mRNA_H-fluviatilis_contig10217.502.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 197 bits (501), Expect = 2.850e-53 Identity = 107/250 (42.80%), Postives = 148/250 (59.20%), Query Frame = 1
Query: 10 ASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDIT---------------VLERLITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGT-RTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
A+C+G D+LQG+W + L A E FTM+ GL++P RVPQGVLNAT +++ +M +L L C+VWV DI +L R + AAHK TF+ TS++WCGK+YS ++H +R+ GL LRRPE GEL+QF+Q NW+RTSL M+++ AP+RE LE + G T+R+A+++ I + WT W+ A M+ NA L +P VLMFPD SD GSF QV
Sbjct: 745 ATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMN-SILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQV 990
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.900e-51 Identity = 109/250 (43.60%), Postives = 146/250 (58.40%), Query Frame = 1
Query: 10 ASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDIT---------------VLERLITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRT-TRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
A +G D+LQ +W L A E FT+ T GL+TP RVPQG+LNAT +F+A++ +L GL C VWV D+ +L+RL + AAHK TFF TSI WCGK+YS+ V+H ER+ GL +RRPE GEL+QF+Q NW+RTSL MA+V P+R LE+ L G ++ T+R+A ++ I + T W AA ++ A L++P VLMFPD SD GSF QV
Sbjct: 843 AKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLT-RILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQV 1088
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6A4F4L9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4F4L9_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.220e-37 Identity = 86/246 (34.96%), Postives = 132/246 (53.66%), Query Frame = 1
Query: 19 FGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDI-----TVLERLITRE--ISTAAH--------KVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
+G FD ++GFW L L ++ E + T EG+FTP RVPQG +A HF A+ME + L+++ L+W+ D+ T+ E L E T AH K + S+ WCGKI S+ G+ H RI+ L+ + P GEL QF+ +NWMR SL+D A+ P+++ L+ L+G R T+R+AA ++ + +D ++L N+ LA+PK +F D SD+ + QV
Sbjct: 73 YGLFDFIKGFWQLPLAESSQEMLSYATDEGVFTPTRVPQGSCDAALHFPATME-KCFAELVYKSLLIWIDDLLLFADTIEEYLAALETLFDTMAHYGLKFSVMKTCLYQQSVTWCGKIISENGMTHDPRRIDALLNMPPPSTAGELQQFICASNWMRDSLIDYARTIQPLQQCLDRGLEGKRKTKRVAAGIALQLNE---SELVSFDNVKKLLANSSTLAHPKDNATFALFCDASDVGWSAILTQV 314
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A225VK89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VK89_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.230e-36 Identity = 89/250 (35.60%), Postives = 132/250 (52.80%), Query Frame = 1
Query: 7 GASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDI---------------TVLERLITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
G + FD L+GFW L LD + E + MT +G+FTP RVPQG +A HF+A++E+ VL L+ + +VW+ D+ VL +L + K + FLT + WCG+I + +G+ H ERI+ L + P EL QF+ +NWMR LVD A+V P++E L++ L GT+ T+R AA I T ++A +L ++ LAYP E ++ + D SD G QV
Sbjct: 656 GKMFYALFDFLKGFWQLPLDESCREYLSYMTDKGIFTPTRVPQGSTDAALHFQATVEM-VLGDLVNKNVIVWIDDLLVFADSAHELLDVIKAVLTKLDEFGLLLNPKKSSLFLTEVRWCGRIINRQGIGHDPERIKALQDMPAPTTAAELQQFLCASNWMRAGLVDYARVARPLQEKLDDALSGTKKTKRAAAGVQI---TLTDSELKSFEAVKELLGHSAMLAYPDPEKQLCLLSDASDYGWGLVVSQV 901
