mRNA_H-fluviatilis_contig10220.509.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: D7FNU1_ECTSI (CG-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU1_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.890e-34 Identity = 63/84 (75.00%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 TDLESELNALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLT 252
TDLESELNALD++GFSVLHYTCLH+L AL+PVL++RGADVNLRTGDG+ QTPLHLAA G++ IVQEL+K+GA +DA D+ GLT
Sbjct: 1089 TDLESELNALDSRGFSVLHYTCLHNLGALVPVLVERGADVNLRTGDGKKQTPLHLAARGGSIGIVQELVKQGAMVDAADSDGLT 1172
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A6H5KVR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR6_9PHAE) HSP 1 Score: 133 bits (334), Expect = 2.900e-34 Identity = 63/84 (75.00%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 TDLESELNALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLT 252
TDLESELNALD++GFSVLHYTCLH+L AL+PVL++RGADVNLRTGDG+ QTPLHLAA G++ IVQEL+K+GA +DA D+ GLT
Sbjct: 1082 TDLESELNALDSRGFSVLHYTCLHNLGALVPVLVERGADVNLRTGDGKKQTPLHLAARGGSIGIVQELVKQGAMVDAADSDGLT 1165
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A2G8KLY7_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KLY7_STIJA) HSP 1 Score: 68.2 bits (165), Expect = 5.110e-12 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 22 NALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLT 252
NALDT G++ LHY C ++ + +LL GAD+N+ T G +PLH AAY G++++ + L+ +GAN D G T
Sbjct: 54 NALDTSGYTALHYACRNNNEDIATLLLSHGADINITTRSG-GASPLHRAAYMGHVRLTKFLLNKGANPSLQDTDGKT 129
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A851Z329_9AVES (PP16A phosphatase (Fragment) n=1 Tax=Halcyon senegalensis TaxID=342381 RepID=A0A851Z329_9AVES) HSP 1 Score: 69.3 bits (168), Expect = 7.510e-12 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 40 GFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTPGD 261
G + LH C+ + A++PVLLD GADVN R D TPLH AA G+LQ+VQ L+ RGA++ A+++ G P D
Sbjct: 103 GLTALHQCCIDAAGAVVPVLLDAGADVNAR--DSELWTPLHAAATCGHLQLVQLLIHRGADLLAINSDGNMPYD 174
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A7K9BWS8_9PICI (PP16A phosphatase (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7K9BWS8_9PICI) HSP 1 Score: 67.0 bits (162), Expect = 4.570e-11 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 40 GFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTPGD 261
G + LH C+ A++PVLLD GADVN R D TPLH AA G+L++VQ L++RGA++ A ++ G P D
Sbjct: 104 GLTALHQCCIDDAGAVVPVLLDAGADVNAR--DSELWTPLHAAATCGHLRLVQLLIQRGADLLATNSDGNMPYD 175
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A7K8XUA0_9PICI (PP16A phosphatase (Fragment) n=2 Tax=Ramphastidae TaxID=57381 RepID=A0A7K8XUA0_9PICI) HSP 1 Score: 67.0 bits (162), Expect = 4.880e-11 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 40 GFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTPGD 261
G + LH C+ A++PVLLD GADVN R D TPLH AA G+L++VQ L++RGA++ A ++ G P D
Sbjct: 104 GLTALHQCCIDDAGAVVPVLLDAGADVNAR--DSELWTPLHAAATCGHLRLVQLLIQRGADLLATNSDGNMPYD 175
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A7M7JIG7_VARDE (Non-specific serine/threonine protein kinase n=5 Tax=Varroa TaxID=62624 RepID=A0A7M7JIG7_VARDE) HSP 1 Score: 66.2 bits (160), Expect = 9.630e-11 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 16 ELNALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDG-RDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTPGD 261
ELN D+ G + L C ++ A +LL G + N+ G+ R +TPLHLAA A NL++VQ LM+ GA+++A D G TP D
Sbjct: 41 ELNTPDSSGRTALFDACTNADPACARILLQAGGNPNVAAGEKERGRTPLHLAAEASNLEVVQLLMQHGADINARDCDGFTPFD 123
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: A0A663N2P7_ATHCN (Protein phosphatase 1 regulatory subunit 16A n=3 Tax=Strigidae TaxID=30459 RepID=A0A663N2P7_ATHCN) HSP 1 Score: 63.9 bits (154), Expect = 5.890e-10 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 40 GFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTPGD 261
G + LH C+ ++ VLL+ GADVN R D TPLH AA G+L++VQ L++RGAN+ AV++ G P D
Sbjct: 104 GLTALHQCCIDDYGDVVTVLLEAGADVNAR--DSELWTPLHAAATCGHLRLVQLLIRRGANLLAVNSDGNMPYD 175
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: UPI0018859B1E (protein phosphatase 1 regulatory subunit 16A-like isoform X1 n=3 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018859B1E) HSP 1 Score: 63.9 bits (154), Expect = 6.000e-10 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 22 NALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQG 246
N+ + G + LH C+ A++ +LLD GA+V+ + D TPLH AA G+L +V++L++RGAN+ AV+A G
Sbjct: 102 NSTNEDGLTALHQCCIDDSEAMMALLLDHGANVDAK--DSERWTPLHAAATCGHLHLVKQLVERGANLLAVNADG 174
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Match: UPI00159C93BF (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X1 n=3 Tax=Hippoglossus TaxID=8266 RepID=UPI00159C93BF) HSP 1 Score: 63.9 bits (154), Expect = 6.150e-10 Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 1 TDLESELNALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNL-RTGDGRDQTPLHLAAYAGNLQIVQELMKRGANMDAVDAQGLTP 255
T ++++A D G + LH +C + + ++L++ D +L + QTPLHLAA +G Q VQEL+ RGAN+ VD GLTP
Sbjct: 905 TGASAKISATDKDGNTALHLSCSNGKEDCVMLILEKLTDTSLINATNAALQTPLHLAARSGLKQAVQELLSRGANVQTVDENGLTP 990 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10220.509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10220.509.1 >prot_H-fluviatilis_contig10220.509.1 ID=prot_H-fluviatilis_contig10220.509.1|Name=mRNA_H-fluviatilis_contig10220.509.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=87bp TDLESELNALDTQGFSVLHYTCLHSLSALLPVLLDRGADVNLRTGDGRDQback to top mRNA from alignment at H-fluviatilis_contig10220:6818..7527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10220.509.1 ID=mRNA_H-fluviatilis_contig10220.509.1|Name=mRNA_H-fluviatilis_contig10220.509.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=710bp|location=Sequence derived from alignment at H-fluviatilis_contig10220:6818..7527- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10220:6818..7527- >mRNA_H-fluviatilis_contig10220.509.1 ID=mRNA_H-fluviatilis_contig10220.509.1|Name=mRNA_H-fluviatilis_contig10220.509.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=522bp|location=Sequence derived from alignment at H-fluviatilis_contig10220:6818..7527- (Heribaudiella fluviatilis SAG_13_90)back to top |