mRNA_H-fluviatilis_contig102420.542.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A6L5FEJ9_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FEJ9_9HYPH) HSP 1 Score: 458 bits (1179), Expect = 1.760e-159 Identity = 224/269 (83.27%), Postives = 251/269 (93.31%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTEGKPD+GL K+RKLVLSD+VEVM G+I+SAVALAVAPYLSSQR+PLV+SNASTD L+G KCDRY+FRASYS AQITEPIGLWMAK+APKN++ILASD+VAPHEYVAA K+GYLAGGG I GE + PF RTQDYGPYISQAR+ANPGA+F+V+FA EALLFVKQYDSFGMKA TPLFGP+GLTPPVLRKAQGP+A G+IS SNYV ELD PENR FREAYKKKFGEDPEEF+VMGYD++RFII+AVKARNGDTKDRPALVGAIEKV+
Sbjct: 100 EDTEGKPDMGLAKSRKLVLSDRVEVMTGIISSAVALAVAPYLSSQRVPLVISNASTDLLSGAKCDRYVFRASYSCAQITEPIGLWMAKHAPKNLYILASDFVAPHEYVAAMKRGYLAGGGMIVGETFTPFARTQDYGPYISQARSANPGAIFAVYFAAEALLFVKQYDSFGMKAKTPLFGPVGLTPPVLRKAQGPSALGVISPSNYVVELDTPENRAFREAYKKKFGEDPEEFSVMGYDAMRFIIEAVKARNGDTKDRPALVGAIEKVA 368
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: UPI0018693427 (ABC transporter substrate-binding protein n=1 Tax=Oricola sp. NBU1457 TaxID=2775868 RepID=UPI0018693427) HSP 1 Score: 258 bits (660), Expect = 2.440e-81 Identity = 124/269 (46.10%), Postives = 179/269 (66.54%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
ED+E KP VG+ K RKLVL D+V+ M G+++SAV AV ++ ++PL+++NA D TG C +Y+ R S+S+ Q+ P+G WMA+ K ++ LA DY A H+ + AF + + A GG I G Y PF +TQD+GPY++ A+AA+P A+F + GEA+ FVKQYDSFG+K + PL+G LT P+ KA+GPAA G+ ++ +YV LD PEN+ F A+K KF P E+AV GYD+ R +++AVKA DR ++ + KVS
Sbjct: 67 EDSEAKPPVGVAKARKLVLQDEVDAMVGIVSSAVLGAVRDFVDGSKVPLIVANAGNDAATGASCSKYIVRVSFSNGQVNRPMGSWMAEQGIKKVYTLAPDYAAGHQMIDAFTESFTAAGGEIVGSEYTPFGKTQDFGPYLTTAKAASPDAIFVFYAGGEAISFVKQYDSFGIKKDIPLYGSGFLTSPLYVKAEGPAAIGVKTSLHYVPTLDTPENKAFVAAFKAKFDRPPSEYAVQGYDAARVLVEAVKA---GANDRESIAEGLTKVS 332
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: UPI001AD8CFB5 (ABC transporter substrate-binding protein n=2 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001AD8CFB5) HSP 1 Score: 256 bits (653), Expect = 2.850e-80 Identity = 131/270 (48.52%), Postives = 186/270 (68.89%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAG-EALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
ED+E KP VG+ K RKLVL D+V+ M G+++SAV AV ++ ++PLV++NA D TG+ C RY+ R S+S+AQI P+G WMA+ K ++ LA DY A H+ + AF + + A GG I G Y PF +TQD+GPY+++A+AA+P A++ VF+AG EA+ FVKQYDSFG+K + PL+G LT P+ A+GPAA G+ +A +YV ++ PEN+ F A+K KF P EFAV GYD+ R +++AVKA G T DR ++ + KVS
