mRNA_H-fluviatilis_contig10241.541.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10241.541.1
Unique NamemRNA_H-fluviatilis_contig10241.541.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: D8LSB8_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB8_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 6.040e-114
Identity = 172/193 (89.12%), Postives = 180/193 (93.26%), Query Frame = 1
Query:    4 YKNEAFWQLLVPPALRWMGQRLWNVLLHSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            YKN AFWQLLVPP LRWMG RLWNVLLHS+GFL MDTDYF+ VLR+NIGP+TFQEA  FDRTGRIVNITVAP+N+TDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPS LLVKDADGSTHPESG I+KFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMAL KSVWS P YSFLVG+VGFLQ Q
Sbjct:  304 YKNSAFWQLLVPPGLRWMGTRLWNVLLHSEGFLSMDTDYFKNVLRHNIGPSTFQEA--FDRTGRIVNITVAPQNKTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSVLLVKDADGSTHPESGPIDKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALSKSVWSSPTYSFLVGIVGFLQTQ 494          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A835ZEF1_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEF1_9STRA)

HSP 1 Score: 311 bits (797), Expect = 8.910e-98
Identity = 152/192 (79.17%), Postives = 168/192 (87.50%), Query Frame = 1
Query:    7 KNEAFWQLLVPPALRWMGQRLWNVLLHSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            KNEAFWQLLVPPALRW G+  W  +L  +G L+MDTDYFR V+R+N+G  TFQEA  FDRTGRI+NI VAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPS LLVK+ADGS  PE    +K+VDGSMEADLPMQQISELFNINHF+VSQVNPHA++ STMAL KSVW+ PVYSFLVGLVGFL+AQ
Sbjct:  325 KNEAFWQLLVPPALRWAGELFWQGVLSGEGLLRMDTDYFRAVMRHNVGGYTFQEA--FDRTGRIMNIIVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSTLLVKEADGSIRPEHSVPQKYVDGSMEADLPMQQISELFNINHFLVSQVNPHATVFSTMALSKSVWNHPVYSFLVGLVGFLKAQ 514          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A7S3PX62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX62_9STRA)

HSP 1 Score: 218 bits (554), Expect = 8.090e-64
Identity = 112/198 (56.57%), Postives = 144/198 (72.73%), Query Frame = 1
Query:   10 NEAFWQLLVPPALRWMGQRLWNVLL---HSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPK---SVWSPPVYSFLVGLVGFLQAQA 585
             +  WQL  P  +R     L+++L     +   L  DT+YFR   R+N+G  TFQEA  FDRTGRI+NITV+P+NR+DPPRLLNYLTAPHVLVWSAAV S+S+PGVFE ++LLVKDADG+   ES +I  F+DGSME DLPMQQ+SE+FNINHFIVSQ NPHA  L++  + K   ++W+  V + L G++ FL+ QA
Sbjct:  276 GKRTWQLFFPIPIRTFTSTLYDILTGHKRAQDVLMNDTEYFRQCCRDNVGDFTFQEA--FDRTGRILNITVSPKNRSDPPRLLNYLTAPHVLVWSAAVASASLPGVFEANSLLVKDADGTERSESATIASFIDGSMEQDLPMQQLSEMFNINHFIVSQANPHAVFLTSFGMSKIGKNIWNNRVMNLLSGVLLFLKNQA 471          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A7S2E766_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E766_TRICV)

