mRNA_H-fluviatilis_contig10233.527.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI) HSP 1 Score: 369 bits (947), Expect = 3.860e-126 Identity = 180/236 (76.27%), Postives = 207/236 (87.71%), Query Frame = 1
Query: 1 ELFRKRDLERAQRPYGAHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPLESLVMGAVSKIMSSLVTYPSQVI 708
E+F KR+ + +R YGA+HLIAGT+AG+VTTAALYPLDL+KTRYQVYDKGPSPY S+G+AFR I+REEGARALYQGLGPAL+GNAVAWGGFFYCYEKIK +R R A+LG++HHLGAGY AGA+MVLATNPVWMIKTRMQLQ+ A G VRPY+GL DAVRTI R+EG LALYKGAVPALMLCGQGAVQF YEWLKARVPK++ENTP ESL+MG SKI+S+LVTYP+Q +
Sbjct: 27 EMFSKRE-SKGKRHYGANHLIAGTTAGVVTTAALYPLDLVKTRYQVYDKGPSPYKSLGTAFRTIIREEGARALYQGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA) HSP 1 Score: 283 bits (723), Expect = 5.940e-91 Identity = 161/285 (56.49%), Postives = 200/285 (70.18%), Query Frame = 1
Query: 55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAE-LGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQ---NSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ-SENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTE--EEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
HLIAGT+AGLV+T A YPLDL+KTRYQ Y +G SPY S+ SAF+ I +EG RALY GL P++ G +AWG +FY Y+ K L+ + +GAE L HHL AG I+VL NPVW++KTR+QLQ N+ G RPY G +DA+ TIAR+EGALALYKG VPA++L QGA+QF AYEWLK VP+ ++ P+ESLVMG SKI +S+VTYP+QVIK+RLQ R G S Y G CA I ++EG RGFF+G V YA+RAAPASA+TFVV
Sbjct: 51 HLIAGTAAGLVSTTAFYPLDLVKTRYQAYHQGASPYASLSSAFKTIAEQEGWRALYAGLVPSVWGGGLAWGAYFYLYQMSKDALQ--TGTGAEQLNVSHHL----TAGNILVLLGNPVWLVKTRLQLQTRDNTQRLGR--RPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVV 327
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA) HSP 1 Score: 261 bits (668), Expect = 4.290e-84 Identity = 137/226 (60.62%), Postives = 168/226 (74.34%), Query Frame = 1
Query: 52 HHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQN------SAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ-SENTPLESLVMGAVSKIMSSLVTYPSQVI 708
HHLIAGT AG+ +T ALYPLDLIKT YQ YDKG SPY S+G+AF IV++ G LY GLGPA++G+ V+WGG+FY YE K +R R +LG +HHL AG AAG +VL TNP+W++KTRMQLQ +AA G RPY GLSDAV TI R+EGALALYKG VPAL+L GQGA+QF AYEWLKARVP+ ++N P ESL+MGA SK+ +SLV P+ ++
Sbjct: 1 HHLIAGTVAGVTSTTALYPLDLIKTHYQAYDKGKSPYRSLGAAFTTIVKQNGWSGLYSGLGPAVLGSGVSWGGYFYLYEWAKTSMR-RFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGR--RPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTPNMLL 223
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.150e-69 Identity = 136/302 (45.03%), Postives = 187/302 (61.92%), Query Frame = 1
Query: 55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQ--------------------NSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPLESL-VMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYR--GVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
HL+AG AG V++A L PLDLIK QVYD+ P+ S+ ++IV++EG R LY+GL PAL+ N ++WGG+FY YE K RYLR ++ S+HHL + + AG IMV TNP+W+IKTRMQLQ ++A++ G Y G++ A+RTI R+EG L LYKG +PAL+L GA+QF YEWLK V + P+ S V+G ++KI++ LVTYP QV+K+RLQQR T G SR+R C I + EG+ GFFKG + ++ AP++ ITF+V
Sbjct: 78 HLVAGLVAGAVSSALLLPLDLIKVHLQVYDRAGRPFPSMYKGMQSIVQQEGYRGLYKGLTPALLANGLSWGGYFYFYEHAKNRYLRQHR----QITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVV--EPYQAPVFSFSVLGGMAKILAGLVTYPPQVVKARLQQRDT------GASRWRYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLV 367
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS) HSP 1 Score: 218 bits (555), Expect = 2.250e-66 Identity = 133/291 (45.70%), Postives = 173/291 (59.45%), Query Frame = 1
