTS7_9STRA (Thymidylate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTS7_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.240e-25 Identity = 53/106 (50.00%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFTTNGDVVLRIAVE 318
G GGTAG+PIL AIESE L DVMVVVTRYFGGIKLG GGL RAY G AR CL++AE T P + + + AP+ G V+ ++ ++ E++T ++++ + V+
Sbjct: 140 GEPGGTAGRPILSAIESEDLVDVMVVVTRYFGGIKLGAGGLVRAYGGVARTCLRNAETLTHIPKVLVRLRAPLSMSGAVFQTINRTDKIKEDYTAE-EIIVDVKVD 244
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A836C1E9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C1E9_9CHLO) HSP 1 Score: 102 bits (255), Expect = 6.450e-25 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVS--ECQRLSEEFTTNGDVVLRIAVE 318
G GGTAG+PIL AIE EGL V V+VTRYFGGIKLG GGL RAY G A+ CL+ A R +++ V P G LG VY + +C RL+EE+ ++G V++R V+
Sbjct: 79 GEPGGTAGRPILSAIEGEGLERVAVLVTRYFGGIKLGAGGLVRAYGGAAKECLRLAPRAFAKARVEVQVNVPYGELGTVYGCLDMHQCTRLAEEYGSSGTVLIRALVD 186
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A7S2X6S7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X6S7_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 8.930e-23 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFTTNGDVVL 303
G GGTAG+PIL AIE GL V VVVTR+FGGIKLG GGLCRAY G A CL+ A+R P+++L V+ +G +Y A+S Q + ++ +G VV+
Sbjct: 157 GEPGGTAGRPILQAIEYSGLDGVGVVVTRFFGGIKLGAGGLCRAYGGAAASCLRQAQRVKVVPMVELRVSCAADLIGIIYRALSAYQGVHTDYCEDGSVVI 257
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A399F4R6_9DEIN (IMPACT family member YigZ n=1 Tax=Meiothermus granaticius NBRC 107808 TaxID=1227551 RepID=A0A399F4R6_9DEIN) HSP 1 Score: 95.9 bits (237), Expect = 1.670e-22 Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 13 GTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFTTNG 291
GTAG+P+L AIE +GL VMVVVTRYFGG+KLG GGL RAY+G A CL+ A + P+ +L + AP V+H ++ QR SE +T G
Sbjct: 67 GTAGRPVLSAIEGQGLDGVMVVVTRYFGGVKLGAGGLIRAYSGAAAECLRQAPKREVLPMARLRLQAPFELSNTVFHLLTGVQRESETYTEQG 159
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A1T1BI42_9DEIO (IMPACT family protein n=12 Tax=Deinococcus TaxID=1298 RepID=A0A1T1BI42_9DEIO) HSP 1 Score: 95.9 bits (237), Expect = 2.200e-22 Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRL-SEEFTTNGDVVLRIAV 315
G GGTAG PIL AIE +G+ VMVVV R++GG+KLGTGGL RAY GGA CL+ A R T L+V+ P FLGG+YH + + EE + V LR+ V
Sbjct: 69 GEPGGTAGAPILRAIEGQGVDRVMVVVVRFYGGVKLGTGGLVRAYGGGAAECLRTAARVTVRARRALAVSVPFEFLGGLYHLLGSLDVVRGEEAYSGAGVSLRVEV 174
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A7S3Z9V1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9V1_9EUKA) HSP 1 Score: 97.8 bits (242), Expect = 2.540e-22 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFTTNGDVVL 303
G GGTAG+PIL AIE GL V VVVTR+FGGIKLG GGLCRAY G A CL+ A+R P+++L V+ +G +Y +S Q + ++ +G VV+
Sbjct: 159 GEPGGTAGRPILQAIEYSGLDGVGVVVTRFFGGIKLGAGGLCRAYGGAAATCLRQAQRVKVVPMVELRVSCAADLIGIIYRTLSAYQGVRTDYCEDGSVVI 259
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A7S0DAN8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DAN8_MICPS) HSP 1 Score: 97.1 bits (240), Expect = 2.580e-22 Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPV-GFLGGVYHAVSE--CQRLSEEFTTNGDVVLRIAVE 318
