mRNA_H-fluviatilis_contig10236.529.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10236.529.1
Unique NamemRNA_H-fluviatilis_contig10236.529.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A836KV71_9TRYP (Protein kinase domain-containing protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836KV71_9TRYP)

HSP 1 Score: 75.5 bits (184), Expect = 3.150e-11
Identity = 68/229 (29.69%), Postives = 98/229 (42.79%), Query Frame = 2
Query:  287 SRVNNHINLFLDTLSSET----LDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPS-AHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAVTS 958
            SR   H+  +LD +        ++  A   S  R  K+   L+E + C Y+ QVL+AL H    GI + GDL+  ++LL    +VKL  F L     + HQ+A     +AS SS                                      TE+S      P+  + G   A  A S F  +  W APE L G       +++WS+GCL VELL +G+ P+ ERA+ S
Sbjct:   68 SRHCPHVVKYLDHMQQHDRFFLVEEYAVHGSLLRRLKEGGRLAEDIACRYLYQVLTALYHMAPWGI-VHGDLKASNILLFDSDIVKLTDFALRPRGEDEHQDAERRTTAASTSS--------------------------------------TEASYLTRGSPAGKAAGDEGAGTALSEFRGSAYWAAPEVLAGSSRATASSEIWSVGCLAVELL-TGSPPYFERAIHS 256          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A4HBM5_LEIBR (Protein kinase domain-containing protein n=4 Tax=Viannia TaxID=37616 RepID=A4HBM5_LEIBR)

HSP 1 Score: 74.7 bits (182), Expect = 5.670e-11
Identity = 58/184 (31.52%), Postives = 83/184 (45.11%), Query Frame = 2
Query:  401 SESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAV 952
            +E ++C YV QVL+AL H    G+ + GDL+  ++LL  G VVKL  F L     + H++A     ++S SS  +SS    S  G +                       +E  A I               A S F  +  W APE L G       +D+WS+GCL+VELL +G  P+ ER +
Sbjct:  110 AEDIVCQYVYQVLTALYHMAPWGV-VHGDLKASNILLFDGDVVKLNDFALRSRAEDEHEDAERHITASSTSSAEASSLTRGSRAGRST----------------------SEEGAGI---------------ALSGFRGSAYWAAPEVLSGASKATAASDIWSVGCLVVELL-TGTPPYFERTI 254          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A836I6P8_9TRYP (Protein kinase domain-containing protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836I6P8_9TRYP)

HSP 1 Score: 74.3 bits (181), Expect = 7.540e-11
Identity = 65/221 (29.41%), Postives = 96/221 (43.44%), Query Frame = 2
Query:  302 HINLFLDTLSSET----LDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAV 952
            H+  +LD +        ++ +    S  R  K +  L+E V C Y+ QVL+AL H    G+ + GD++  +VLL  G VVKL  F L R   E  +E   P A+A+      SS+P  +  G+                                      +T   A + PS F  +  W APE L G       +D+WS+GCL VELL +G+ P+ +R V
Sbjct:   73 HVVEYLDHMQQHNRLFLVEELTEHGSLLRRLKKDSKLTEGVACHYIFQVLTALYHMEPCGV-VHGDIKASNVLLFDGDVVKLTDFAL-RSHGEDEREDAEPRATAA---RTPSSEPSPTTRGSRVGR---------------------------------GATDEGAGSTPSQFRGSAYWAAPEVLAGASRATPASDIWSVGCLAVELL-TGSPPYFDRTV 254          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: Q4QCI8_LEIMA (Protein kinase domain-containing protein n=10 Tax=Leishmania TaxID=38568 RepID=Q4QCI8_LEIMA)

HSP 1 Score: 72.0 bits (175), Expect = 4.350e-10
Identity = 62/221 (28.05%), Postives = 94/221 (42.53%), Query Frame = 2