HSP 1 Score: 211 bits (538), Expect = 1.090e-63
Identity = 113/185 (61.08%), Postives = 135/185 (72.97%), Query Frame = 1
Query:   37 PPALRWMGQRLWNVLL---HSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            P  LR     +++VL         LK DT++FR   R NIG  TFQEA  FDRTGRI+NI V+P+NR+DPPRLLNYLTAPHVLVWSAAV SSS+PGVFEP+ LLVKDADG+   ES S   F DGSMEADLPMQQ+SE+FNINHFI+SQ NPHA  L++  + KSVW+ P+     GL+ FL+ Q
Sbjct:    2 PAGLRQAAAVMYDVLTGYRRPSEILKSDTEHFRGCCRANIGNFTFQEA--FDRTGRILNIIVSPQNRSDPPRLLNYLTAPHVLVWSAAVASSSLPGVFEPNKLLVKDADGTERYESASPLHFQDGSMEADLPMQQLSEMFNINHFIISQANPHAVFLASFNVNKSVWTSPLVGLAHGLLLFLKNQ 184          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A7S4DA08_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA08_HETAK)

HSP 1 Score: 201 bits (510), Expect = 3.370e-63
Identity = 98/140 (70.00%), Postives = 118/140 (84.29%), Query Frame = 1
Query:  118 YFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPP 537
            YFR+VLR+NIG  TFQEA  FDRTGRI+NITV+P N+TDPPRLLNYLT+PHVLVWSAAVCS+SVPGVF+ S LLVK  DG+  PE+ +   F+DGSME DLP +Q++ELFNINHFIVSQVNPHA+LLS + +  ++WS P
Sbjct:    1 YFRSVLRHNIGNYTFQEA--FDRTGRIINITVSPINKTDPPRLLNYLTSPHVLVWSAAVCSASVPGVFDASTLLVKGPDGALRPETSTGLTFMDGSMEMDLPAEQLAELFNINHFIVSQVNPHAALLSNITMDNALWSHP 138          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A812UTZ9_SYMMI (SDP1L protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTZ9_SYMMI)

HSP 1 Score: 204 bits (520), Expect = 2.100e-61
Identity = 105/202 (51.98%), Postives = 141/202 (69.80%), Query Frame = 1
Query:   25 QLLVPPALRWMGQRLWNVLLHSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPES-------GSIEK---------FVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            Q + P +LRW+G  L+  ++ +   LK+DT + + V+  N G  TFQEA  FDRTGRI+NITVAP N  DPPRLLNYLTAPH+ VWSAAV S ++PGVF+   L+VK+ +G   PE+       GS +          + DGS+E DLPMQQ+SELFN+NHFIVSQVNPH++L ST+++  +VWS P+Y  +VG++ FL+AQ
Sbjct:  192 QYMFPQSLRWLGDMLFGCVMDNKSVLKLDTKHLKEVVIANTGLYTFQEA--FDRTGRIINITVAPTNLYDPPRLLNYLTAPHICVWSAAVASCAIPGVFDAVPLMVKEPNGEFRPENEWTRGGPGSDDDNSHAKAHHHYSDGSIENDLPMQQLSELFNVNHFIVSQVNPHSALFSTLSVEATVWSHPLYGLVVGVLRFLKAQ 391          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: K0TMT0_THAOC (PNPLA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TMT0_THAOC)

HSP 1 Score: 213 bits (542), Expect = 9.420e-61
Identity = 114/202 (56.44%), Postives = 144/202 (71.29%), Query Frame = 1
Query:    1 MYKNEAF---WQLLVPPALRWMGQRLWNVLL---HSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPES--GSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            + K E F   +QL  P  LR +  R+++ L         L  DT +  T LR NIG  TFQEA  FDRTGRI+NITV+P++RTDPPRLLNYLT+PHVL+WSAA+ S+S+PGVFEP+ L+VKDADG+   ES  G    F DGSMEADLPMQQ+SE+FNINHFI+SQ NPHA +  + +L KSVWS P+ +F  G++ FL+ Q