Sbjct: 68 EDSEAKPQVGVAKARKLVLQDEVDAMVGIVSSAVLGAVRDFVDGSKVPLVVANAGNDEATGKNCSRYITRVSFSNAQINRPMGEWMARIGVKKVYTLAPDYAAGHQMIDAFAESFKAAGGEIVGSEYTPFGKTQDFGPYLTKAKAASPDAIY-VFYAGKEAITFVKQYDSFGLKKDIPLYGSGFLTSPLYVAAEGPAAIGVTTALHYVPTINTPENKAFVAAFKAKFDRAPSEFAVQGYDAGRVLVEAVKA--GAT-DRASITEQLSKVS 333
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A7S8C4C6_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C4C6_9HYPH) HSP 1 Score: 248 bits (632), Expect = 4.010e-77 Identity = 122/269 (45.35%), Postives = 178/269 (66.17%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTE KP VGL K RKLVL D+V+V+ G+++S V AV ++ ++PL+++NA D TG +C +Y+ R S+S+ Q+ P+G WM + ++ LA DY A + V AF + + GG I GE + PF +TQD+GPY+++A+AA P A+F + GEA+ FVKQYDSFG+KA+ PL+G LT P+ A+GPAA G+++A +YV +D PENR F EA++ + P E+AV GYD+ R +I+AVK+ R AL A+ KV+
Sbjct: 68 EDTEVKPPVGLAKARKLVLEDEVDVIVGLVSSGVLGAVRDFVDGAQVPLIVANAGNDDATGSRCSKYITRVSFSNGQVNRPMGQWMYDQGIRKVYTLAPDYAAGRQMVGAFAEAFRQAGGEIVGEDFTPFRKTQDFGPYLTKAKAAGPDAIFVFYAGGEAISFVKQYDSFGIKADIPLYGSGFLTSPLYVNAEGPAAEGVVTALHYVPTIDTPENRAFVEAFRARTDRAPSEYAVQGYDAGRALIEAVKS---GADSREALASALAKVT 333
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A1H8LGW4_9RHOB (Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=3 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A1H8LGW4_9RHOB) HSP 1 Score: 247 bits (630), Expect = 9.810e-77 Identity = 127/269 (47.21%), Postives = 176/269 (65.43%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
ED E KP VGL KT+KL+L D+V+VM GV++S V A+ + +PL+++NA D TGE C ++ R S+S+ Q+ P+G WM K +F +A DY A + + AF G+ A GG + G+ +P F +TQD+GP+++ A+A+ AV+ F GEA+ FVKQYDSFGMKA PL+G LT + +AQGPAA G+I+A +YV LD+PEN F A+K+K G P E+AV GYDS R +++AVKA G T DR L A+ KVS
Sbjct: 70 EDDEVKPPVGLAKTKKLILQDEVDVMVGVVSSGVLGAIRDTVDGAGVPLIVANAGNDEATGEACSPFITRISFSNQQVNRPMGKWMVDQGVKKVFTIAPDYAAGRQMIDAFTTGFTAAGGEVVGQEWPAFQKTQDFGPFLANAKASGADAVYVFFAGGEAISFVKQYDSFGMKAELPLYGSGFLTSALYVEAQGPAAEGVITALHYVPTLDNPENAAFVAAFKEKTGRIPSEYAVHGYDSARALVEAVKA--GAT-DRETLAAALPKVS 335
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A238K6Z9_9RHOB (Peripla_BP_6 domain-containing protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A238K6Z9_9RHOB) HSP 1 Score: 245 bits (626), Expect = 3.600e-76 Identity = 123/269 (45.72%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTE KP V L K +KL+L DKV+V+AG+++S V AV + +PL+++NA D TG C Y+ R S+S+ Q+ P+G WMA K ++ LA DY A + + AF Y A GG I G+ + PF +TQD+GPY++QA+A+ AV+ + GEA+ FVKQYDSFG+KA PL+G LT P+ A+GPAA G+I+A +YV +D+ EN+TF EA+ G P EFAV GYD+ R +++A K DR AL A+ +VS