Query:  302 HINLFLDTLSSET----LDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAV 952
            H+  +LD +        ++      S  R  K+N+ L E   C Y+ QVL+AL H    G+ + GDL+  ++LL    VVKL  F L     + H++A     +AS +S  + + PP                              + +  D   + S ++         S F  +  W APE L G       +D+WS+GCL VELL +GA P+ ER V
Sbjct:   73 HVVKYLDHMQQHDRLFLVEEFTEHGSLLRCLKENKKLPEDTACRYIYQVLTALYHMAPWGV-VHGDLKASNILLFDNDVVKLTDFALRSHGEDDHEDAERRTTAASTAS--AEALPP---------------------------MRGSRAGRDAGEECSGSAL--------SEFRGSAYWAAPEILAGASKATAASDIWSVGCLAVELL-TGAPPYFERPV 254          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A640KFN2_LEITA (Protein kinase, putative n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KFN2_LEITA)

HSP 1 Score: 70.1 bits (170), Expect = 1.840e-9
Identity = 66/226 (29.20%), Postives = 89/226 (39.38%), Query Frame = 2
Query:  302 HINLFLDTLSSET----LDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISP--QPSFASTGPSAHAAPSV---FDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAV 952
            H+  +LD +        ++      S  R  K    LSE V+C Y+ QVL+AL H    G+ + GDL+  ++LL  G VVKL  F L       H++A     +AS                                            SAD  P  + S A  G     A      F  +  W APE L G       +D+WSLGCL VELL +G+ P+ ER V
Sbjct:   73 HVVKYLDHMQQHDRLFLVEEFTEHGSLLRCLKKKGKLSEDVVCRYIHQVLTALYHMAPWGV-VHGDLKASNILLFDGDVVKLTDFALRSRSENGHEDAERRVTAAST------------------------------------------PSADTPPPIRGSHAGRGTGEECAGLALLEFRGSPYWAAPEVLAGSSKATTASDIWSLGCLAVELL-TGSPPYFERPV 254          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A1Y1X4C9_9FUNG (Pkinase-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X4C9_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 2.060e-9
Identity = 63/285 (22.11%), Postives = 114/285 (40.00%), Query Frame = 2
Query:  101 LCAVGMWRTQHVMLDP-QGVTCLLKQMDLVERPRGR-----LLAQCAQRERQSFEAAHHPNVLRLLRFSRVNNHINLFLDTLSSETLDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPW 937
            L   G +   ++ L+P  G     KQ++L +   G       + +  QRE    +   HPN++R L       H+N+FL+ +   ++  +          K      E+++ S+VRQ+L  L + H R I  R D++G ++L+D  G VK++ FG+++     + E T+P                                              T + A +                      ++ W +PE ++   + + KAD+WSLGCL+VE+  +G  P+
Sbjct:  397 LIGTGSFGNVYLGLNPFSGELMAAKQVELPKNDGGNEERKIAMLEALQREIALLKGLKHPNIVRYLGSQMDEEHLNIFLEYVPGGSVAALLE--------KFGNAFEETLVRSFVRQILMGLTYLHDRNIIHR-DIKGGNILVDNKGCVKISDFGISKKA--ENTELTVP----------------------------------------------TNARASL--------------------QGSVFWMSPEVVKNTHYTK-KADIWSLGCLVVEMF-TGEHPF 602          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A836I3Q5_9TRYP (Protein kinase domain-containing protein n=4 Tax=Mundinia TaxID=2249475 RepID=A0A836I3Q5_9TRYP)

HSP 1 Score: 69.7 bits (169), Expect = 2.460e-9
Identity = 64/223 (28.70%), Postives = 97/223 (43.50%), Query Frame = 2
Query:  302 HINLFLDTLSSET----LDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSERAVTS 958
