mRNA_H-fluviatilis_contig10237.531.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
|
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.160e-50 Identity = 98/234 (41.88%), Postives = 134/234 (57.26%), Query Frame = 1
Query: 19 KRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSREDPTRDFDDKVAIWRVCVITQAQRSTAR-------------------RNK----DDEYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEEL 651
KR+R+DF ++V + ++ N H+DESWFYL+ + E+VR+F GE+ G +V H+ H+PK+M I A +R DP DFD K+ IWR+CVI AQRS+ + RN+ +EYE D IDA WY +W ++ LP +++KMPWL+ R + K E G GW +LVT+PAQSPDLN NDLG FASLK RVW S++EL
Sbjct: 130 KRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDEL 363
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: B9FLL3_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FLL3_ORYSJ) HSP 1 Score: 116 bits (290), Expect = 5.590e-24 Identity = 83/272 (30.51%), Postives = 128/272 (47.06%), Query Frame = 1
Query: 73 FVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSR----EDPTRDFDDKVAIWRVCVITQAQRSTARRNKDDEYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGMLLKRVKIDRDVYGAELKLWVD 876
F+ N HIDE WF + + P E T VQ+K I KVMF+ AV+R ++ FD K+ IW AQRS+ R + + +D + LP + P R + ART V E G G + +LV +P SPD+N DLG FASL+S ++EEL V + +++Y+ +TL R++ + Y +V+KA GGN +++ H + + + G+L K + D +Y ++L VD
Sbjct: 274 FIEMENIIHIDEKWFNATKKDKTYYLHPLEPEPYRT-VQNKNAIEKVMFLSAVARPRFDDEGNCTFDGKIGIWPFVRKEPAQRSSRNRERGTLVTKTIKVDRDTMKSFMISKVLPAIRACWPQEDARRTIFIQQDNARTHVPIDDEQFGVAVGQMGLDIRLVNQPPNSPDMNCLDLGFFASLQSLTSTRVSSNMEELIENVHKEYNDYNPNTLNRVFVTLQSCYIEVMKASGGNKYKIPHMNKERLEALGILPKALCCDHQLYERAIQLLVD 544
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.650e-19 Identity = 70/234 (29.91%), Postives = 109/234 (46.58%), Query Frame = 1
Query: 97 HIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSRED----PTRDFDDKVAIWRVCVITQAQRSTARRNKDDEYECDVNIDAGWYHEWCTEIFLPEVEDKMP--WLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEH 780
H+DE WF+L D + GEE + S +HK HIPK+MF+ AV R ++ FD K+ I+ + A+RS+ + K + Y + LP + K P W + Y AR + G N KLVT+PA SPDLN DLG FA++++ +R+ +++E V E +D L+ +W S +R + ++ G N ++EH
Sbjct: 154 HLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRWKTL----YIQQDGARPHCTDGCPELVASAASFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEH 382
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: A0A6A3KJZ0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KJZ0_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.480e-19 Identity = 75/272 (27.57%), Postives = 130/272 (47.79%), Query Frame = 1
Query: 16 HKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTK-VQHKCHIPKVMFICAVSR---EDPTRD-FDDKVAIWRVCVITQAQRSTARRNKDDEYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGML 816
++ R+ F ++ + + + NT H+DE+ F++ R + PGE V T+ V+ + +I +VM + AV+R + T++ FD+K+ +W A+RS+ RR +V++ YH+ LP +E + P APAR +K T+ G + +L +PA SPDLN DLGLF ++++R + +L+EL + + E T+ + S Q +K RG N ++ H K +R+G L
Sbjct: 67 NRNTRLHFCVSHIDRDTLLYADMLNTVHVDENIFHVTETTRRFLLLPGE--VAPTRCVKSRRYITRVMVLAAVARPRVDTVTQNYFDEKLGVWAFMEKAPAKRSSRRRPAGTLETKEVSVTKATYHDMLISRVLPSIEARWPNASGAVVIQQDNAPAR--IKPDDPQFTEAAACCGRHVELRFQPANSPDLNALDLGLFCAIQARQRKTIARTLDELIEAITESYWELPARTINAAFISLQDSMDQCIKQRGDNAYKPRHMKKAKLEREGRL 334