Sbjct:  470 LIKKEGFKRAFQLFFPLTLRQLTSRIYDTLTGFTRPKKILNHDTRHLETCLRANIGDFTFQEA--FDRTGRILNITVSPQSRTDPPRLLNYLTSPHVLIWSAALASASLPGVFEPNRLMVKDADGTERYESTSGIATHFQDGSMEADLPMQQLSEMFNINHFIISQANPHAVMFGSYSLNKSVWSHPLVTFFNGVLRFLKNQ 669          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A7S1FRU7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRU7_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.410e-60
Identity = 108/195 (55.38%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   10 NEAFWQLLVPPALRWMGQRLWNVLLHS----DGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            ++  WQLL P  +R     ++++L       D FL  DTD+F    + NIG  TFQEA  FDRTGRI+NI V+P+NR+DPPRLLNYLTAPHVLVWSAAV S+S+PG+FE S LLVKD+DG+   ES +  +F DGSME+DLPM Q+SE+FN+NHFI+SQVNPHA +L++ +L KS+WS      + G++ FL+ Q
Sbjct:  339 HKRTWQLLFPIGVRRFSSFIYDLLTGGVRAKDIFLN-DTDHFSRCCKTNIGNFTFQEA--FDRTGRILNIAVSPQNRSDPPRLLNYLTAPHVLVWSAAVASASLPGIFEASRLLVKDSDGTERYESSTASRFQDGSMESDLPMDQLSEMFNVNHFIISQVNPHACMLASFSLSKSIWSNAFVGVVNGILQFLKKQ 530          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A448ZAC2_9STRA (PNPLA domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAC2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.550e-60
Identity = 112/205 (54.63%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 MYKNEA--------FWQLLVPPALRWMGQRLWNVLL---HSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            +YKN A         WQ+ VP  LR     L+++L         L  DT++FR  LR N+G  TFQEA  FDRTGRI+NITV P N +DPPRLLNYLTAPHVLVWSAAV SSS+PG+FE + LLVKDADG+   ES     F DGSME DLPMQQ+SE+FN+NHFI+SQ NPHA +L++ +  KS+WS P+   +  ++ FL+ Q
Sbjct:  280 VYKNTAGFFHDAKRTWQIFVPIQLRNFTSILYDLLTLKTRPQELLMSDTEHFRECLRVNVGDFTFQEA--FDRTGRILNITVTPNNSSDPPRLLNYLTAPHVLVWSAAVASSSLPGIFESNRLLVKDADGTVRYESAEGACFSDGSMEQDLPMQQLSEMFNVNHFIISQANPHAVMLASYSHSKSIWSTPLIGLVNSILIFLKDQ 482          
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Match: A0A1E7FWH0_9STRA (Patatin-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWH0_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.190e-59
Identity = 107/205 (52.20%), Postives = 138/205 (67.32%), Query Frame = 1
Query:    1 MYKNEA--------FWQLLVPPALRWMGQRLWNVLL---HSDGFLKMDTDYFRTVLRNNIGPATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCSSSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFNINHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQ 582
            +YKN A         WQ+ +P   R +   L+++L         L  DT++FR  LR N+G  TFQEA  FDRTGRI+NITV P N +DPPRLLNYLTAPHVLVWSA V SSS+PGVFE + L+VKDADG+   E     +F DGSME DLPMQQ+SE+FN+NHFI+SQ NPHA + ++ +  KS+WS P+   +  ++ FL+ Q
