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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 610 |
| Cds size | 609 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929056.073872-CDS-H-fluviatilis_contig1021:5717..6209 | 1622929056.073872-CDS-H-fluviatilis_contig1021:5717..6209 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig1021 5718..6209 + |
| 1691135165.9288456-CDS-H-fluviatilis_contig1021:5717..6209 | 1691135165.9288456-CDS-H-fluviatilis_contig1021:5717..6209 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig1021 5718..6209 + |
| 1622929056.0995543-CDS-H-fluviatilis_contig1021:7437..7554 | 1622929056.0995543-CDS-H-fluviatilis_contig1021:7437..7554 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig1021 7438..7554 + |
| 1691135165.9377985-CDS-H-fluviatilis_contig1021:7437..7554 | 1691135165.9377985-CDS-H-fluviatilis_contig1021:7437..7554 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig1021 7438..7554 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig1021.483.1 >prot_H-fluviatilis_contig1021.483.1 ID=prot_H-fluviatilis_contig1021.483.1|Name=mRNA_H-fluviatilis_contig1021.483.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=203bp
GAGTVAHSFTPAGSMAGTDSDGGSQSRRMVSAALSPVRSPMRGKLRSQSA
HGIGATLITSGRSGDKKNGVGVNGAGPEKKSGERTKSSRSWGSFIGMGPT
FDMTHDGSGSGERSAGTDGVASAGRSGSGVVGSTNGGCVDGNEVEVQRGR
APPNSLNSPMAQIMGLFRVGSGGDVSVEGAASSEGAGASNGSQHAGISNV
PPP back to topmRNA from alignment at H-fluviatilis_contig1021:5718..7555+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig1021.483.1 ID=mRNA_H-fluviatilis_contig1021.483.1|Name=mRNA_H-fluviatilis_contig1021.483.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1838bp|location=Sequence derived from alignment at H-fluviatilis_contig1021:5718..7555+ (Heribaudiella fluviatilis SAG_13_90)
GGTGCCGGAACAGTCGCGCATTCTTTCACACCGGCGGGGTCGATGGCCGG
GACAGACTCTGACGGAGGATCCCAGTCGCGCCGCATGGTTTCCGCCGCGT
TGTCACCGGTGCGCTCGCCCATGCGAGGAAAGCTGCGCTCGCAGTCGGCG
CACGGAATCGGGGCTACGTTGATCACTTCCGGCAGATCGGGGGATAAGAA
GAACGGCGTCGGCGTGAACGGTGCAGGGCCGGAAAAGAAGTCCGGGGAAC
GGACGAAGTCCAGCAGGTCGTGGGGCTCCTTCATTGGCATGGGTCCGACC
TTCGATATGACTCATGATGGGAGCGGTAGCGGAGAAAGGTCGGCCGGTAC
CGATGGCGTCGCGAGTGCCGGCAGAAGTGGGAGCGGTGTCGTGGGAAGCA
CGAACGGCGGGTGTGTGGATGGGAATGAGGTCGAAGTGCAACGAGGTCGT
GCGCCGCCCAACTCTTTGAATTCGCCCATGGCGCAAATCATGGTAGGCCG
ATTGAGTTATGACCACCAACGGTTCTTGTGATCTTGGTTGTCGATGCATT
TCTAAATTAGGATGCGTGCATCAAAATGTGAAGGAATTTCACGCGATGAC
ATGTTTTCGTGTTGTGTTCAGCGCGTCTGCTGTCGTTGAGTCTAAGGTGT
TAGCTCCGAGCGTTTCTCGGGATACCCTGCCAACAACCATTGTATCGGGT
AAACCACCTCGGAGGGCGACGTTTACGACATTAAACATTTTTTCACACTC
ACGCATGTCATCCCTACACGGAGTGTCAATGTAGTGCCACACTTACGCAG
TGAACTTGGCGTATAGCTCTTCGCGCGTGCCACCACGCGGCGACCGTGAT