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A2P4XAX7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAX7_9STRA) HSP 1 Score: 143 bits (360), Expect = 9.180e-36 Identity = 78/224 (34.82%), Postives = 125/224 (55.80%), Query Frame = 1
Query: 19 FGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDITVLERLITREI---STAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESD 681
+G FD ++GFW L L + E + T EG+FTP RVPQG ++ HF+A+ME + L++ L+W+ D+ V I + + +A K + S+ WCG++ S GV + +RI+ L + P L QF+ +NWMR SL+D A++T P++ L++ L R T+RIAA VI+ +D + +++ NA +L+YP E + +F D SD
Sbjct: 142 YGLFDFIKGFWQLPLTKNSQEILSYATDEGIFTPTRVPQGSCDSALHFQATME-KCFANLLYESLLIWIDDLLVFTNSIDEYLEGLNFSAAKTRLYQQSVTWCGRVISPNGVSYDPKRIDTLANMPVPTTAAGLQQFICASNWMRDSLLDYAKITQPLQTKLDKALDRKRKTKRIAAGVVIKLDD---SEVDSFSKVKQLIANATKLSYPSNEATMRLFCDASD 361
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6A4C6S8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C6S8_9STRA) HSP 1 Score: 145 bits (365), Expect = 3.500e-35 Identity = 85/239 (35.56%), Postives = 127/239 (53.14%), Query Frame = 1
Query: 7 GASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDITVLER---------------LITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDES 678
G+ FG FD +GFW + L + E F+ +T++G+FTP RVPQG ++ HF+A M +VL L+FR VW+ D+ + R L R++ A K F ++WCGK+ EGV+H ER+ L ++ P G L F+ NW+R S+VD A+ TAP++E LE +Q +R R+ S VI E W+ + M++ + +LA+P K V MF D S
Sbjct: 263 GSYGFGAFDFHKGFWQMPLHPNSREIFSFVTEDGVFTPTRVPQGASDSAVHFQAQMN-DVLKDLLFRSVFVWIDDVLLYARTAGEYLENLSAFFAILRQRKLKLNARKCKLFAKRVKWCGKVIDGEGVEHDPERLAALQQMPLPPTGAALQHFLCAFNWLRDSMVDYARTTAPLQEKLERVMQ-SRGCRKAQLSGVILE--WSDDEADAFRKTLEMVERSCKLAFPDKGATVCMFSDAS 497
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6A3UVY4_9STRA (RNA-directed DNA polymerase n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UVY4_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.150e-34 Identity = 84/241 (34.85%), Postives = 128/241 (53.11%), Query Frame = 1
Query: 7 GASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDITV-----------LERLIT----REISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQ--GTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDES 678
GA FG FD +GFW + L + E F+ +T++G+FTP RVPQG ++ HF+A M ++L L+FR LVW+ D+ + LE+ + R++ A K F +EWCGK+ EGV+H ER+ L + P G L F+ NW+R S+VD A+ TAP++E LE+ ++ G R + AS +W+ A + M++ + +L +P K V MF D S
Sbjct: 625 GAYGFGAFDFHKGFWQMPLHPNSQEMFSFVTEDGVFTPTRVPQGASDSAVHFQAQMN-DILKDLLFRSVLVWIDDVLLFAQSAGAYLKNLEQFFSILRQRKLKLNAKKCKLFAKRVEWCGKLIDGEGVEHNPERLAALRPMPLPPTGAALQHFLCALNWLRDSMVDYARTTAPLQEKLEQVMRARGRRKAQLSGASL-----EWSDGEAAAYRETLAMVERSCKLVFPDKAATVCMFTDAS 859
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A225WF48_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WF48_9STRA) HSP 1 Score: 141 bits (355), Expect = 7.890e-34 Identity = 87/244 (35.66%), Postives = 131/244 (53.69%), Query Frame = 1
Query: 1 AGGASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDI--------TVLERLITREI---------STAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESD 681
A G FG FD L+GFW L L E + MT +FTP RVPQG +A HF+ +ME + GL++ L+W+ D+ T L+++ +E+ + K + + TS++WCGK+ S++G+ H ERI L + P GEL QF+ ANWMR SLVD A+ AP++ L+ L + T+R+AA I+ E +RQ ++A ML ++ LA+P + + D SD