Sbjct:  211 VYKNNAGFFHDAKRTWQVFIPIPFRNLTSILYDLLTLKTRPQELLMSDTEHFRECLRINVGDFTFQEA--FDRTGRILNITVTPNNSSDPPRLLNYLTAPHVLVWSATVASSSLPGVFESNRLMVKDADGTVRYECAEGARFSDGSMEQDLPMQQLSEMFNVNHFIISQANPHAVMFASYSHLKSIWSSPLTGLVNSILIFLKDQ 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10241.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSB8_ECTSI6.040e-11489.12PNPLA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835ZEF1_9STRA8.910e-9879.17Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
A0A7S3PX62_9STRA8.090e-6456.57Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2E766_TRICV1.090e-6361.08Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4DA08_HETAK3.370e-6370.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A812UTZ9_SYMMI2.100e-6151.98SDP1L protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
K0TMT0_THAOC9.420e-6156.44PNPLA domain-containing protein n=1 Tax=Thalassios... [more]
A0A7S1FRU7_9STRA1.410e-6055.38Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZAC2_9STRA5.550e-6054.63PNPLA domain-containing protein n=2 Tax=Pseudo-nit... [more]
A0A1E7FWH0_9STRA1.190e-5952.20Patatin-domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10241contigH-fluviatilis_contig10241:4398..8035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score356.7
Seed ortholog evalue7e-96
Seed eggNOG ortholog2880.D8LSB8
Preferred nameTGL3
KEGG rclassRC00004,RC00020,RC00037,RC00041,RC00055,RC00094,RC00523
KEGG koko:K14674,ko:K14675,ko:K21596
KEGG ReactionR01315,R01317,R01462,R02053,R02241,R02250,R02687,R07064,R07379,R07387,R07859
KEGG Pathwayko00100,ko00561,ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00100,map00561,map00564,map00565,map00590,map00591,map00592,map01100,map01110
KEGG ModuleM00089,M00098
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0004771,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005811,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006642,GO:0006644,GO:0006793,GO:0006796,GO:0007114,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012511,GO:0016042,GO:0016298,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0019433,GO:0019637,GO:0019954,GO:0032505,GO:0042171,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0047499,GO:0051301,GO:0052689,GO:0071617,GO:0071618,GO:0071704,GO:1901575
EggNOG free text desc.triglyceride mobilization
EggNOG OGsCOG1752@1,KOG2214@2759
Ec32 ortholog descriptionPatatin/Phospholipase A2-related
Ec32 orthologEc-21_003120.1
EC2.3.1.51,3.1.1.13,3.1.1.3,3.1.1.4
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03000