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663) HSP 1 Score: 99.0 bits (245), Expect = 1.160e-18 Identity = 77/274 (28.10%), Postives = 128/274 (46.72%), Query Frame = 1
Query: 16 HKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSREDPTRD------FDDKVAIWRVCVITQAQRSTARRNKDDEYECDV-NIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGML 816
+K+ R++F L+ V +S TF FN HIDE WFY+ +R + P E T + K I KVMF+ AV+R P D F K+ I+ + A+RS+ R + ++ W E LP + K P P + A+ + ++ G++ +L +P SPDLN DLG F +++S +E S++EL + VK + ++ L ++ + +++K RGGN+++ H K +R+G L
Sbjct: 118 NKKARLEFCLSTVTRSL-TFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRT-CKSKKFITKVMFLAAVAR--PRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHT-GPIFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKL 386
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: A0A6A3RHW4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RHW4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.890e-18 Identity = 75/271 (27.68%), Postives = 118/271 (43.54%), Query Frame = 1
Query: 16 HKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSRE--DPTRD--FDDKVAIWRVCVITQAQRSTARRNKDDEYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGML 816
+K R+ F+L+ + + + +T H+DE FY+ R + PGEE +++ K +I KVMF+ AV R DP FD K+ IW AQRS+ARR D+++ Y LP + + P RP A + + G L +P +PDLN NDLGLFAS+++R ++ + +EL V + E T+ + S + G N+++ H K +R+G L
Sbjct: 141 NKAERLQFSLSHIQRDTMLYDKMLDTVHVDEKLFYITQPTRRFLLLPGEE-APIRRLRSKRYITKVMFLAAVGRPRFDPATQQFFDGKLGIWPFVEHVPAQRSSARRPAGTIITKDISVTKTSYRAMLIAKLLPALCEHWPEDTDGRPIVVQQDNAPAHIASEDQVFADAVAACGRRVVLRNQPPNNPDLNCNDLGLFASIQARQQKKNARTTDELIAAVTESYWELPMRTINATFLSLQGSMDDCIAQDGDNNYKPRHMKKAKLEREGRL 410
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: UPI000B4246FA (uncharacterized protein LOC110435039 n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI000B4246FA) HSP 1 Score: 97.4 bits (241), Expect = 3.090e-18 Identity = 76/265 (28.68%), Postives = 117/265 (44.15%), Query Frame = 1
Query: 73 FVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSREDPTRD------FDDKVAIWRVCVITQAQRSTARRNKDDEYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGMLLKRVKIDRDVY 849
F+ +N H+DE WF S + M P EE V +K I KVMF+ AV R P D FD K+ +W QA+R + R + E + +D + L + + P Y A + V E G + +L+ +PA S DLN DLG F SL+S + +L++L V+ + YD DTL R++ + +V+K GGN +++ H + + GML + + DR +Y
Sbjct: 119 FMDMYNIIHMDEKWFNTTSKYMKYYMLPEEEDPHRI-VHNKNRIGKVMFLSAVGR--PIYDDAGNCIFDGKLGVWPFVRKEQARRKSRNRGRGAEVTKPIKVDRSTMRSYLISKVLDAIVRRWPREHAGTTIYIQQDNAPSHVPINDEEFATAVKQTGLDIRLINQPANSLDLNVLDLGFFNSLQSLTYDRISRNLDDLIVNVEHEFENYDPDTLNRVFLTLQGCLIEVMKDGGGNRYKIPHIDKDRLESLGMLPRSLGCDRKLY 380
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: UPI001CB94040 (uncharacterized protein LOC122597462 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94040) HSP 1 Score: 94.4 bits (233), Expect = 1.330e-17 Identity = 76/275 (27.64%), Postives = 129/275 (46.91%), Query Frame = 1
Query: 16 HKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGE-ERVGSTKVQHKCHIPKVMFICAVSREDPTRD------FDDKVAIWRVCVITQAQRSTARRNKDDEYECDV-NIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGML 816
+K+ R++F L+ V +S TF FN HIDE WFY+ + + P E E + + K+ K I KVMF+ AV+R P D F K+ I+ + A+R + R + ++ W E LP + K P P + A+ + ++ G++ +L +P SPDLN DLG F +++S +E S++EL + VK + ++ L ++ + +++K RGGN+++ H K +R+G L
