mRNA_H-fluviatilis_contig10233.527.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10233.527.1
Unique NamemRNA_H-fluviatilis_contig10233.527.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 3.860e-126
Identity = 180/236 (76.27%), Postives = 207/236 (87.71%), Query Frame = 1
Query:    1 ELFRKRDLERAQRPYGAHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPLESLVMGAVSKIMSSLVTYPSQVI 708
            E+F KR+  + +R YGA+HLIAGT+AG+VTTAALYPLDL+KTRYQVYDKGPSPY S+G+AFR I+REEGARALYQGLGPAL+GNAVAWGGFFYCYEKIK  +R R    A+LG++HHLGAGY AGA+MVLATNPVWMIKTRMQLQ+  A  G VRPY+GL DAVRTI R+EG LALYKGAVPALMLCGQGAVQF  YEWLKARVPK++ENTP ESL+MG  SKI+S+LVTYP+Q +
Sbjct:   27 EMFSKRE-SKGKRHYGANHLIAGTTAGVVTTAALYPLDLVKTRYQVYDKGPSPYKSLGTAFRTIIREEGARALYQGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.940e-91
Identity = 161/285 (56.49%), Postives = 200/285 (70.18%), Query Frame = 1
Query:   55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAE-LGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQ---NSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ-SENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTE--EEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            HLIAGT+AGLV+T A YPLDL+KTRYQ Y +G SPY S+ SAF+ I  +EG RALY GL P++ G  +AWG +FY Y+  K  L+  + +GAE L   HHL     AG I+VL  NPVW++KTR+QLQ   N+   G   RPY G +DA+ TIAR+EGALALYKG VPA++L  QGA+QF AYEWLK  VP+   ++ P+ESLVMG  SKI +S+VTYP+QVIK+RLQ R          G S Y G   CA  I ++EG RGFF+G V YA+RAAPASA+TFVV
Sbjct:   51 HLIAGTAAGLVSTTAFYPLDLVKTRYQAYHQGASPYASLSSAFKTIAEQEGWRALYAGLVPSVWGGGLAWGAYFYLYQMSKDALQ--TGTGAEQLNVSHHL----TAGNILVLLGNPVWLVKTRLQLQTRDNTQRLGR--RPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVV 327          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA)

HSP 1 Score: 261 bits (668), Expect = 4.290e-84
Identity = 137/226 (60.62%), Postives = 168/226 (74.34%), Query Frame = 1
Query:   52 HHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQN------SAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ-SENTPLESLVMGAVSKIMSSLVTYPSQVI 708
            HHLIAGT AG+ +T ALYPLDLIKT YQ YDKG SPY S+G+AF  IV++ G   LY GLGPA++G+ V+WGG+FY YE  K  +R R     +LG +HHL AG AAG  +VL TNP+W++KTRMQLQ       +AA G   RPY GLSDAV TI R+EGALALYKG VPAL+L GQGA+QF AYEWLKARVP+  ++N P ESL+MGA SK+ +SLV  P+ ++
Sbjct:    1 HHLIAGTVAGVTSTTALYPLDLIKTHYQAYDKGKSPYRSLGAAFTTIVKQNGWSGLYSGLGPAVLGSGVSWGGYFYLYEWAKTSMR-RFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGR--RPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTPNMLL 223          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.150e-69
Identity = 136/302 (45.03%), Postives = 187/302 (61.92%), Query Frame = 1