Hectar predicted targeting categoryother localisation
Exons4
Model size586
Cds size585
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10241.541.1prot_H-fluviatilis_contig10241.541.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10241 4398..8035 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929063.7542307-CDS-H-fluviatilis_contig10241:4397..45081622929063.7542307-CDS-H-fluviatilis_contig10241:4397..4508Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 4398..4508 -
1691135168.608489-CDS-H-fluviatilis_contig10241:4397..45081691135168.608489-CDS-H-fluviatilis_contig10241:4397..4508Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 4398..4508 -
1622929063.7666714-CDS-H-fluviatilis_contig10241:5086..52011622929063.7666714-CDS-H-fluviatilis_contig10241:5086..5201Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 5087..5201 -
1691135168.6240008-CDS-H-fluviatilis_contig10241:5086..52011691135168.6240008-CDS-H-fluviatilis_contig10241:5086..5201Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 5087..5201 -
1622929063.854649-CDS-H-fluviatilis_contig10241:7373..75581622929063.854649-CDS-H-fluviatilis_contig10241:7373..7558Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 7374..7558 -
1691135168.6338356-CDS-H-fluviatilis_contig10241:7373..75581691135168.6338356-CDS-H-fluviatilis_contig10241:7373..7558Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 7374..7558 -
1622929063.8650937-CDS-H-fluviatilis_contig10241:7861..80351622929063.8650937-CDS-H-fluviatilis_contig10241:7861..8035Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 7862..8035 -
1691135168.6439128-CDS-H-fluviatilis_contig10241:7861..80351691135168.6439128-CDS-H-fluviatilis_contig10241:7861..8035Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10241 7862..8035 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10241.541.1

>prot_H-fluviatilis_contig10241.541.1 ID=prot_H-fluviatilis_contig10241.541.1|Name=mRNA_H-fluviatilis_contig10241.541.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=195bp
MYKNEAFWQLLVPPALRWMGQRLWNVLLHSDGFLKMDTDYFRTVLRNNIG
PATFQEACAFDRTGRIVNITVAPRNRTDPPRLLNYLTAPHVLVWSAAVCS
SSVPGVFEPSALLVKDADGSTHPESGSIEKFVDGSMEADLPMQQISELFN
INHFIVSQVNPHASLLSTMALPKSVWSPPVYSFLVGLVGFLQAQA
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mRNA from alignment at H-fluviatilis_contig10241:4398..8035-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10241.541.1 ID=mRNA_H-fluviatilis_contig10241.541.1|Name=mRNA_H-fluviatilis_contig10241.541.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=3638bp|location=Sequence derived from alignment at H-fluviatilis_contig10241:4398..8035- (Heribaudiella fluviatilis SAG_13_90)