G GGTAG+PIL AIE G + VVVTRY+GG +LGTGGL RAY G A L+DA +TP++ +TAP FLG +Y A+ E ++ EEF +G V ++I VE
Sbjct: 127 GEPGGTAGRPILAAIEGSGFDALAVVVTRYYGGTQLGTGGLIRAYGGAAAKALEDAPGILKTPMVDAIITAPSPDFLGAIYRAMEEWRAEKEDEEFPEDGSVFVQILVE 235
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: A0A3E1K5H2_9GAMM (YigZ family protein n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1K5H2_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 4.920e-22 Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSEC--QRLSEEFTTNG 291
G GGTAG+PIL AIES+G +VVVTR+FGG KLGTGGL RAY G A L+ AE P ++L + P F+G +HA+SE ++LSE++ T+G
Sbjct: 64 GEPGGTAGRPILQAIESQGYDRTVVVVTRFFGGTKLGTGGLARAYGGTANEALRTAESTPIVPKVRLRLNLPFEFVGAAHHALSEFGGEKLSEDYDTDG 162
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: UPI00047FDB9A (YigZ family protein n=1 Tax=Meiothermus cerbereus TaxID=65552 RepID=UPI00047FDB9A) HSP 1 Score: 94.4 bits (233), Expect = 7.270e-22 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 13 GTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFTTNGDVVLRIAVELGQV 330
GTAG+PILGAI+++GL VMVVVTRYFGGIKLG GGL RAY G A CL+ A ++ P+++ + AP + +Y +RL+E + G V + + +E Q+
Sbjct: 68 GTAGRPILGAIDAQGLDRVMVVVTRYFGGIKLGAGGLVRAYGGVAAECLRQAPKQAIRPMMRCQLRAPFEYTNALYQITEGLKRLTENYDEEG-VWVEVQIEEQQL 172
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Match: UPI000369F5B1 (IMPACT family protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI000369F5B1) HSP 1 Score: 94.4 bits (233), Expect = 7.610e-22 Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 1 GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARLCLQDAERETRTPVLQLSVTAPVGFLGGVYHAVSECQRLSEEFT--TNGDVVLRIAVE 318
G GGTAGQPIL AI+++GL VMVVVTRYFGG+KLG GGL RAY G A CL+ A + P L+L + AP G VY A+ E +L+ EF T +VL +E
Sbjct: 63 GEPGGTAGQPILRAIQAQGLDRVMVVVTRYFGGVKLGAGGLARAYGGVAAECLRQAPKREIVPRLRLRLEAPFEMAGQVY-ALLERWKLAREFEGYTEAGLVLEFVLE 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102754.586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102754.586.1 >prot_H-fluviatilis_contig102754.586.1 ID=prot_H-fluviatilis_contig102754.586.1|Name=mRNA_H-fluviatilis_contig102754.586.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=112bp GLAGGTAGQPILGAIESEGLSDVMVVVTRYFGGIKLGTGGLCRAYAGGARback to top mRNA from alignment at H-fluviatilis_contig102754:50..788+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102754.586.1 ID=mRNA_H-fluviatilis_contig102754.586.1|Name=mRNA_H-fluviatilis_contig102754.586.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=739bp|location=Sequence derived from alignment at H-fluviatilis_contig102754:50..788+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102754:50..788+ >mRNA_H-fluviatilis_contig102754.586.1 ID=mRNA_H-fluviatilis_contig102754.586.1|Name=mRNA_H-fluviatilis_contig102754.586.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=672bp|location=Sequence derived from alignment at H-fluviatilis_contig102754:50..788+ (Heribaudiella fluviatilis SAG_13_90)back to top |