Query:   55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQ--------------------NSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPLESL-VMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYR--GVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            HL+AG  AG V++A L PLDLIK   QVYD+   P+ S+    ++IV++EG R LY+GL PAL+ N ++WGG+FY YE  K RYLR       ++ S+HHL + + AG IMV  TNP+W+IKTRMQLQ                    ++A++ G    Y G++ A+RTI R+EG L LYKG +PAL+L   GA+QF  YEWLK  V  +    P+ S  V+G ++KI++ LVTYP QV+K+RLQQR T      G SR+R      C   I + EG+ GFFKG +   ++ AP++ ITF+V
Sbjct:   78 HLVAGLVAGAVSSALLLPLDLIKVHLQVYDRAGRPFPSMYKGMQSIVQQEGYRGLYKGLTPALLANGLSWGGYFYFYEHAKNRYLRQHR----QITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVV--EPYQAPVFSFSVLGGMAKILAGLVTYPPQVVKARLQQRDT------GASRWRYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLV 367          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS)

HSP 1 Score: 218 bits (555), Expect = 2.250e-66
Identity = 133/291 (45.70%), Postives = 173/291 (59.45%), Query Frame = 1
Query:   61 IAGTSAGLVTTAALYPLDLIKTRYQVYDKGP-SPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAA-------NGGSVRP-YAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKA------RVPKQSENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            +AG + G  +T  LYPLDL+K R QV ++ P +   +  +A + ++R EG   LY+GL PA+IG+A +WGGFF  YE++K+ +  R    A       L     +GA MV  TNP+W+IKTR+QLQNS         NG  ++P Y GL  A  TI ++EG LALYKG+VPALML   G +QF +YEWLK       R   +        LVMGA SK ++S  TYP QVIK+RLQQR   E        Y GV+ C   I + EGV GFFKG V  A+R AP++AITFVV
Sbjct:    1 LAGIAGGSASTILLYPLDLVKVRLQVDERRPKTQQHAPPAAAKRVIRTEGYAGLYKGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIKFANAA----LDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKPPYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWNRTIGERLRASFGYLVMGATSKFIASTTTYPLQVIKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVV 279          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A485KGD8_9STRA (Aste57867_4021 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGD8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.610e-66
Identity = 123/288 (42.71%), Postives = 169/288 (58.68%), Query Frame = 1
Query:   55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGA--------RALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPL--ESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            H +AG +AG  +TA LYPLDL+KTRYQV++  P P+ S+  AF +IVR +GA        R LY+G+ PAL G  ++WG +F  YE  K +        A +G   H  AG  AGA+ V  TNP+W++K RMQ+Q   A   +  PY  +++A++ I  +EGALALYKG VPAL+L   GA +F AYEWLK        +T     SL MGA+++  +S  TYP QVIK+RLQQ G   +      +Y+G   C   I Q EG+RG++KG     ++  P  A+ F V
Sbjct:   14 HCVAGVAAGGFSTAVLYPLDLVKTRYQVHENSPKPFRSLAHAFASIVRTDGAAPTRRYHVRGLYEGMSPALYGTTISWGLYFLFYEHAKSFYEQHPAIPASVG---HFAAGIQAGAMCVPLTNPIWLVKVRMQVQ---ATHATAVPYTSMTNALQRIVAEEGALALYKGVVPALLLTTHGAFKFVAYEWLKKEYQTNVGSTLSIPHSLAMGALAQAFASTATYPYQVIKTRLQQGGIWAD------KYKGTWDCTKQIYQHEGMRGYYKGLTPNLIKVLPTGALIFAV 289          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: UPI001CB8D61A (folate transporter 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D61A)