            H+  +LD +        ++  A   S  R  K++  L+E + C Y+ QVL+AL H    GI + GDL+  ++LL  G VVKL  F L     + H++A     +AS SS    ++ P    G+                           S  ++ +         A  A S F  +  W APE L G       +++WS+GCL VELL +G  P+ ER + S
Sbjct:   76 HVVKYLDHMQQHDRFFLVEEFAAHGSLLRRLKEDGRLAEDIACRYLYQVLTALYHMAPWGI-VHGDLKASNILLFDGDVVKLTDFALRPRGEDEHEDAERRTTAASTSS----TEVPYLTRGS--------------------------RSGKVAGEED-------AGTALSEFRGSAYWAAPEVLAGTSRATSSSEIWSVGCLAVELL-TGTPPYFERTIHS 259          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: A0A397G414_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G414_9GLOM)

HSP 1 Score: 67.0 bits (162), Expect = 1.650e-8
Identity = 66/287 (23.00%), Postives = 116/287 (40.42%), Query Frame = 2
Query:  110 VGMWRTQHVMLDPQGVTCLLKQMDLVERPRG--------RLLAQCAQRERQSFEAAHHPNVLRLLRFSRVNNHINLFLDTLSSETLDVIARQASSSRSHKDNRG-LSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSE 943
            +GM     V L    +T  L  +  VE P G        + +    QRE    +  HH ++++ L        +N+FL+ +   ++  +           +N G L E+++ S+VRQ+LS L + H + I  R D++G ++L+D  G +K++ FG+++ + ++   AT        SSH                                                            PS+   ++ W APE ++   +   KAD+WSLGCL+VE+  +G  P+ E
Sbjct:  479 IGMGSFGSVYLGLNAITGALMAVKQVELPTGQSSNEERKKSMLDALQREITLLKELHHDHIVQYLGSQHDEKTLNIFLEYVPGGSVSTMI----------NNYGPLEETLVRSFVRQILSGLSYLHDKEIIHR-DIKGANILVDEKGGIKISDFGISKKVEDQFMAAT--------SSHR-----------------------------------------------------------PSL-QGSVFWMAPEVVKQTAYTS-KADIWSLGCLIVEMF-TGDHPFPE 684          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: UPI00092F0C2D (mitogen-activated protein kinase kinase kinase YODA-like n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F0C2D)

HSP 1 Score: 66.2 bits (160), Expect = 2.780e-8
Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  152 GVTCLLKQMDLV-ERPRGRLLAQCAQRERQSFEAAHHPNVLRLLRFSRVNNHINLFLDTLSSETLDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFL 562
            G+ C +K++ L  + P+    A+  ++E        HPN++R      V + + ++L+  +  ++  + +Q            L ES + SY RQ+LS L + H + I  R D++G ++L+DP G VKLA FG+ +++
Sbjct:  375 GLICAMKEVTLCPDDPKSVESAKQLRQEVALLSNLRHPNIVRFYGSEMVGDKLYIYLEYAAGGSIYTLLQQYGQ---------LGESAIRSYTRQILSGLAYLHAKCIVHR-DIKGANILVDPNGTVKLADFGMAKYI 502          
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Match: O42625_NEUCS (MAPKK kinase n=1 Tax=Neurospora crassa TaxID=5141 RepID=O42625_NEUCS)

HSP 1 Score: 66.2 bits (160), Expect = 2.800e-8
Identity = 58/249 (23.29%), Postives = 105/249 (42.17%), Query Frame = 2
Query:  197 RGRLLAQCAQRERQSFEAAHHPNVLRLLRFSRVNNHINLFLDTLSSETLDVIARQASSSRSHKDNRGLSESVLCSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLWERHQEATLPWASASASSHASSSKPPSSALGAAXXXXXXXXXXXXXXXXXXXXXXXTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFDEGKADVWSLGCLMVELLNSGAEPWSE 943
            R + + +  +RE        HPN+++ L  S    ++N+FL+ +   ++  +  Q  +         L ES++ S+VRQ+L  L + H R I  R D++G ++L+D  G +K++ FG+++ L     EAT     A+ + H                                                            PS+   ++ W APE ++   +   KAD+WSLGCL+VE++ +G  P+ +