Sbjct: 67 EDTEVKPPVALGKAKKLILQDKVDVVAGIVSSGVLGAVRDMIDGAGVPLIVANAGNDEATGADCSPYITRMSFSNGQVNRPMGAWMAAQGIKKVYTLAPDYAAGRQMIDAFAASYTAAGGEIVGQEFTPFQKTQDFGPYLAQAKASGAEAVYVFYAGGEAISFVKQYDSFGLKAELPLYGSGFLTSPLYVNAEGPAAEGVITALHYVPTIDNAENKTFAEAFTAATGRVPSEFAVQGYDAARALVEATKT---GAADREALARALRQVS 332
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A840CDL4_9RHOB (Branched-chain amino acid transport system substrate-binding protein n=2 Tax=Actibacterium TaxID=1433986 RepID=A0A840CDL4_9RHOB) HSP 1 Score: 244 bits (624), Expect = 6.790e-76 Identity = 125/269 (46.47%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTE P VGL KTRKLVL DKV+VMAG+++S V AV + ++PL+++NA D TGE C Y+ R S+S+ Q+ P+G WM ++ LA DY A H+ + AF + + A GG I G+ Y PF +TQD+GPY+++A+A+ AVF + GEA+ FVKQYDSFG+K + PL+G LT + AQGPAA G+I+A +YV +D EN+ F A+ +K G P E+AV GYDS R +I+A K DR + A+ KVS
Sbjct: 69 EDTEVSPPVGLAKTRKLVLQDKVDVMAGIVSSGVLGAVRDMVHGSKVPLIVANAGNDEATGESCSPYVVRLSFSNGQVNRPMGQWMFDQGITKVYTLAPDYAAGHQMIDAFAEAFTAAGGEIVGQEYTPFRKTQDFGPYLTKAQASGAEAVFVFYAGGEAISFVKQYDSFGLKTDLPLYGSGFLTSSLYVNAQGPAAEGVITALHYVPTIDSVENKDFVAAFTEKTGRIPSEYAVHGYDSARALIEATKT---GASDRETIAAALGKVS 334
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: UPI0003720C2F (ABC transporter substrate-binding protein n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI0003720C2F) HSP 1 Score: 244 bits (622), Expect = 1.320e-75 Identity = 125/270 (46.30%), Postives = 179/270 (66.30%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAG-EALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTE KP VGL KTRK+VL D+V+V+ G ++S V AV ++ + PL+++NA D TGE C Y+ R S+S++Q+ P+G WM N K+++ LA DY A + + AF + GG + G+ Y PF TQD+GPY+SQA++ NP AV+ VF+AG EA+ FVKQYD+FG+K NT L+G LT P+ A+GPAA G+I + +Y+ LD PEN+ F EA +KK+ P E+ V GYD+ R ++A+K+ G T D+ A+ A+ VS
Sbjct: 68 EDTEVKPPVGLAKTRKMVLEDQVDVLVGPVSSGVLGAVRDFVDQTKTPLIVANAGNDAATGENCSPYIVRVSFSNSQVNRPMGQWMVDNGVKSVYTLAPDYAAGQQQITAFADAFKEAGGEVVGQEYTPFRTTQDFGPYLSQAQSTNPDAVY-VFYAGSEAINFVKQYDAFGLKDNTTLYGSGFLTSPLYVDAEGPAAIGVIGSLHYIPTLDTPENKAFVEAVQKKYDRVPSEYTVQGYDAGRSFVEAIKS--GAT-DKEAIAKALPTVS 333
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: A0A386TJP7_9RHOB (ABC transporter n=2 Tax=Sulfitobacter TaxID=60136 RepID=A0A386TJP7_9RHOB) HSP 1 Score: 243 bits (619), Expect = 4.060e-75 Identity = 123/268 (45.90%), Postives = 173/268 (64.55%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKV 804
EDTE KP V L K +KL+L DKV+VM G+++S V AV + +PL+++NA D TG C Y+ R S+S+ Q+ P+G WM + + ++ LA DY A + + F + + A GG I G+ Y PF +TQD+GPY++QA+++ AVF + GEA+ FVKQYDSFG+KA+ PL+G LT P+ A+GPAA G+I+A +Y +D+PEN F A+K+K G P EFAV GYD+ R +I+A KA G T DR L A+ KV