HSP 1 Score: 213 bits (542), Expect = 5.090e-64
Identity = 128/293 (43.69%), Postives = 174/293 (59.39%), Query Frame = 1
Query:   61 IAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSP----YGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKA------RVPKQSENTPLESLV------MGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            +AG+ AGL T    +PLD+++TR+QVYD G +P    Y +   A   I R EG R LY G  PA++G+ ++WG +FY Y   K RY++ R K+GA +    HL +   AG ++ L TNP+W++KTR+QLQ          PYAG SDA++TI RDEG  ALYKG +P L L   GA+QFTAYE L+        +P  S     +SL       +GA SK+ + L TYP QVI+SRLQQR +      GV RY    H  T  AQ EG +GF++G  A  ++  PA++ITF+V
Sbjct:   25 VAGSIAGLATVTFTHPLDVVRTRFQVYD-GRNPNLPCYRNTPHALFTIARSEGLRGLYAGFNPAVLGSTISWGLYFYFYNNAKQRYMKSRDKTGARI----HLASAAEAGGLVCLFTNPIWVVKTRLQLQTPQLQAP---PYAGFSDALKTILRDEGWRALYKGLLPGLFLVTHGAIQFTAYEELRKIIVEFKGIPNSSNAKNSDSLTTFDYAALGATSKLAAILATYPFQVIRSRLQQRPSVN----GVPRYLDSRHALTKTAQLEGTKGFYRGITANLLKNLPAASITFIV 305          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A5D6XH46_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH46_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.240e-64
Identity = 125/287 (43.55%), Postives = 164/287 (57.14%), Query Frame = 1
Query:   64 AGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQN-------SAANGGSVR-----PYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ--SENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITF 882
            AG  AG ++TA LYPLDL+K RYQV+DK    Y S+G  FR IV EEG RAL++G+ PAL G+A++WG +   Y+  K      + SG   GS  +  +   AG I V  TNP+W++K RMQ+Q+       SA    + +     PY  ++DA R I  +EG LALYKG +PAL L   GA +F AYE +KA   K    E   + +L MGA+S+  +S  TYP QVIK+RLQQ G          +Y G   CAT I + EG RG FKG V   ++  P  AI F
Sbjct:   23 AGLGAGAISTALLYPLDLVKVRYQVHDKSARRYQSLGHGFRTIVAEEGTRALFRGMSPALYGSALSWGLYMLFYQNAKERYARLADSGIIQGSWQYFFSALEAGIICVPITNPIWLVKVRMQVQSNVQLKTMSAGKDAAAKLAKHVPYKSMTDAFRRIVAEEGPLALYKGVIPALFLTTHGAFKFVAYETVKAAYQKHWGPEMDVIPTLAMGAISQAFASTATYPYQVIKARLQQGGDS------ALQYSGTWDCATKIVRHEGYRGLFKGLVPNLLKVIPTGAIVF 303          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A6G0WPA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPA9_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.060e-63
Identity = 124/290 (42.76%), Postives = 173/290 (59.66%), Query Frame = 1
Query:   49 AHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGA-------RALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPL---ESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            A HL+AG +AG ++TA LYPLDL+KTRYQ+++  P  Y S+  AF +IVR+EG        RALYQG+ PAL G  ++WG +F  YE  K +   ++   A +G   H  +G  AGA+ V  TNP+W++K RMQ+Q   A   +  PY  +S+A++ IA +EG LALYKG +PAL L   GA +F AYE LK     +    PL    +L +GA+++  +S  TYP QVIK+RLQQ G   +      +Y G   C   I Q+EG+RGF+KG     ++  P  A+ F V
