mRNA_H-fluviatilis_contig102.463.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 124 bits (310), Expect = 1.580e-31 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 493 QKVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
Q+VL TLQ LG GNCFDD+ QLS MS+ + AATFHKFCK F +EL+E+HI+LPTG+ Q+ + Y KLG TGAIGSTDVTH+ W C
Sbjct: 2 QQVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMC 88
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 124 bits (310), Expect = 1.490e-30 Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 493 QKVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
Q+VL LQILG GNCFDD+ QLS MS+ + AATFHKFCK F +EL+E+HI+LPTG+ Q+ + Y KLG TGAIGSTDVTH+ W C
Sbjct: 2 QQVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMC 88
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.180e-29 Identity = 66/147 (44.90%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 319 QWSSRYACMRFRVRG*RL*NRGEEPVCA*WHCIRWDTQKLPLFRRCGQAR--RLHCEHPAQKVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
+W +Y C R R E W +L F+ G R + + K+L LQILG GNCFDD+ QLS MS+ + AATFHKFCK F +EL+E+HI+LPTG+ Q+ + Y KLG TGAIGSTDVTH+ W C
Sbjct: 205 RWHRKYCCRRPTAR---------EKRRTLWF-------RLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMC 335
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5KGJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ6_9PHAE) HSP 1 Score: 105 bits (261), Expect = 7.010e-25 Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 3
Query: 12 MAEWAVVLELLEEDDSMNGGQGDGDAARVKRTRRVYPRADSSAAPWSLML-KNDLSDHTSRDARVFRRRFRVPYVFFKQVVKLVKDTKWFASVEEDVAGRSCIPVELKVCMY 344
++ W VVL + D + +G G + VKRTRRV PR D A+ W ML + L + SR+A++FRRRFR+PY FF ++++LVK KWF ++DVAGR CIPVELKV +
Sbjct: 25 VSTWRVVLRSFPDGDELED-EGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPVSREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRKKDVAGRMCIPVELKVMYF 135
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5KL26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL26_9PHAE) HSP 1 Score: 104 bits (259), Expect = 1.940e-24 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 9 TMAEWAVVLELLEEDDSMNGGQGDGDAARVKRTRRVYPRADSSAAPWSLML-KNDLSDHTSRDARVFRRRFRVPYVFFKQVVKLVKDTKWFASVEEDVAGRSCIPVEL 329
T++ W VVL +DD + +G G VKR RRV PR D A+ W ML + L + SR+ ++FRRRFR+PY FF ++V+LVK+ KWF ++DVAGR CIPVEL
Sbjct: 40 TVSAWRVVLRSFPDDDELED-EGLGGGPPVKRARRVLPRPDYRASFWWRMLGETGLKEPASREGKLFRRRFRIPYQFFTELVELVKEKKWFPMRKQDVAGRMCIPVEL 146
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 103 bits (256), Expect = 5.610e-23 Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 484 HPAQ-KVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQET--AVEQYHKLGFTGAIGSTDVTHLRWDRC 753
HP + KVLA L ILG GNCF + Q+S+MS A A FHKFCK F E+Y++HI+LP+ E ++QY +LGF+GA+GS DVTH+ W +C
Sbjct: 120 HPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKC 212
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.750e-23 Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 514 QILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
Q+LG GNCFDDV QLS MS+++ TFHKFC+ F E++++HI+LPTG + + +H+LG+TGA GSTDVTH+ W+ C
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMC 121
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.450e-22 Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 496 KVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
KVLA LQIL GNCF D+ +S++S AATFH+F + F E+Y +HIFLPTG Q+ + QY +LGF+GA GSTDVTH+ W C
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMC 243
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5KPT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT7_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 7.050e-22 Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 3
Query: 9 TMAEWAVVLELLEEDDSMNGGQGDGDAARVKRTRRVYPRADSSAAPWSLML-KNDLSDHTSRDARVFRRRFRVPYVFFKQVVKLVKDTKWFASVEEDVAGRSCIPVELKVCMY 344
T+A W VVL + D + +G G + VKRTRRV PR D A+ W ML + L + SR+ ++FR RFR+PY F ++++LVK K F ++DVAGR CIPVELKV Y
Sbjct: 40 TVATWRVVLRSFPDGDELED-EGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPASREVKLFRGRFRIPYQFLTELMELVKKKKRFPMRKKDVAGRMCIPVELKVMYY 151
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.010e-21 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 1
Query: 487 PAQKVLATLQILGGGNCFDDVSQLSYMSEAITAATFHKFCKPFDEELYEKHIFLPTGAAQETAVEQYHKLGFTGAIGSTDVTHLRWDRC 753
P +VLA LQIL GN F D+ +S++S A+TFH+FCK F ELY+++++LPTG +EQY ++GF GA+GSTDVTH+ W C
Sbjct: 80 PHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMC 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig102.463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig102.463.1 >prot_H-fluviatilis_contig102.463.1 ID=prot_H-fluviatilis_contig102.463.1|Name=mRNA_H-fluviatilis_contig102.463.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=147bp MAEWAVVLELLEEDDSMNGGQGDGDAARVKRTRRVYPRADSSAAPWSLMLback to top mRNA from alignment at H-fluviatilis_contig102:63383..64821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig102.463.1 ID=mRNA_H-fluviatilis_contig102.463.1|Name=mRNA_H-fluviatilis_contig102.463.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1439bp|location=Sequence derived from alignment at H-fluviatilis_contig102:63383..64821+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig102:63383..64821+ >mRNA_H-fluviatilis_contig102.463.1 ID=mRNA_H-fluviatilis_contig102.463.1|Name=mRNA_H-fluviatilis_contig102.463.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=882bp|location=Sequence derived from alignment at H-fluviatilis_contig102:63383..64821+ (Heribaudiella fluviatilis SAG_13_90)back to top |