ATGTACAAGAATGAGGCCTTCTGGCAGTTGCTGGTGCCGCCGGCGCTTCG CTGGATGGGGCAGCGCTTGTGGAACGTTCTGCTGCACAGCGACGGGTTCC TAAAGATGGACACCGACTACTTTCGCACAGTGCTGCGGAACAACATCGGT CCAGCTACTTTCCAGGAGGCATGTGTTGTTGTCGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGCATTGTTTTGCTTTGTTGTGTTTCGTT TTCGTTTCTCTTCCTTTCCTTGGCATTTAGATCTAGAATTCATCCATCAA TCAAACCCTGTCGGTGACGTAGAGCACGAAGAAGCACCCCCCACCTACGC GAAGCGTGCGCAAAACGCACAACGACGCAAAACTCCGGATTTTTGCAGGT ACGAAGTACAAAACAAGACAAAACAAAACAAAACAAAACAAAATATTTAT CGTGTTTGCGTTTGGAAAATCGGGCAGGCTTTCGACCGCACGGGACGCAT CGTGAACATCACCGTGGCGCCGAGGAACCGCACGGACCCCCCTCGCTTGC TCAACTACCTGACCGCGCCGCACGTGTTGGTTTGGAGCGCCGCGGTGTGC AGCAGCAGCGTACCTGGAGTGTTCGAGCCTTCGGCCCTGTTGGTGAAAGA TGCCGACGGCAGGTGAAGCGCCCCCTCATCCCCCCCTTTTAAAGTTGAAT GTGTGATTGAGTAGATAGATCTGTACGTTGAAAGCACGAAGTCCATCTCA AGAGTCAGGTTGTGGGTGACTTAAAGCATGTTTTACGGTATCGTGGGTAC ATCCAGTATACTTGAGCACGTATTACGCAGACCAATTTATGCTCCGACTT CGTCACGTGTGCGTGTGTGTACTTGCACCCCCCACCCCCCGCCCTTTTCG GATGTACAGTCCGTGTCACGGCGTCAGGCCACGTACTGTAACGTCAAGCT CAATCGACCGGCCTTAATATCGAAACCTGAGTTACGTCCTGGGTGGCTAC TTGTACGGGACTGTACAGGGTGTGACAGGCCAAGCTGACCGGCCTTTAAG TCGGTGATGGTCTTACACTGGGTGGTCTTAAATCTTGACACCCCTACCGT AAAAGAGGTACTTAAGTAGCAGATTCGGCATGTTGGATGAACTCGACCCG CCTCAATTTTCCAGGTGTCGGTAACAGCACGCGCTTACCGTATGATGCTG TACGGCATTGTACGGTGCAAATGGGGGCGGGTGATACGGACTACCCCCCC CCCTCCCCCATCGCCCCGCTCTCCAGACACGGCAAATATGCGATTGTAGG GTGCTCTTTGGTGTTAAGTATTGTCCTGAGCACCCGGGTCAACAGAAGCC CGGGCCTATACACAAGGAAATTTAGAGATGAGACTCGCCGCGCCGTAAAC GTTTTGTGTACACTTTTGTTCTCCGAACCCCTGACACGGCCAGCGGAGAC AGTCATGGGAAAACAACGAAGCTGCCCGTGGAGCTGGATGTCTGTTTTCT CAATGAGAGGATCGATGCTGTAGTGTGGACTCCCATCTTTTGCTCTGTTG GGGTTGTGGTGATGCGGGTGATGAAAATGTTTGACGTTGTTCAAAGACGA CGTCCTTTCTCTTTTGTGATTTTATCAAACCTGGTTTATTTATTTATTTA TTTTCGTCCATCTCTCGCTCCGTCGAGTATGTGGCTTTCCTCTTTTTGTT TTTGTGTGTGGTGACTTCTTGGCGTGCATCAACGTCGTTTGAAAGTCGTC GAGCAACGACGAGGTACTGTGGTGCAACAATCTATATCTCGTTGCGATAG CTTAAAACTCTCGGCACGGCACAGCCAGAACGCTCATCCCGTCCCCCCAG TCAAGCCTTTGCTAATGAGGGTAAATATTGTAGATGATACTCGGAAAGTG GGTCAAAATATATGCAGGCAAAACGCCCATGTTTTGCGACGCAGCGCGCG CAAGATACGGCAACGTCCTCGGTGCCTTTTCGGTGGACGCTGACTGGATC GGTGGTAAATTGTGTGCAAAGTGTGATTTGGCTCTAATTGAACGTGAGCG AATCTTAGGCTTCGGAGCACCACGTTCCTCCACGTGCCCTGTTCTAGTCT CGCAAAATTAAGATGCTGACGAGGAAGGCATACAGTTGGGGGGCCCCGAT TTGAAGACGGGGGGTGTGCCTAAGCCCAGAAAGCCTTAAATCCTGATTTG CCATTGCTCTGGCTGCTTTGCTTTTTCCAGGAATCATATAGGATGTGTCC AGCCCATTCGGGCCGCCTTGAAATCTCGACCCGTCTTGAACTTTGATAGC GTTAAATCGACCCCTACCCCCCTCGTTGTACCGGGACCCGTGGCGGCGGC AAAGATGTCGATCTTCTTATCTTGACGTCTTGTGTGGGCATCCCAGTGTT TCCTCAAGCCTGTGAACGCTAGAATGTCATCGTATCGTCCCCCCCCCCCC CCCCCCCCCCCGCACAAAATAAGTCTANNNNNNNNNNCCCCCTTTTTTCC CCAACCCGTGGAACCCAGAAATGTTTCCTTTCTTCCCCCCCCCCCCCCCC GCCAAGACAGTGAAATCGTACTGACCAATCTCTACGTTTCTTTACAACTT