Sbjct:    9 AKHLVAGVAAGGISTAILYPLDLVKTRYQIHESSPKAYRSLLQAFTSIVRQEGGSSSRWNVRALYQGMSPALYGTTLSWGLYFLFYEHAKSFYAEQTTLPAWVG---HFASGIQAGAMCVPLTNPIWLVKIRMQVQ---ATHATQVPYTSVSNALKRIAAEEGILALYKGMIPALFLTTHGAFKFVAYEALKTEY-NELVGKPLMFPHTLTVGALAQAFASTATYPYQVIKTRLQQGGPLAD------KYHGTWDCTKRIFQQEGIRGFYKGLTPNLIKVLPTGALIFAV 285          
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: UPI000CED13D0 (folate transporter 1, chloroplastic n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED13D0)

HSP 1 Score: 211 bits (537), Expect = 2.270e-63
Identity = 128/293 (43.69%), Postives = 178/293 (60.75%), Query Frame = 1
Query:   64 AGTSAGLVTTAALYPLDLIKTRYQVYDKGPS---PYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALML-CGQGAVQFTAYEWL----------KARVPKQSENTPLESL---VMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
            AG  AG  T AA++PLD+++TR+QV D   S    Y +  +A   I R EG R LY G  PA++G+ V+WG +F+ Y++ K RY R R++   +L   HHL +   AGA++ L TNP+W++KTR+QLQN        RPY+G  DA+RTI R+EG +ALY+G VP L L    GA+QFTAYE L          K      S +TPL S     +GA SKI++ L++YP QVI++RLQQR   E    GV RY   +H     A+ EG+RGF++G     ++  PA++ITF+V
Sbjct:   15 AGAVAGFATVAAMHPLDVVRTRFQVNDGRVSNIPTYKNTANAIFTIARSEGLRGLYAGFSPAVLGSTVSWGLYFFFYDRAKQRYSRNRAE---KLSPGHHLASAAEAGALVCLCTNPIWLVKTRLQLQNPLHQ---TRPYSGFYDALRTIMREEGWIALYRGIVPGLFLQVSHGAIQFTAYEELRKVLIDLKSGKNTEKSGSSDTPLNSFDYAALGASSKIVAMLLSYPFQVIRARLQQRPCNE----GVPRYMDSLHVVKDTARFEGLRGFYRGITPNLLKNVPAASITFIV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB8_ECTSI3.860e-12676.27Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YH58_9STRA5.940e-9156.49Mitochondrial carrier domain-containing protein n=... [more]
A0A836CHG8_9STRA4.290e-8460.62Folate transporter (Fragment) n=1 Tax=Tribonema mi... [more]
W7T4J3_9STRA1.150e-6945.03Mitochondrial folate transporter carrier-like prot... [more]
B5YLY4_THAPS2.250e-6645.70Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A485KGD8_9STRA8.610e-6642.71Aste57867_4021 protein n=1 Tax=Aphanomyces stellat... [more]
UPI001CB8D61A5.090e-6443.69folate transporter 1, chloroplastic-like n=1 Tax=E... [more]
A0A5D6XH46_9STRA5.240e-6443.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WPA9_9STRA1.060e-6342.76Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI000CED13D02.270e-6343.69folate transporter 1, chloroplastic n=1 Tax=Morus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10233contigH-fluviatilis_contig10233:2..5019 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.7
Seed ortholog evalue3.2e-100
Seed eggNOG ortholog2880.D7FQB8
Preferred nameSLC25A32
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