Sbjct: 67 EDTEVKPPVALGKAKKLILQDKVDVMMGIVSSGVLGAVRDMVHGAGVPLIVANAGNDEATGINCSPYITRMSFSNGQVNRPMGKWMYEQGIRKVYTLAPDYAAGRQMIGGFTETFTAAGGEIVGQEYTPFQKTQDFGPYLAQAKSSGADAVFVFYAGGEAISFVKQYDSFGLKADLPLYGSGFLTSPLYVNAEGPAAEGVITALHYAPTIDNPENAAFVSAFKEKTGRAPSEFAVHGYDAARALIEATKA--GAT-DRETLANALRKV 331
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Match: UPI000B5423C1 (ABC transporter substrate-binding protein n=1 Tax=Thioclava sp. F42-5 TaxID=1973005 RepID=UPI000B5423C1) HSP 1 Score: 241 bits (614), Expect = 2.290e-74 Identity = 117/269 (43.49%), Postives = 174/269 (64.68%), Query Frame = 1
Query: 1 EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVLSNASTDTLTGEKCDRYLFRASYSSAQITEPIGLWMAKNAPKNIFILASDYVAPHEYVAAFKKGYLAGGGSIAGEAYPPFNRTQDYGPYISQARAANPGAVFSVFFAGEALLFVKQYDSFGMKANTPLFGPIGLTPPVLRKAQGPAAAGIISASNYVAELDHPENRTFREAYKKKFGEDPEEFAVMGYDSIRFIIDAVKARNGDTKDRPALVGAIEKVS 807
EDTE KP V L K +KL+L DKV+V++G+++S V A+ + ++PL+++NA D TGE C ++ R S+S+AQ+ P+G W+ K ++ LA DY A H+ + AF + GG I G+ Y PF +TQD+GPY+++A+++ AV+ + GEA+ FVKQYDSFG+KA+ PL+G LT P+ A+GPAA G+ +A +YV +++ N F A+K K G P EFAV GYDS R +++AVK+ DR +L A+ KVS
Sbjct: 67 EDTEAKPPVALGKAKKLILQDKVDVLSGIVSSGVLGAMRDLIDGSKVPLIVANAGNDEATGEACSPWITRLSFSNAQVNRPMGTWLHDQGVKKVYTLAPDYAAGHQMIDAFAASFTEAGGEIVGQQYTPFGKTQDFGPYLAKAQSSGAEAVYVFYAGGEAISFVKQYDSFGLKADLPLYGAGFLTSPLYVNAEGPAAEGVTAALHYVPTIENEANAAFTSAFKAKTGHLPSEFAVQGYDSARALVEAVKS---GASDRASLGAALRKVS 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102420.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102420.542.1 >prot_H-fluviatilis_contig102420.542.1 ID=prot_H-fluviatilis_contig102420.542.1|Name=mRNA_H-fluviatilis_contig102420.542.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=269bp EDTEGKPDVGLNKTRKLVLSDKVEVMAGVINSAVALAVAPYLSSQRIPLVback to top mRNA from alignment at H-fluviatilis_contig102420:5..811+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102420.542.1 ID=mRNA_H-fluviatilis_contig102420.542.1|Name=mRNA_H-fluviatilis_contig102420.542.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=807bp|location=Sequence derived from alignment at H-fluviatilis_contig102420:5..811+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102420:5..811+ >mRNA_H-fluviatilis_contig102420.542.1 ID=mRNA_H-fluviatilis_contig102420.542.1|Name=mRNA_H-fluviatilis_contig102420.542.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1614bp|location=Sequence derived from alignment at H-fluviatilis_contig102420:5..811+ (Heribaudiella fluviatilis SAG_13_90)back to top |