Sbjct: 25 NKKARLEFCLSTVTQSL-TFHDMFNVIHIDEKWFYMSKPSKCYYLVPNEIEPLRTCKL--KKFITKVMFLAAVAR--PRFDASGNEVFSGKIGIFPFTTLEPAKRLSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHT-GPIFIQQENAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLKKQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKL 293
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC) HSP 1 Score: 96.7 bits (239), Expect = 1.930e-17 Identity = 77/274 (28.10%), Postives = 126/274 (45.99%), Query Frame = 1
Query: 16 HKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSREDPTRD------FDDKVAIWRVCVITQAQRSTARRNKDDEYECDV-NIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGML 816
+K+ R++F L+ V +S TF FN HIDE WFY+ +R + P E T + K I KVMF+ AV+R P D F K+ I+ + A+RS+ R + ++ W E LP + K P P + A+ + ++ G++ +L +P SPDLN DLG F ++S +E S +EL + VK + ++ L ++ + +++K RGGN+++ H K +R+G L
Sbjct: 321 NKKARLEFCLSTVTRSL-TFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRT-CKSKKFITKVMFLAAVAR--PRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKWPRDHT-GPIFIQQDNAKPHIDVNDAEFNEEASKDGFDIRLCFQPPNSPDLNVLDLGFFRVIQSLQEQEVLGSNDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKL 589
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 95.9 bits (237), Expect = 2.010e-17 Identity = 77/265 (29.06%), Postives = 114/265 (43.02%), Query Frame = 1
Query: 70 TFVSGFNTTHIDESWFYLVSDGERVRMFPGEERVGSTKVQHKCHIPKVMFICAVSR----EDPTRDFDDKVAIWRVCVITQAQRSTARRNKDD-EYECDVNIDAGWYHEWCTEIFLPEVEDKMPWLKVPRPSYSSTAPARTRVKERRES*TKQGGGGGWNFKLVTRPAQSPDLNFNDLGLFASLKSRVWRERFDSLEELNTRVKRVHDEYDTDTLERLWQSPPKRYSQVLKARGGNDFEVEHRSIRKRQRKGMLLKRVKIDRDVY 849
TF ++ HIDE WF + + P E T Q K HIPK+MF+ AVSR D +D K+ I+ QA+RS+ R E + +I+ + E LP +++K W R A+ V + G WN KL +P SPDLN DLG F S + + LEEL V + ++ + L ++ + +VLK +GGN+F++ H R G L + + VY
Sbjct: 202 TFHHFYDYIHIDEKWFNITKEKTTFYALPDEPDPYRT-AQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKRSSKNRPAGTLEVKATTSINRDEIKKMLLEKLLPAIKEK--WPGPTRDVIIQQDNAKPHVDVNDTDFVQAAQEGNWNIKLQFQPPNSPDLNVLDLGYFRSFDTIQDQAAPRKLEELINAVTKSFEDLTPEKLNNVFLTCQSVMGEVLKHKGGNNFKIPHIGKSSLARLGRLPDNIGVTAQVY 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10237.531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10237.531.1 >prot_H-fluviatilis_contig10237.531.1 ID=prot_H-fluviatilis_contig10237.531.1|Name=mRNA_H-fluviatilis_contig10237.531.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=166bp MMKHKRNRVDFTLNQVAKSRKTFVSGFNTTHIDESWFYLVSDGERVRMFPback to top mRNA from alignment at H-fluviatilis_contig10237:116..1717+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10237.531.1 ID=mRNA_H-fluviatilis_contig10237.531.1|Name=mRNA_H-fluviatilis_contig10237.531.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1602bp|location=Sequence derived from alignment at H-fluviatilis_contig10237:116..1717+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10237:116..1717+ >mRNA_H-fluviatilis_contig10237.531.1 ID=mRNA_H-fluviatilis_contig10237.531.1|Name=mRNA_H-fluviatilis_contig10237.531.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=996bp|location=Sequence derived from alignment at H-fluviatilis_contig10237:116..1717+ (Heribaudiella fluviatilis SAG_13_90)back to top |