EggNOG free text desc.Belongs to the mitochondrial carrier (TC 2.A.29) family
EggNOG OGsKOG0764@1,KOG0764@2759
EC1.4.3.21
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Hectar predicted targeting categoryother localisation
Exons7
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929061.2482388-CDS-H-fluviatilis_contig10233:1..1871622929061.2482388-CDS-H-fluviatilis_contig10233:1..187Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 2..187 -
1691135167.764524-CDS-H-fluviatilis_contig10233:1..1871691135167.764524-CDS-H-fluviatilis_contig10233:1..187Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 2..187 -
1622929061.269041-CDS-H-fluviatilis_contig10233:574..6461622929061.269041-CDS-H-fluviatilis_contig10233:574..646Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 575..646 -
1691135167.7748663-CDS-H-fluviatilis_contig10233:574..6461691135167.7748663-CDS-H-fluviatilis_contig10233:574..646Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 575..646 -
1622929061.2863383-CDS-H-fluviatilis_contig10233:1037..11831622929061.2863383-CDS-H-fluviatilis_contig10233:1037..1183Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 1038..1183 -
1691135167.7822444-CDS-H-fluviatilis_contig10233:1037..11831691135167.7822444-CDS-H-fluviatilis_contig10233:1037..1183Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 1038..1183 -
1622929061.30416-CDS-H-fluviatilis_contig10233:1677..18641622929061.30416-CDS-H-fluviatilis_contig10233:1677..1864Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 1678..1864 -
1691135167.789642-CDS-H-fluviatilis_contig10233:1677..18641691135167.789642-CDS-H-fluviatilis_contig10233:1677..1864Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 1678..1864 -
1622929061.321779-CDS-H-fluviatilis_contig10233:2297..23691622929061.321779-CDS-H-fluviatilis_contig10233:2297..2369Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 2298..2369 -
1691135167.8029418-CDS-H-fluviatilis_contig10233:2297..23691691135167.8029418-CDS-H-fluviatilis_contig10233:2297..2369Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 2298..2369 -
1622929061.3450484-CDS-H-fluviatilis_contig10233:3317..34071622929061.3450484-CDS-H-fluviatilis_contig10233:3317..3407Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 3318..3407 -
1691135167.8112597-CDS-H-fluviatilis_contig10233:3317..34071691135167.8112597-CDS-H-fluviatilis_contig10233:3317..3407Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 3318..3407 -
1622929061.3636525-CDS-H-fluviatilis_contig10233:4884..50191622929061.3636525-CDS-H-fluviatilis_contig10233:4884..5019Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 4885..5019 -
