mRNA_H-fluviatilis_contig102156.499.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI) HSP 1 Score: 121 bits (303), Expect = 9.840e-32 Identity = 65/83 (78.31%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 4 ANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
A F G LDILVNNVGT+IRKATVDYTPEE A VMDTNF SLFLLT+L HPLLKAAAAV G++E GGSSV+NISSVAG+T I
Sbjct: 120 AEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPI 202
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI) HSP 1 Score: 103 bits (258), Expect = 2.250e-25 Identity = 54/84 (64.29%), Postives = 70/84 (83.33%), Query Frame = 1
Query: 4 ANAEFDGKLDILVNNVGTSIRKA-TVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
A FDG LDILVNNVG SIRK+ T D+TPEEF +++TNF+++ LT+L HPLLKAAAA +GA++ GGSSVVNISS+AG+T++
Sbjct: 87 AEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAV 170
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.120e-20 Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 4 ANAEFDGKLDILVNNVGTSIRKA-TVDYTPEEFAKVMDTNFNSLFLLTQ-----------------------LAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
A FDG LDILVNNVG SIRK+ T DYTPEEF ++DTNF+++ LT+ L HPLLKAAAA +GA+ GGSSVVNISS+AG+ ++
Sbjct: 101 AEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFHPLLKAAAAAEGARAKGGSSVVNISSIAGVIAV 207
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: A0A087G546_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087G546_ARAAL) HSP 1 Score: 87.4 bits (215), Expect = 4.350e-19 Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
+ +A F GKL+ILVNNVGT+IRK TVDY+ EE+AK+M TN S F L+QLAHPLLKA+ G SVV ISSVAGL +
Sbjct: 81 EVSAMFSGKLNILVNNVGTNIRKPTVDYSSEEYAKIMSTNLESAFHLSQLAHPLLKAS---------GVGSVVFISSVAGLVHV 155
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 8.290e-19 Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 16 FDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
F G LDILVNNVGTSIR+ATVDYT EE V+ NF+S F + QL HPLLK A GG SVVNI SVAG+TSI
Sbjct: 84 FGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEAQ--------GGGSVVNIGSVAGVTSI 154
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: UPI000A29A4C8 (tropinone reductase homolog At5g06060 isoform X2 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29A4C8) HSP 1 Score: 84.3 bits (207), Expect = 1.020e-18 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 1 QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGL 243
+A++ F GKL+ILVNNVGT++RK TV+Y+ EE+AK+M TN S F L+Q+AHPLLKA+ G S+V ISSVAGL
Sbjct: 81 EASSAFSGKLNILVNNVGTNVRKPTVEYSSEEYAKIMTTNLESAFHLSQIAHPLLKAS---------GVGSIVFISSVAGL 152
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: A0A7J8N572_9ROSI (Uncharacterized protein n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8N572_9ROSI) HSP 1 Score: 84.7 bits (208), Expect = 1.530e-18 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 16 FDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
F+GKL+ILVNNVGT+IRK TV+YT EE++K+M TNF S + QLAHPLLKA+ G S+V ISSVAGLT I
Sbjct: 27 FNGKLNILVNNVGTNIRKPTVEYTAEEYSKLMSTNFESSYHFCQLAHPLLKAS---------GKGSIVFISSVAGLTHI 96
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: V4SM77_CITCL (Uncharacterized protein n=1 Tax=Citrus clementina TaxID=85681 RepID=V4SM77_CITCL) HSP 1 Score: 84.7 bits (208), Expect = 1.560e-18 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
Q ++ FDGKL+IL+NNVGT+IRKATV+YT E+F+ +M TNF S + L QLAHPLLKA+ G +S+V +SSV G+ S+
Sbjct: 89 QVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKAS---------GAASIVLMSSVCGVVSV 163
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: V4SCC6_CITCL (Uncharacterized protein n=3 Tax=Citrus TaxID=2706 RepID=V4SCC6_CITCL) HSP 1 Score: 84.7 bits (208), Expect = 5.390e-18 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGLTSI 252
Q ++ FDGKL+IL+NNVGT+IRKATV+YT E+F+ +M TNF S + L QLAHPLLKA+ G +S+V +SSV G+ S+
Sbjct: 89 QVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKAS---------GAASIVLMSSVCGVVSV 163
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Match: TRNHF_ARATH (Tropinone reductase homolog At5g06060 n=9 Tax=Brassicaceae TaxID=3700 RepID=TRNHF_ARATH) HSP 1 Score: 84.3 bits (207), Expect = 6.690e-18 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 1 QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLAHPLLKAAAAVDGAQEAGGSSVVNISSVAGL 243
+A++ F GKL+IL+NNVGT++RK TV+Y+ EE+AK+M TN S F L+Q+AHPLLKA+ G S+V ISSVAGL
Sbjct: 81 EASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAHPLLKAS---------GVGSIVFISSVAGL 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102156.499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102156.499.1 >prot_H-fluviatilis_contig102156.499.1 ID=prot_H-fluviatilis_contig102156.499.1|Name=mRNA_H-fluviatilis_contig102156.499.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=84bp QANAEFDGKLDILVNNVGTSIRKATVDYTPEEFAKVMDTNFNSLFLLTQLback to top mRNA from alignment at H-fluviatilis_contig102156:324..816- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102156.499.1 ID=mRNA_H-fluviatilis_contig102156.499.1|Name=mRNA_H-fluviatilis_contig102156.499.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=493bp|location=Sequence derived from alignment at H-fluviatilis_contig102156:324..816- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102156:324..816- >mRNA_H-fluviatilis_contig102156.499.1 ID=mRNA_H-fluviatilis_contig102156.499.1|Name=mRNA_H-fluviatilis_contig102156.499.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=504bp|location=Sequence derived from alignment at H-fluviatilis_contig102156:324..816- (Heribaudiella fluviatilis SAG_13_90)back to top |