Sbjct:  435 RKKSMIEALKREITLLRDLQHPNIVQYLGCSSSAEYLNIFLEYVPGGSVQTMLDQYGA---------LPESLVRSFVRQILQGLSYVHNRDIIHR-DIKGANILVDNKGTIKISDFGISKKL-----EATNILNGANNNKHR-----------------------------------------------------------PSL-QGSVFWMAPEVVKQTSYTR-KADIWSLGCLVVEMM-TGTHPFPD 606          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10236.529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836KV71_9TRYP3.150e-1129.69Protein kinase domain-containing protein n=1 Tax=L... [more]
A4HBM5_LEIBR5.670e-1131.52Protein kinase domain-containing protein n=4 Tax=V... [more]
A0A836I6P8_9TRYP7.540e-1129.41Protein kinase domain-containing protein n=1 Tax=P... [more]
Q4QCI8_LEIMA4.350e-1028.05Protein kinase domain-containing protein n=10 Tax=... [more]
A0A640KFN2_LEITA1.840e-929.20Protein kinase, putative n=1 Tax=Leishmania tarent... [more]
A0A1Y1X4C9_9FUNG2.060e-922.11Pkinase-domain-containing protein n=1 Tax=Basidiob... [more]
A0A836I3Q5_9TRYP2.460e-928.70Protein kinase domain-containing protein n=4 Tax=M... [more]
A0A397G414_9GLOM1.650e-823.00Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
UPI00092F0C2D2.780e-828.26mitogen-activated protein kinase kinase kinase YOD... [more]
O42625_NEUCS2.800e-823.29MAPKK kinase n=1 Tax=Neurospora crassa TaxID=5141 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10236contigH-fluviatilis_contig10236:1033..2631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.7
Seed ortholog evalue2.5e-12
Seed eggNOG ortholog5679.XP_010698818.1
KEGG koko:K08269,ko:K20875
KEGG TC1.I.1.1.3
KEGG Pathwayko04136,ko04138,ko04139,ko04140,ko04150,ko04212,map04136,map04138,map04139,map04140,map04150,map04212
EggNOG free text desc.gene split across contig boundaries, should be merged with
EggNOG OGs3XUS8@5653,KOG0198@1,KOG0198@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko03036,ko04131
Hectar predicted targeting categoryother localisation
Exons12
Model size1012
Cds size879
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10236.529.1prot_H-fluviatilis_contig10236.529.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10236 1051..2486 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929061.4817615-UTR-H-fluviatilis_contig10236:1032..10501622929061.4817615-UTR-H-fluviatilis_contig10236:1032..1050Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 1033..1050 -
1691135167.873375-UTR-H-fluviatilis_contig10236:1032..10501691135167.873375-UTR-H-fluviatilis_contig10236:1032..1050Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 1033..1050 -
1622929061.7816088-UTR-H-fluviatilis_contig10236:2486..25271622929061.7816088-UTR-H-fluviatilis_contig10236:2486..2527Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 2487..2527 -
1691135167.997172-UTR-H-fluviatilis_contig10236:2486..25271691135167.997172-UTR-H-fluviatilis_contig10236:2486..2527Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 2487..2527 -
1622929061.7948818-UTR-H-fluviatilis_contig10236:2557..26311622929061.7948818-UTR-H-fluviatilis_contig10236:2557..2631Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 2558..2631 -