AAAGAGAAAAACGGGTCATACATCACTTTGGTGTCACCAATGTGAAGCGA AAATCAAGTTCGCCACCATCGGAGCATGAGTGAAACCCCAAGTATTAGGC TAATGTTATAAGGTTTCACCTTGAACGGTGCGGACAGAGTCTCACCGGTC AGCACGATTGAAGGCGTGCGTGTGCGTACCACAATTCGTATATGGTTCTG GGCATCATTTTTTTTTTTTTCTCTTCATTTGCAGCACTCATCCGGAGTCT GGGTCGATCGAGAAGTTCGTAGATGGCAGCATGGAGGCGGACCTGCCCAT GCAGCAGATCAGCGAGCTTTTTAACATCAACCACTTTATCGTCTCCCAGG TAAATATTGTCCGAAAGCAAAAAAATGTTGCGATGTTTGAGCGCGCGACG AGGCAGAGAGAGAGAGGGAGCTTGCAACGACCGGATAAGTGTTCGATATG TGCTTACGCATGCCGAAGATGGGGTTGTCTCCGTAGTGCACGAAAAACGC CCCCACCTGTATATTTTTTGTGTGCTTCGCCCCCGTGGCTGTAGCCACCT CGCTGACGTTATGCACGTAAAGGGTGATGGAAGATTTTGTCCAGAGCGAT TTTTGTTTTAATCGTCCGGGAACAACACTCGGACGCAAACGAAACACAAC AGCGATAGAGATACAGCGATAGAGATGCATTCCGTTTCTTGTCCTCCGGG GTGTCTTGCCGCACCCTCCCCGAGCGAACGAGCGTCGTGTCGATGGCAAA ATCCAAAGCGAACATGACCTGACAGTCAGACCCCCGACATCCTAACCATG CAATGACTATTTGTTAGCCATTTTTGCGCCAACTACAGCAACACCCGAGT TATGCACCACCTCCCCCTTGTCGGGACTGGGTGCCCCCCCCCCTCCCTCT CTCTCTTTCTGCGCACATGGCGTTCAGGTGAACCCGCACGCGTCCCTCCT GTCTACGATGGCTCTGCCGAAGAGCGTGTGGAGTCCACCGGTGTACAGCT TTTTGGTGGGATTGGTCGGCTTCCTTCAGGCACAGGCG
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10241:4398..8035-

>mRNA_H-fluviatilis_contig10241.541.1 ID=mRNA_H-fluviatilis_contig10241.541.1|Name=mRNA_H-fluviatilis_contig10241.541.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1170bp|location=Sequence derived from alignment at H-fluviatilis_contig10241:4398..8035- (Heribaudiella fluviatilis SAG_13_90)
ATGTACAAGAATGAGGCCTTCTGGCAGTTGCTGGTGCCGCCGGCGCTTCG
CTGGATGGGGCAGCGCTTGTGGAACGTTCTGCTGCACAGCGACGGGTTCC
TAAAGATGGACACCGACTACTTTCGCACAGTGCTGCGGAACAACATCGGT
CCAGCTACTTTCCAGGAGGCATGTATGTACAAGAATGAGGCCTTCTGGCA
GTTGCTGGTGCCGCCGGCGCTTCGCTGGATGGGGCAGCGCTTGTGGAACG
TTCTGCTGCACAGCGACGGGTTCCTAAAGATGGACACCGACTACTTTCGC
ACAGTGCTGCGGAACAACATCGGTCCAGCTACTTTCCAGGAGGCATGTGC
TTTCGACCGCACGGGACGCATCGTGAACATCACCGTGGCGCCGAGGAACC
GCACGGACCCCCCTCGCTTGCTCAACTACCTGACCGCGCCGCACGTGTTG
GTTTGGAGCGCCGCGGTGTGCAGCAGCAGCGTACCTGGAGTGTTCGAGCC
TTCGGCCCTGTTGGTGAAAGATGCCGACGGCAGGCTTTCGACCGCACGGG
ACGCATCGTGAACATCACCGTGGCGCCGAGGAACCGCACGGACCCCCCTC
GCTTGCTCAACTACCTGACCGCGCCGCACGTGTTGGTTTGGAGCGCCGCG
GTGTGCAGCAGCAGCGTACCTGGAGTGTTCGAGCCTTCGGCCCTGTTGGT
GAAAGATGCCGACGGCAGCACTCATCCGGAGTCTGGGTCGATCGAGAAGT
TCGTAGATGGCAGCATGGAGGCGGACCTGCCCATGCAGCAGATCAGCGAG
CTTTTTAACATCAACCACTTTATCGTCTCCCAGCACTCATCCGGAGTCTG
GGTCGATCGAGAAGTTCGTAGATGGCAGCATGGAGGCGGACCTGCCCATG
CAGCAGATCAGCGAGCTTTTTAACATCAACCACTTTATCGTCTCCCAGGT
GAACCCGCACGCGTCCCTCCTGTCTACGATGGCTCTGCCGAAGAGCGTGT
GGAGTCCACCGGTGTACAGCTTTTTGGTGGGATTGGTCGGCTTCCTTCAG
GCACAGGCGGTGAACCCGCACGCGTCCCTCCTGTCTACGATGGCTCTGCC
GAAGAGCGTGTGGAGTCCACCGGTGTACAGCTTTTTGGTGGGATTGGTCG
GCTTCCTTCAGGCACAGGCG
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