Query: 61 IAGTSAGLVTTAALYPLDLIKTRYQVYDKGP-SPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAA-------NGGSVRP-YAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKA------RVPKQSENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
+AG + G +T LYPLDL+K R QV ++ P + + +A + ++R EG LY+GL PA+IG+A +WGGFF YE++K+ + R A L +GA MV TNP+W+IKTR+QLQNS NG ++P Y GL A TI ++EG LALYKG+VPALML G +QF +YEWLK R + LVMGA SK ++S TYP QVIK+RLQQR E Y GV+ C I + EGV GFFKG V A+R AP++AITFVV
Sbjct: 1 LAGIAGGSASTILLYPLDLVKVRLQVDERRPKTQQHAPPAAAKRVIRTEGYAGLYKGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIKFANAA----LDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKPPYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWNRTIGERLRASFGYLVMGATSKFIASTTTYPLQVIKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVV 279
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A485KGD8_9STRA (Aste57867_4021 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGD8_9STRA) HSP 1 Score: 217 bits (552), Expect = 8.610e-66 Identity = 123/288 (42.71%), Postives = 169/288 (58.68%), Query Frame = 1
Query: 55 HLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGA--------RALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPL--ESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
H +AG +AG +TA LYPLDL+KTRYQV++ P P+ S+ AF +IVR +GA R LY+G+ PAL G ++WG +F YE K + A +G H AG AGA+ V TNP+W++K RMQ+Q A + PY +++A++ I +EGALALYKG VPAL+L GA +F AYEWLK +T SL MGA+++ +S TYP QVIK+RLQQ G + +Y+G C I Q EG+RG++KG ++ P A+ F V
Sbjct: 14 HCVAGVAAGGFSTAVLYPLDLVKTRYQVHENSPKPFRSLAHAFASIVRTDGAAPTRRYHVRGLYEGMSPALYGTTISWGLYFLFYEHAKSFYEQHPAIPASVG---HFAAGIQAGAMCVPLTNPIWLVKVRMQVQ---ATHATAVPYTSMTNALQRIVAEEGALALYKGVVPALLLTTHGAFKFVAYEWLKKEYQTNVGSTLSIPHSLAMGALAQAFASTATYPYQVIKTRLQQGGIWAD------KYKGTWDCTKQIYQHEGMRGYYKGLTPNLIKVLPTGALIFAV 289
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: UPI001CB8D61A (folate transporter 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D61A) HSP 1 Score: 213 bits (542), Expect = 5.090e-64 Identity = 128/293 (43.69%), Postives = 174/293 (59.39%), Query Frame = 1
Query: 61 IAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSP----YGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKA------RVPKQSENTPLESLV------MGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
+AG+ AGL T +PLD+++TR+QVYD G +P Y + A I R EG R LY G PA++G+ ++WG +FY Y K RY++ R K+GA + HL + AG ++ L TNP+W++KTR+QLQ PYAG SDA++TI RDEG ALYKG +P L L GA+QFTAYE L+ +P S +SL +GA SK+ + L TYP QVI+SRLQQR + GV RY H T AQ EG +GF++G A ++ PA++ITF+V
Sbjct: 25 VAGSIAGLATVTFTHPLDVVRTRFQVYD-GRNPNLPCYRNTPHALFTIARSEGLRGLYAGFNPAVLGSTISWGLYFYFYNNAKQRYMKSRDKTGARI----HLASAAEAGGLVCLFTNPIWVVKTRLQLQTPQLQAP---PYAGFSDALKTILRDEGWRALYKGLLPGLFLVTHGAIQFTAYEELRKIIVEFKGIPNSSNAKNSDSLTTFDYAALGATSKLAAILATYPFQVIRSRLQQRPSVN----GVPRYLDSRHALTKTAQLEGTKGFYRGITANLLKNLPAASITFIV 305
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A5D6XH46_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH46_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.240e-64 Identity = 125/287 (43.55%), Postives = 164/287 (57.14%), Query Frame = 1
Query: 64 AGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQN-------SAANGGSVR-----PYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQ--SENTPLESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITF 882
AG AG ++TA LYPLDL+K RYQV+DK Y S+G FR IV EEG RAL++G+ PAL G+A++WG + Y+ K + SG GS + + AG I V TNP+W++K RMQ+Q+ SA + + PY ++DA R I +EG LALYKG +PAL L GA +F AYE +KA K E + +L MGA+S+ +S TYP QVIK+RLQQ G +Y G CAT I + EG RG FKG V ++ P AI F