1691135168.0052457-UTR-H-fluviatilis_contig10236:2557..26311691135168.0052457-UTR-H-fluviatilis_contig10236:2557..2631Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10236 2558..2631 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929061.556115-CDS-H-fluviatilis_contig10236:1050..11741622929061.556115-CDS-H-fluviatilis_contig10236:1050..1174Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1051..1174 -
1691135167.883474-CDS-H-fluviatilis_contig10236:1050..11741691135167.883474-CDS-H-fluviatilis_contig10236:1050..1174Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1051..1174 -
1622929061.5987165-CDS-H-fluviatilis_contig10236:1240..13311622929061.5987165-CDS-H-fluviatilis_contig10236:1240..1331Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1241..1331 -
1691135167.8917959-CDS-H-fluviatilis_contig10236:1240..13311691135167.8917959-CDS-H-fluviatilis_contig10236:1240..1331Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1241..1331 -
1622929061.6171598-CDS-H-fluviatilis_contig10236:1420..15231622929061.6171598-CDS-H-fluviatilis_contig10236:1420..1523Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1421..1523 -
1691135167.9002168-CDS-H-fluviatilis_contig10236:1420..15231691135167.9002168-CDS-H-fluviatilis_contig10236:1420..1523Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1421..1523 -
1622929061.6321912-CDS-H-fluviatilis_contig10236:1555..16381622929061.6321912-CDS-H-fluviatilis_contig10236:1555..1638Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1556..1638 -
1691135167.9124494-CDS-H-fluviatilis_contig10236:1555..16381691135167.9124494-CDS-H-fluviatilis_contig10236:1555..1638Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1556..1638 -
1622929061.6463063-CDS-H-fluviatilis_contig10236:1705..18131622929061.6463063-CDS-H-fluviatilis_contig10236:1705..1813Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1706..1813 -
1691135167.9251132-CDS-H-fluviatilis_contig10236:1705..18131691135167.9251132-CDS-H-fluviatilis_contig10236:1705..1813Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1706..1813 -
1622929061.66508-CDS-H-fluviatilis_contig10236:1895..20021622929061.66508-CDS-H-fluviatilis_contig10236:1895..2002Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1896..2002 -
1691135167.9324667-CDS-H-fluviatilis_contig10236:1895..20021691135167.9324667-CDS-H-fluviatilis_contig10236:1895..2002Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 1896..2002 -
1622929061.682829-CDS-H-fluviatilis_contig10236:2047..20921622929061.682829-CDS-H-fluviatilis_contig10236:2047..2092Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2048..2092 -
1691135167.9403405-CDS-H-fluviatilis_contig10236:2047..20921691135167.9403405-CDS-H-fluviatilis_contig10236:2047..2092Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2048..2092 -
1622929061.7016616-CDS-H-fluviatilis_contig10236:2144..21861622929061.7016616-CDS-H-fluviatilis_contig10236:2144..2186Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2145..2186 -