Sbjct: 622 AKGMKHFGLFDFLKGFWQLPLAEWCQEILSYMTDAKIFTPRRVPQGCSDAAIHFQQTME-KCFAGLLYEHLLIWIDDLLLFAADIETYLQKM--QELFGLINDFGLKLSVKKSSLYQTSVKWCGKVVSEDGIAHDPERIACLRSMPEPTNAGELQQFLCAANWMRESLVDYARTVAPLQTRLDTALASGKRTKRVAAG--IKIELTCDERQT-FEAVKEMLGHSATLAFPDNDAVTCLLTDASD 859
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6A3SZ70_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3SZ70_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.750e-33 Identity = 85/250 (34.00%), Postives = 126/250 (50.40%), Query Frame = 1
Query: 7 GASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDI---------------TVLERLITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
G + FD ++ FW L L A E + MT G+FTP RVPQG +A HF++++E EVL + L+W+ D+ +L+RL K F T I+WCG++ + +GV H ERI+ L K+ P EL +F+ NWMR LVD A+V P++E L+E L+GT+ ++R AA I + A ++A +L N+ L YP ++ + D SD G QV
Sbjct: 572 GKEFYAIFDFIKCFWQLPLHKAYQEILSYMTDRGIFTPTRVPQGCTDAALHFQSTVE-EVLKEYLQECVLLWIDDLLAYANTVVELMDVIEAILKRLDEYGFKLNPRKCKLFQTEIKWCGRVINKDGVGHDPERIQALQKIPPPSTAAELQEFVCATNWMREGLVDYARVVKPLQERLDESLRGTKRSKRAAAGIRI---SLSHSELASFEAVKELLSNSAMLTYPDPSKQLCLLSDASDSGWGLIVSQV 817
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Match: A0A6A3XJV5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XJV5_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.960e-33 Identity = 85/250 (34.00%), Postives = 126/250 (50.40%), Query Frame = 1
Query: 7 GASCFGPFDILQGFW*LLLDAAACEAFTMMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDI---------------TVLERLITREISTAAHKVTFFLTSIEWCGKIYSDEGVKHATERIEGLVKLRRPEKGGELLQFMQVANWMRTSLVDMAQVTAPMRELLEEFLQGTRTTRRIAASKVIREEDWTGQRQALWDAAPRMLKNAEELAYPKKEWKVLMFPDESDLFSGSF*RQV 711
G + FD ++ FW L L A E + MT G+FTP RVPQG +A HF++++E EVL + L+W+ D+ +L+RL K F T I+WCG++ + +GV H ERI+ L K+ P EL +F+ NWMR LVD A+V P++E L+E L+GT+ ++R AA I + A ++A +L N+ L YP ++ + D SD G QV
Sbjct: 572 GKEFYAIFDFIKCFWQLPLHKAYQEILSYMTDRGIFTPTRVPQGCTDAALHFQSTVE-EVLKEYLQECVLLWIDDLLAYANTVVELMDVIEAILKRLDEYGFKLNPRKCKLFQTEIKWCGRVINKDGVGHDPERIQALQKIPPPSTAAELQEFVCATNWMREGLVDYARVVKPLQERLDESLRGTKRSKRAAAGIRI---SLSHSELASFEAVKELLSNSAMLTYPDPSKQLCLLSDASDSGWGLIVSQV 817 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10217.502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10217.502.1 >prot_H-fluviatilis_contig10217.502.1 ID=prot_H-fluviatilis_contig10217.502.1|Name=mRNA_H-fluviatilis_contig10217.502.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=204bp MMTQEGLFTPLRVPQGVLNATPHFEASMELEVLVGLIFRICLVWVGDITVback to top mRNA from alignment at H-fluviatilis_contig10217:7147..8099+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10217.502.1 ID=mRNA_H-fluviatilis_contig10217.502.1|Name=mRNA_H-fluviatilis_contig10217.502.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=953bp|location=Sequence derived from alignment at H-fluviatilis_contig10217:7147..8099+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10217:7147..8099+ >mRNA_H-fluviatilis_contig10217.502.1 ID=mRNA_H-fluviatilis_contig10217.502.1|Name=mRNA_H-fluviatilis_contig10217.502.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1224bp|location=Sequence derived from alignment at H-fluviatilis_contig10217:7147..8099+ (Heribaudiella fluviatilis SAG_13_90)back to top |