Sbjct: 23 AGLGAGAISTALLYPLDLVKVRYQVHDKSARRYQSLGHGFRTIVAEEGTRALFRGMSPALYGSALSWGLYMLFYQNAKERYARLADSGIIQGSWQYFFSALEAGIICVPITNPIWLVKVRMQVQSNVQLKTMSAGKDAAAKLAKHVPYKSMTDAFRRIVAEEGPLALYKGVIPALFLTTHGAFKFVAYETVKAAYQKHWGPEMDVIPTLAMGAISQAFASTATYPYQVIKARLQQGGDS------ALQYSGTWDCATKIVRHEGYRGLFKGLVPNLLKVIPTGAIVF 303
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: A0A6G0WPA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPA9_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.060e-63 Identity = 124/290 (42.76%), Postives = 173/290 (59.66%), Query Frame = 1
Query: 49 AHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGPSPYGSVGSAFRAIVREEGA-------RALYQGLGPALIGNAVAWGGFFYCYEKIKRYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALMLCGQGAVQFTAYEWLKARVPKQSENTPL---ESLVMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
A HL+AG +AG ++TA LYPLDL+KTRYQ+++ P Y S+ AF +IVR+EG RALYQG+ PAL G ++WG +F YE K + ++ A +G H +G AGA+ V TNP+W++K RMQ+Q A + PY +S+A++ IA +EG LALYKG +PAL L GA +F AYE LK + PL +L +GA+++ +S TYP QVIK+RLQQ G + +Y G C I Q+EG+RGF+KG ++ P A+ F V
Sbjct: 9 AKHLVAGVAAGGISTAILYPLDLVKTRYQIHESSPKAYRSLLQAFTSIVRQEGGSSSRWNVRALYQGMSPALYGTTLSWGLYFLFYEHAKSFYAEQTTLPAWVG---HFASGIQAGAMCVPLTNPIWLVKIRMQVQ---ATHATQVPYTSVSNALKRIAAEEGILALYKGMIPALFLTTHGAFKFVAYEALKTEY-NELVGKPLMFPHTLTVGALAQAFASTATYPYQVIKTRLQQGGPLAD------KYHGTWDCTKRIFQQEGIRGFYKGLTPNLIKVLPTGALIFAV 285
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Match: UPI000CED13D0 (folate transporter 1, chloroplastic n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED13D0) HSP 1 Score: 211 bits (537), Expect = 2.270e-63 Identity = 128/293 (43.69%), Postives = 178/293 (60.75%), Query Frame = 1
Query: 64 AGTSAGLVTTAALYPLDLIKTRYQVYDKGPS---PYGSVGSAFRAIVREEGARALYQGLGPALIGNAVAWGGFFYCYEKIK-RYLRGRSKSGAELGSLHHLGAGYAAGAIMVLATNPVWMIKTRMQLQNSAANGGSVRPYAGLSDAVRTIARDEGALALYKGAVPALML-CGQGAVQFTAYEWL----------KARVPKQSENTPLESL---VMGAVSKIMSSLVTYPSQVIKSRLQQRGTEEEIRTGVSRYRGVVHCATSIAQKEGVRGFFKGSVAYAVRAAPASAITFVV 888
AG AG T AA++PLD+++TR+QV D S Y + +A I R EG R LY G PA++G+ V+WG +F+ Y++ K RY R R++ +L HHL + AGA++ L TNP+W++KTR+QLQN RPY+G DA+RTI R+EG +ALY+G VP L L GA+QFTAYE L K S +TPL S +GA SKI++ L++YP QVI++RLQQR E GV RY +H A+ EG+RGF++G ++ PA++ITF+V
Sbjct: 15 AGAVAGFATVAAMHPLDVVRTRFQVNDGRVSNIPTYKNTANAIFTIARSEGLRGLYAGFSPAVLGSTVSWGLYFFFYDRAKQRYSRNRAE---KLSPGHHLASAAEAGALVCLCTNPIWLVKTRLQLQNPLHQ---TRPYSGFYDALRTIMREEGWIALYRGIVPGLFLQVSHGAIQFTAYEELRKVLIDLKSGKNTEKSGSSDTPLNSFDYAALGASSKIVAMLLSYPFQVIRARLQQRPCNE----GVPRYMDSLHVVKDTARFEGLRGFYRGITPNLLKNVPAASITFIV 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10233.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10233.527.1 >prot_H-fluviatilis_contig10233.527.1 ID=prot_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=296bp ELFRKRDLERAQRPYGAHHLIAGTSAGLVTTAALYPLDLIKTRYQVYDKGback to top mRNA from alignment at H-fluviatilis_contig10233:2..5019- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10233.527.1 ID=mRNA_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5018bp|location=Sequence derived from alignment at H-fluviatilis_contig10233:2..5019- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10233:2..5019- >mRNA_H-fluviatilis_contig10233.527.1 ID=mRNA_H-fluviatilis_contig10233.527.1|Name=mRNA_H-fluviatilis_contig10233.527.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1776bp|location=Sequence derived from alignment at H-fluviatilis_contig10233:2..5019- (Heribaudiella fluviatilis SAG_13_90)back to top |