1691135167.8200126-CDS-H-fluviatilis_contig10233:4884..50191691135167.8200126-CDS-H-fluviatilis_contig10233:4884..5019Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10233 4885..5019 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10233.527.1prot_H-fluviatilis_contig10233.527.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10233 2..5019 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10233.527.1

>prot_H-fluviatilis_contig10233.527.1 ID=prot_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=296bp
ELFRKRDLERAQRPYGAHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKG
PSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKR
YLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAAN
GGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWL
KARVPKQSENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIR
TGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV
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mRNA from alignment at H-fluviatilis_contig10233:2..5019-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10233.527.1 ID=mRNA_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5018bp|location=Sequence derived from alignment at H-fluviatilis_contig10233:2..5019- (Heribaudiella fluviatilis SAG_13_90)
GAGCTGTTCCGGAAGCGCGACCTCGAACGCGCGCAGCGCCCGTACGGAGC TCATCATCTCATCGCGGGAACGTCAGCGGGGCTTGTGACGACCGCGGCGC TGTACCCGTTGGACCTCATCAAAACTCGATATCAGGTAAGATGAGATTTC GCGAAGATGGTAGTTACAGCTCTGTCGCAGCCGAGTGGGCGTCGTCTGAT TTGGTGTGCTGAAAATTTTCTACAAATTGAAGAAGCACCTCAGTTGAGGA GAGTCAGCAAGCGAGAATTACACTTGAGAGCAAGTGTCCTGTTATACGCA GAGCTGTTGTGGATCTTGTGTCTAGTTCTTCGTTCTGCCTCGCGTCAGTT GCACTTGCAATTCTCGAGTGGTGCCGGGGGCAGCCAAATCTCGATCGAAG CACACCTTGTTTGATACCAAGCGGGTCACGCTGTTGTGTTGAGTCGCTGC GAATCTGTAACAGCACGACTATGTTCAGCTTCAAGCATTTGTAGCGACTT TTCCAAACCCCTCTTCAAATCTCTCAAGATAGACATGAAAACTGTCGGTG TCGGGAGTGGCGCCGGCCCTCAGCTTTCCTCGCAGTGGTTCGGGTTTCGC GGGTCATGGGCGTAAGTGTGCGAAGGTCAGATCGTCGGCAGATGCTCTTT GGTGGATCCACAATGATAGTAAGCTCGGATTTCGATTCATCTACTCTTAC ACGTGGAACATGCACATCCGTGTGCCGTTCCGCACACACGCACGCACTTT GCGATATGATACAACTCGGAAGAAGCGGACTCTCTTAGTTCAGTCTGTAC CGAGGAACGTCCCACTATGGCCAAGCGAAGGACGAGTAACTCATGGCGAG TGCATTCAGGGATCGCACAGGTTGGAAATCTTGCACCGAAACCTTACACC GAACAATCGAGGAACCGACGGTGAGCTTGCAACACGGCGCACTTAAAATT GAGCCTGTTAAGAGAGCTCGGCTAACTTATTTCACTGGCTCTGTACAAAC TTTCCTACCCCTGCGTATTACTTTCCATGAGATCGTTGTGTGGAGGAAAG TAACGGCAAATCCCATACAGACTTGGACACGAAAGCGAACGGAGCGAAAG AATCGCCACAAAATAGGAAACACGACCGAGGCGGGAACGTGCCGAACCGC ACGTCCAAGGACGCCCACGTTGAAGGCCGTGGCTTTGTGACTAGTCATGT GCGTCTTTCGTGGCACCCGCCGGCGCAGCTATCTCGTGTGGACGCTCGCG CGTCTCTCTAGGACACAAAATTAGAGCATGTCAAAAGAAACTATGTACGG ATGTCGCCACGAAAAAGCAATCAGCCCTCCGCACGACTGCTCATATCGCA CCACCTGCCCCCTGATTTTTTTTTCTGACCAAGGTCTTGGATTCTCTGGG TTTTCGGGCTACGAGCTGGAGGAGCCGGGCAAAAAAGGACGCGTGACAGT TGACGAACTATGGAAAACGTAGTCTTTCGCCCCCTCTATGCCTCGTGTTT GTGTGGCTGCACCTCGCTCGTGCGCTCTACCAGCCCATTTATTCCGCTTC TTGATCACCCACCCTTCCCCCAAACACCAAATCTGGTCGTCTCGTGCCTG TCTACTCATCAGGTCTACGACAAGGGACCGTCCCCGTACGGGTCTGTGGG