GATTTCTGCGGCAATTTGGGTTTGCCGCCTGTGCGACACAATTCGCGTGT
GTTCCGAGCTATCGGTGCGTTGAAGGCATCAGAAACGTCTCGAGGTGCAA
GCTCAGAATATTTTATACGTGGTAATCTCGCCTCGTGGAAGGAGTGCTGG
AACCATGGATATGACACCTAGTATCGTCCTGGCGAATCTGACAGCGGTGC
CTTGCTCAGAAATCGAGATTTGCGCGAGTAGCCCAGTTGAGCGTAGTAGT
CTCGACTTGTGGAAGGAATGCCAGAGCTAGGGATATTGCAGCTGGTATCG
TCCTGATGGATCTGATAAGGGTGCCATGCTCAGAAATCAAGATTGGCGCA
AGTAGCCCACTTCAGCGTCGTCGCTTGAGCGAGAAAGTCACCCTTAGAGA
CAAGATTGACTCAAACATAAGTCGTCGACGATGATCATTTTCGCTTGCGC
GTCACTTTGCTTTGGATGTCACGATAAGGTACCTCGATGTTGGTGATTAT
GTCACTGCGCGATACGGACGGGCTTGGTCACTCTCTCAGTAGTCCCACAG
GTGGCGCCCATGTTTGCAACACAGCAGATCCGCAATTCACATCATCCAGC
AACGCCAGCTTGCCCCGCGCCGTCCTCCCTCCTCCACGGGCGTTGAAAGG
GGTGTTCTTATCAGAGTTACTTTCTTTGTTTTGTCACAGATTGTCGGGGT
TGCGGTCTGCTGCGCAAAACGTCGCGAAATCTTAAGTTGTGCAAGCTTGG
AGTCCACAACCTGTAGTTTTTTCAGATGTGCAATCTGCAGTCTGCAACAA
GAGATGTCTGCCAACAACTCCCATTGACATCGATCGCAAACCGCCCGCGC
CATTTTCCTTATGCTTGCAGGGGCTGTTTAGAGTGGGTTCGGGTGGGGAT
GTTAGCGTCGAAGGCGCGGCCTCTAGCGAGGGCGCAGGCGCGAGCAATGG
ATCGCAACACGCCGGTATTAGCAACGTACCTCCTCCGG back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig1021:5718..7555+ >mRNA_H-fluviatilis_contig1021.483.1 ID=mRNA_H-fluviatilis_contig1021.483.1|Name=mRNA_H-fluviatilis_contig1021.483.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1218bp|location=Sequence derived from alignment at H-fluviatilis_contig1021:5718..7555+ (Heribaudiella fluviatilis SAG_13_90)
GGTGCCGGAACAGTCGCGCATTCTTTCACACCGGCGGGGTCGATGGCCGG
GACAGACTCTGACGGAGGATCCCAGTCGCGCCGCATGGTTTCCGCCGCGT
TGTCACCGGTGCGCTCGCCCATGCGAGGAAAGCTGCGCTCGCAGTCGGCG
CACGGAATCGGGGCTACGTTGATCACTTCCGGCAGATCGGGGGATAAGAA
GAACGGCGTCGGCGTGAACGGTGCAGGGCCGGAAAAGAAGTCCGGGGAAC
GGACGAAGTCCAGCAGGTCGTGGGGCTCCTTCATTGGCATGGGTCCGACC
TTCGATATGACTCATGATGGGAGCGGTAGCGGAGAAAGGTCGGCCGGTAC
CGATGGCGTCGCGAGTGCCGGCAGAAGTGGGAGCGGTGTCGTGGGAAGCA
CGAACGGCGGGTGTGTGGATGGGAATGAGGTCGAAGTGCAACGAGGTCGT
GCGCCGCCCAACTCTTTGAATTCGCCCATGGCGCAAATCATGGGTGCCGG
AACAGTCGCGCATTCTTTCACACCGGCGGGGTCGATGGCCGGGACAGACT
CTGACGGAGGATCCCAGTCGCGCCGCATGGTTTCCGCCGCGTTGTCACCG
GTGCGCTCGCCCATGCGAGGAAAGCTGCGCTCGCAGTCGGCGCACGGAAT
CGGGGCTACGTTGATCACTTCCGGCAGATCGGGGGATAAGAAGAACGGCG
TCGGCGTGAACGGTGCAGGGCCGGAAAAGAAGTCCGGGGAACGGACGAAG
TCCAGCAGGTCGTGGGGCTCCTTCATTGGCATGGGTCCGACCTTCGATAT
GACTCATGATGGGAGCGGTAGCGGAGAAAGGTCGGCCGGTACCGATGGCG
TCGCGAGTGCCGGCAGAAGTGGGAGCGGTGTCGTGGGAAGCACGAACGGC
GGGTGTGTGGATGGGAATGAGGTCGAAGTGCAACGAGGTCGTGCGCCGCC
CAACTCTTTGAATTCGCCCATGGCGCAAATCATGGGGCTGTTTAGAGTGG
GTTCGGGTGGGGATGTTAGCGTCGAAGGCGCGGCCTCTAGCGAGGGCGCA
GGCGCGAGCAATGGATCGCAACACGCCGGTATTAGCAACGTACCTCCTCC
GGGGCTGTTTAGAGTGGGTTCGGGTGGGGATGTTAGCGTCGAAGGCGCGG
CCTCTAGCGAGGGCGCAGGCGCGAGCAATGGATCGCAACACGCCGGTATT
AGCAACGTACCTCCTCCG back to top
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