1691135167.9590435-CDS-H-fluviatilis_contig10236:2144..21861691135167.9590435-CDS-H-fluviatilis_contig10236:2144..2186Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2145..2186 -
1622929061.7242067-CDS-H-fluviatilis_contig10236:2215..22951622929061.7242067-CDS-H-fluviatilis_contig10236:2215..2295Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2216..2295 -
1691135167.9690993-CDS-H-fluviatilis_contig10236:2215..22951691135167.9690993-CDS-H-fluviatilis_contig10236:2215..2295Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2216..2295 -
1622929061.744469-CDS-H-fluviatilis_contig10236:2343..24021622929061.744469-CDS-H-fluviatilis_contig10236:2343..2402Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2344..2402 -
1691135167.9794388-CDS-H-fluviatilis_contig10236:2343..24021691135167.9794388-CDS-H-fluviatilis_contig10236:2343..2402Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2344..2402 -
1622929061.7609653-CDS-H-fluviatilis_contig10236:2449..24861622929061.7609653-CDS-H-fluviatilis_contig10236:2449..2486Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2450..2486 -
1691135167.9884183-CDS-H-fluviatilis_contig10236:2449..24861691135167.9884183-CDS-H-fluviatilis_contig10236:2449..2486Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10236 2450..2486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10236.529.1

>prot_H-fluviatilis_contig10236.529.1 ID=prot_H-fluviatilis_contig10236.529.1|Name=mRNA_H-fluviatilis_contig10236.529.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=293bp
MWRTQHVMLDPQGVTCLLKQMDLVERPRGRLLAQCAQRERQSFEAAHHPN
VLRLLRFSRVNNHINLFLDTLSSETLDVIARQASSSRSHKDNRGLSESVL
CSYVRQVLSALLHCHKRGIFMRGDLRGRSVLLDPGGVVKLAGFGLNRFLW
ERHQEATLPWASASASSHASSSKPPSSALGAASAASADSSSSAKSGRASR
ASVSSTESSADISPQPSFASTGPSAHAAPSVFDSAMLWCAPETLRGGPFD
EGKADVWSLGCLMVELLNSGAEPWSERAVTSVGELRRIVGNA*
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mRNA from alignment at H-fluviatilis_contig10236:1033..2631-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10236.529.1 ID=mRNA_H-fluviatilis_contig10236.529.1|Name=mRNA_H-fluviatilis_contig10236.529.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1599bp|location=Sequence derived from alignment at H-fluviatilis_contig10236:1033..2631- (Heribaudiella fluviatilis SAG_13_90)
GCCTGAGCGCAAACTGGATTCGGACAAGTACAGCGTCGTTCGCAACGTGG ACGCTGGTTGCTACGATTCAATTGGCAGTCCATGCAAGTTTTACGTTGTT GTAGTGCTTCGATCGGTATATTTTTGTACCTTGTGTGCAGTGGGCATGTG GCGCACCCAGCACGTGATGTTGGACCCGCAAGGTTGTTGCATCCATAGTA CTCAAACGACTGGCTCCTGGGTCGATCAGGTGTGACGTGTCTGCTGAAAC AGATGGACTTGGTGGAGAGACCGCGCGGTCGGCTGTTGGTGAGCTGCTCC TCCATGACACACATGTATTCATGTAATGTTGTGCAGGCCCAATGTGCACA GCGTGAAAGACAGAGTTTCGAAGCTGCGCACCATCCCAATGTGTTGCGAT TGTTGAGATTCAGTCGGTTTATCGTATTCGTTTACTGCTCGTCAGAGTCA ACAACCACATCAATCTCTTCTTGGACACCCTGTCCAGGTACCAACACGGT CACGCCCAAGCCTAACGTGTGTGTTTGTTCCTATTGCAGTGAGACGCTCG ATGTTATTGCTCGACAGGCATCATCATCGCGCAGGTTCATTCTGAAATCC GTTGTTCAAATCATGCCATTGTTCTGCAGTCACAAGGACAACCGTGGCCT GAGTGAATCGGTTCTTTGTTCATACGTGCGGCAAGTGCTCAGTGCCTTGT TGCATTGCCACAAGCGGGGCATTTTCATGCGTGGAGGTGATCTTCACGCT CTTCTCGGACTTTTCGCGTGTCACGCAATGGTGGTGACACGCAATGGTGG