ATCGGCGTTTCGAGCGATCGTGCGGGAAGAAGGAGCAAGAGCGCTCTATC AGGTACGGTCGGTACCCTCGTGAAGTCGTTCACCACATTTACGTTTTGAC TCGTGGCTAACGCAAGTGGTAAGCAGTCGCAACTTTCACGTGGGTTAATT CACCCCCTTCCCCCAAAGCGTGGGAGGACACACCGAATGTTGGCAGAGAG AAGGCCACCATTTGGCCGGAAATATTGATCGCGCGGGGCCACGGGAGAAT ACCGCACCCTGTGACTGCAACTGCAGCGCGCGCCTTCAATGATCCCCATG ACTTGCGAGAGAAGACTTTGCGTGGTGAAGTATTCATCTTCCGTCGAATC GAGTTCTTAGTTCACCCGATGTACAGTCAGTGAACGAACGCAGAGTACCG CGGTAAGATGGGCCCAATCTTACGATAGCAGTGGTGGCTTGACAAACGCA GTATCCGCTGCGATCACAGCTCCTCCTAGCCATGAGGTCTCGCGTACAGC ATCGCACCTGGAATATCGCTCTCTGTGATGATTTTTTGGCCCTTTGATGG CACTCAACGGGGTGAGCCATCCGCTCTTCACTTTCCGGTCCGCTCAGGAA GTAGCGGACGCGACATCTCCGAATCGAATAGTTGAAGTTTGGGCAATGAA AATGGATGTAATGAGCGACTTTGTCGGCTTGGTTTCGAAATCCTGATCGC ATCAGACGTCCAAACGGAAGAATGTTCAAGGTGCTTCTTTTCTTTTACGT GTCAATCGCGGTAGCAGTCAACCACTTCAGCAGTTTGTACTCATCCTTGT ATTTTGAAGCACGGAGCGATGCAAGTGCAACGCTACACGGTAGCTTCCGT AGCGATCCAGCACGGTGTCTCTTTCTGTGGGTCGATTTTGAGTTCGTGGT GCTACCCAGGTCTGGCGTTTTTCAACAACTGGTATGCTTAACCTCGGTTT GACCTTGGTCCTTTCTTCTCGATCACGGTGCGTTGATTGCTTGAGCTCAG GGTCTAGGCCCAGCGCTAATTGGGAACGCGGTGGCGTGGGGAGGGTTCTT CTACTGCTACGAGAAAATCAAGGTTTGTACTCAGCCAGGCTGGACAAGGC GGTACATGCCAACAATAGCAGCTTATTCGCGCGGTCTCGCCGATGCCGAA TGTTGGCAAGTATACTCATGTGGCGACCACCTTCTCACGGCCACAACCGA CACGGTGCTGACTTCATTCAGGCTTGAAGGTCAATCAAGTCGACGGGCCT TGTGCGGCGGAGCTACTCCACGGAAACCTCCAAGGATAGCCCACTACTGT TTTGAGAAAGCACATTCGGTCTGTGAGATATGTTCAGTCTCGACGGTGTC CTAGAGCGGCTCTCCCTTCGGGGGACGTATGTTTGCGTTTCGCGAGGACG CGCATCATTTTTGTACAGATGTAGCGCTTCAAAATAGCATGCTCACGTGG TGGAAAGAACATATCGCGTTGCTAACCCAGAAACGCGATGTCCCTCTGCT CGCAGCGATATTTACGCGGCAGGTCGAAAAGCGGCGCTGAATTAGGCTCG TTGCATCACCTCGGGGCTGGCTATGCAGCGGGAGCGATCATGGTGCTCGC TACCAACCCCGTATGGATGATCAAGACCCGGATGCAGCTGCAGAACAGTG CAGCGAATGGGGGTTCTGTGCGACCTTACGCTGGACTGTCCGGTACGTGT CTATCGCGAATTTGTTGGCTTGTCGATGCCATTGCTGGACAGGTCTGAGA TGGGGGAGCTTCTGCCTTAGTCGTGAGCCCGTCCTTCGATTCCCGGTGCG CCTGCGACTCGCCTTAGAATCGTTTCTATTCCCGCTGAGGCTGTTTATGA TGAGTGCTGATTAGGAGCGGGCGGCACACAATCACAATCTCAGGATTCGC TCTCCTGAGACACACGAAGTTCCCATGACGACCATTGCGGATTTGCACTG CTGACCGTATCCAGACGAATTCGTACTTTGAACGTGCCTGCGATGATGTC ATCAATGGGTTTACCAGGATTATTGCCACGTTATCACGTTTCTTTTGCCG AATCGCGGAGCTTGAGTTCATACATAATGAAAAAATTGGAACGTGTCAGG CTGAGTACGTCGGTCATCTCATCTGACGAGAAAGTTATTCAATGTGTGCA TTTTTGCCTGGGCGGTCCCGTTTACGCGTACCACAGATGCGGTGCGAACG ATTGCTCGCGACGAGGGTGCGCTAGCGCTGTACAAAGGAGCGGTGCCGGC GCTGATGCTGTGCGGGCAAGGCGCCGTGCAGTTCACCGCGTACGAATGGC TCAAGGCTAGGGTGCCAAAGCAGAGCGAAAACGTGAGCACAGTAGGCACG CCAACCACAGTGAGGACAGGAGTCCACTCCTGTTTTTATCAGTGCATTGT CAGGTCTCGAACGTGGAGTTCGCCGTACATTCGCCTTACGCAGGAGTGCA TTGCAGACGGTTGGCAAACTATTGCTATTTTCGGCCGCATTGCGACCCAA GAACGGGTGACCGAAGCGCGAAAGAACGGCAGGGTAGGGCACGACCTGCT CGCCATGTCGAGAGTCCACATTTTGTGTAATGTTGAGTGTGCTTTGGCGT TGCATACTTTTTGACGAGGGCGAACTGTGGGGCTGTACGGACGGGCTGGG TGTTTTGGAGAACAGTGGTGCCTCCTCCAACGAAAACTACGTTTGTTTGC TGTTTGATTTTGACGTGGCGCAGACACCGCTCGAGTCGCTCGTAATGGGT GCTGTGTCCAAGATTATGTCAAGCCTTGTGACGTACCCCAGCCAGGTGAG GTCACATGGTGCGCTTGATGAATAGATTTTCATCTTGATTTTTTGGACTT TTCTTTTGGCGCATGCGTGGGCCTGTTCGTGGATCGCACATTTCTTAAAA ATCTGCATCAATTGTGAGGGTAATGTCACAACGTGTCATGTCATGTGCAG TAGCGTATCTCACTGTGTGTCGGTGCTACTTCGTTCGGTGTCTCGTACAT GCTCACGCAATTTTGGTGATCGTATAACTTTTCGCCCGTAGTGATCAGAT TCCATGATTATTTTTATTTTCTTTGGGAGAAGCCAAGCCTGCCAACCACC GTTCGTAGAGTGAAGCGACTTCTTGGACTTCAAACCATCACCTTTGCCTG CATTTTCTCCGACTGATGTTGATGGGAACCAGGTGATTAAATCCCGGCTG CAACAGCGGGGTACAGAGGAGGAGATACGAACAGGAGTATCTCGTTACCG CGGGGTTGTACACTGTGCAACAAGCATTGCACAAAAAGAGGGCGTACGCG GATTTTTTAAGGGAAGCGTTGCGTACGCCGTCAGGGCAGCGCCAGCTTCT GCCATTACGTTCGTAGTA
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10233:2..5019-

>mRNA_H-fluviatilis_contig10233.527.1 ID=mRNA_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1776bp|location=Sequence derived from alignment at H-fluviatilis_contig10233:2..5019- (Heribaudiella fluviatilis SAG_13_90)
GAGCTGTTCCGGAAGCGCGACCTCGAACGCGCGCAGCGCCCGTACGGAGC
TCATCATCTCATCGCGGGAACGTCAGCGGGGCTTGTGACGACCGCGGCGC
TGTACCCGTTGGACCTCATCAAAACTCGATATCAGGAGCTGTTCCGGAAG
CGCGACCTCGAACGCGCGCAGCGCCCGTACGGAGCTCATCATCTCATCGC
GGGAACGTCAGCGGGGCTTGTGACGACCGCGGCGCTGTACCCGTTGGACC
TCATCAAAACTCGATATCAGGTCTACGACAAGGGACCGTCCCCGTACGGG
TCTGTGGGATCGGCGTTTCGAGCGATCGTGCGGGAAGAAGGAGCAAGAGC
GCTCTATCAGGTCTACGACAAGGGACCGTCCCCGTACGGGTCTGTGGGAT
CGGCGTTTCGAGCGATCGTGCGGGAAGAAGGAGCAAGAGCGCTCTATCAG
GGTCTAGGCCCAGCGCTAATTGGGAACGCGGTGGCGTGGGGAGGGTTCTT
CTACTGCTACGAGAAAATCAAGGGTCTAGGCCCAGCGCTAATTGGGAACG
CGGTGGCGTGGGGAGGGTTCTTCTACTGCTACGAGAAAATCAAGCGATAT
TTACGCGGCAGGTCGAAAAGCGGCGCTGAATTAGGCTCGTTGCATCACCT
CGGGGCTGGCTATGCAGCGGGAGCGATCATGGTGCTCGCTACCAACCCCG
TATGGATGATCAAGACCCGGATGCAGCTGCAGAACAGTGCAGCGAATGGG
GGTTCTGTGCGACCTTACGCTGGACTGTCCGCGATATTTACGCGGCAGGT
CGAAAAGCGGCGCTGAATTAGGCTCGTTGCATCACCTCGGGGCTGGCTAT
GCAGCGGGAGCGATCATGGTGCTCGCTACCAACCCCGTATGGATGATCAA
GACCCGGATGCAGCTGCAGAACAGTGCAGCGAATGGGGGTTCTGTGCGAC
CTTACGCTGGACTGTCCGATGCGGTGCGAACGATTGCTCGCGACGAGGGT
GCGCTAGCGCTGTACAAAGGAGCGGTGCCGGCGCTGATGCTGTGCGGGCA
AGGCGCCGTGCAGTTCACCGCGTACGAATGGCTCAAGGCTAGGGTGCCAA
AGCAGAGCGAAAACATGCGGTGCGAACGATTGCTCGCGACGAGGGTGCGC
TAGCGCTGTACAAAGGAGCGGTGCCGGCGCTGATGCTGTGCGGGCAAGGC
GCCGTGCAGTTCACCGCGTACGAATGGCTCAAGGCTAGGGTGCCAAAGCA
GAGCGAAAACACACCGCTCGAGTCGCTCGTAATGGGTGCTGTGTCCAAGA
TTATGTCAAGCCTTGTGACGTACCCCAGCCAGACACCGCTCGAGTCGCTC
GTAATGGGTGCTGTGTCCAAGATTATGTCAAGCCTTGTGACGTACCCCAG
CCAGGTGATTAAATCCCGGCTGCAACAGCGGGGTACAGAGGAGGAGATAC
GAACAGGAGTATCTCGTTACCGCGGGGTTGTACACTGTGCAACAAGCATT
GCACAAAAAGAGGGCGTACGCGGATTTTTTAAGGGAAGCGTTGCGTACGC
CGTCAGGGCAGCGCCAGCTTCTGCCATTACGTTCGTAGTAGTGATTAAAT
CCCGGCTGCAACAGCGGGGTACAGAGGAGGAGATACGAACAGGAGTATCT
CGTTACCGCGGGGTTGTACACTGTGCAACAAGCATTGCACAAAAAGAGGG
CGTACGCGGATTTTTTAAGGGAAGCGTTGCGTACGCCGTCAGGGCAGCGC
CAGCTTCTGCCATTACGTTCGTAGTA
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