TTGTGATATCGGATGTAGATTTGCGTGGCCGGAGCGTGCTGTTGGACCCG GGGGGTGTGGTGAAACTCGCAGGGTTTGGCCTGAACCGGTTCCTGTGGGA GCGTCACCAGGAGGCAACACTGCCATGTATGGCTTTCCTTCGGTGCATGC GGCCCGCCTCACTCAGCGGCGCTTGCCTGTGTGGCTGTGACAGGGGCGAG TGCGTCTGCTAGCTCGCACGCCTCCTCGTCCAAGCCGCCGTCGTCGGCGT TGGGTGCTGCTTCGGCTGCATCGGCGGTTTCGTCGAGTTGTTACTGATGC CACTCCAGGACAGCAGCAGCAGCGCAAAGAGCGGCAGGGCATCGCGTGCG TCCGTGTCTTCCACCGAATCCTCCGCGGACATCTCGCCGCAGCCCTCATT CGCCTCGACGGGTGCGACAGAGAAGAGTAGTGTCGATGAAGGCGCGGGGG AGTGGATCGAGGACACGCCTCCCCCCCTCCCCCCACTCACACCGACGCAG GGCCCAGTGCGCATGCGGCGCCGTCGGTGTTCGATTCGGCCATGCTGTGG TGCGCGCCCGAAACACTTCGCGGTGGACCGTTTGATGAAGGGTATGTTAC TTTCGTTTGGCTTCTTTCGACGTGGACGGTTGTATGTCTGTGCTGGTGCG CGTGCAGGAAAGCCGACGTGTGGTCCCTGGGCTGTTTGATGGTGGAATTG CTCAACAGTGGCGCCGAGCCGTGGTCGGAACGTGCAGTGACCAGCGTGGG CGAGTTGCGGCGCATCGTCGGTAACGCTTGAGCCTTGCTGAACTGGGTG
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10236:1033..2631-

>mRNA_H-fluviatilis_contig10236.529.1 ID=mRNA_H-fluviatilis_contig10236.529.1|Name=mRNA_H-fluviatilis_contig10236.529.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1758bp|location=Sequence derived from alignment at H-fluviatilis_contig10236:1033..2631- (Heribaudiella fluviatilis SAG_13_90)
ATGTGGCGCACCCAGCACGTGATGTTGGACCCGCAAGATGTGGCGCACCC
AGCACGTGATGTTGGACCCGCAAGGTGTGACGTGTCTGCTGAAACAGATG
GACTTGGTGGAGAGACCGCGCGGTCGGCTGTTGGTGTGACGTGTCTGCTG
AAACAGATGGACTTGGTGGAGAGACCGCGCGGTCGGCTGTTGGCCCAATG
TGCACAGCGTGAAAGACAGAGTTTCGAAGCTGCGCACCATCCCAATGTGT
TGCGATTGTTGAGATTCAGTCGGCCCAATGTGCACAGCGTGAAAGACAGA
GTTTCGAAGCTGCGCACCATCCCAATGTGTTGCGATTGTTGAGATTCAGT
CGAGTCAACAACCACATCAATCTCTTCTTGGACACCCTGTCCAGAGTCAA
CAACCACATCAATCTCTTCTTGGACACCCTGTCCAGTGAGACGCTCGATG
TTATTGCTCGACAGGCATCATCATCGCGCAGTGAGACGCTCGATGTTATT
GCTCGACAGGCATCATCATCGCGCAGTCACAAGGACAACCGTGGCCTGAG
TGAATCGGTTCTTTGTTCATACGTGCGGCAAGTGCTCAGTGCCTTGTTGC
ATTGCCACAAGCGGGGCATTTTCATGCGTGGAGTCACAAGGACAACCGTG
GCCTGAGTGAATCGGTTCTTTGTTCATACGTGCGGCAAGTGCTCAGTGCC
TTGTTGCATTGCCACAAGCGGGGCATTTTCATGCGTGGAGATTTGCGTGG
CCGGAGCGTGCTGTTGGACCCGGGGGGTGTGGTGAAACTCGCAGGGTTTG
GCCTGAACCGGTTCCTGTGGGAGCGTCACCAGGAGGCAACACTGCCATAT
TTGCGTGGCCGGAGCGTGCTGTTGGACCCGGGGGGTGTGGTGAAACTCGC
AGGGTTTGGCCTGAACCGGTTCCTGTGGGAGCGTCACCAGGAGGCAACAC
TGCCATGGGCGAGTGCGTCTGCTAGCTCGCACGCCTCCTCGTCCAAGCCG
CCGTCGTCGGCGTTGGGTGCTGCTTCGGCTGCATCGGCGGGGCGAGTGCG
TCTGCTAGCTCGCACGCCTCCTCGTCCAAGCCGCCGTCGTCGGCGTTGGG
TGCTGCTTCGGCTGCATCGGCGGACAGCAGCAGCAGCGCAAAGAGCGGCA
GGGCATCGCGTGCGTCCGTGTCTTCCACCGAATCCTCCGCGGACATCTCG
CCGCAGCCCTCATTCGCCTCGACGGGACAGCAGCAGCAGCGCAAAGAGCG
GCAGGGCATCGCGTGCGTCCGTGTCTTCCACCGAATCCTCCGCGGACATC
TCGCCGCAGCCCTCATTCGCCTCGACGGGGCCCAGTGCGCATGCGGCGCC
GTCGGTGTTCGATTCGGCCATGCTGTGGTGCGCGCCCGAAACACTTCGCG
GTGGACCGTTTGATGAAGGGGCCCAGTGCGCATGCGGCGCCGTCGGTGTT
CGATTCGGCCATGCTGTGGTGCGCGCCCGAAACACTTCGCGGTGGACCGT
TTGATGAAGGGAAAGCCGACGTGTGGTCCCTGGGCTGTTTGATGGTGGAA
TTGCTCAACAGTGGCGCCGAGCCGTGGTCGGAACGTGCAGTGACCAGCGT
GGGCGAGTTGCGGCGCATCGTCGGTAACGCTTGAGAAAGCCGACGTGTGG
TCCCTGGGCTGTTTGATGGTGGAATTGCTCAACAGTGGCGCCGAGCCGTG
GTCGGAACGTGCAGTGACCAGCGTGGGCGAGTTGCGGCGCATCGTCGGTA
ACGCTTGA
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