mRNA_H-fluviatilis_contig10194.447.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 431 bits (1107), Expect = 2.550e-128 Identity = 254/615 (41.30%), Postives = 345/615 (56.10%), Query Frame = 3
Query: 3831 MQAANWMRTSLINMATMTAPIREPLEELLKGT-RKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKE--ALLL*ARSGVWSVSCGV-----------AFLSTAIIGIWRILSVRR--RW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATP-FETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEG-HVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALNAAYRRRMTTSLYKLMFGRETLFEYAALVEGEVNDWQAESLSATRMHDLVTGLVAEKERLRTEVLDRVQSNREQMIVQ 5618
+ A NW+RTSL M+ + AP+RE LE + G +T+R+A+++ I +AWT +W+ A + NA+ L HP G VLMFPDASD WGSF+T+VP++++ + V V+ M HEPLGFLSG F G QLRW TVDKE A++ R + + GV F A I + +R W A D+ +SG + G LL SRW V ++ R+ A++ + +LPSKN I+E Q +VG A T PD EGL+R + G+ LW+P A+ RLM+CAHMK GHRG AT LR YC W++M+ DV FV+QCLHCMD+K+G +VP P G VH + G VLHFD+LH+G GPLG +G S+ YLL + DDLS + WMEP CTA +T + LL WC +GVP VWV TA+ FKN + + + LG R F VANS +NGT ER+MR I+RT +AVL E RR V WV++VP VQWALN AYR R ++ Y +MFGR ++ L W ++L AT++ V ++ + L +V +V NR + Q
Sbjct: 117 ISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVL---GQYDYTIQHISGERNC-------WGDLL----SRWVNVPAVSN---------RSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAQ 708
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 3.480e-124 Identity = 267/645 (41.40%), Postives = 362/645 (56.12%), Query Frame = 3
Query: 3723 GVVEFARARECSTHGSASRDLRRCAGRKRGGELLKFMQAANWMRTSLINMATMTAPIREPLEELLKGT-RKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKE--ALLL*ARSGVWSVSCGV-----------AFLSTAIIGIWRILSVRR--RW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATP-FETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEG-HVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALNAAYRRRMTTSLYKLMFGRETLFEYAALVEGEVNDWQAESLSATRMHDLVTGLVAEKERLRTEVLDRVQSNR 5600
GV+E R R S +LRR + GEL++F+QA NW+RTSL M+ + AP+RE LE + G +T+R+A+++ I +AWT +W+ A + NA+ L HP G VLMFPDASD WGSF+T+VP++++ + V V+ M HEPLGFLSG F G QLRW TVDKE A++ R + + GV F A I + +R W A D+ +SG + G LL SRW V ++ R+ A++ + +LPSKN I+E Q +VG A T PD EGL+R + G+ LW+P A+ RLM+CAHMK GHRG AT LR YC W++M+ DV FV+QCLHCMD+K+G +VP P G VH + G VLHFD+LH+G GPLG +G S+ YLL + DDLS + WMEP CTA +T + LL WC +GVP VWV TA+ FKN + + + LG R F VANS +NGT ER+MR I+RT +AVL E RR V WV++VP VQWALN AYR R ++ Y +MFGR ++ L W ++L AT++ V ++ + L +V +V NR
Sbjct: 865 GVIEHDRDRL-----SGLANLRRP---ETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVL---GQYDYTIQHISGERNC-------WGDLL----SRWVNVPAVSN---------RSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNR 1478
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 426 bits (1096), Expect = 1.080e-118 Identity = 253/617 (41.00%), Postives = 341/617 (55.27%), Query Frame = 3
Query: 3813 GELLKFMQAANWMRTSLINMATMTAPIREPLEELLKGTR-KTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQL-RWPTVDKEAL-----------LL*ARSGVWSVSCGVAFLSTAIIGIWRILSVRRRW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGC----AQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEG-HVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALNAAYRRRMTTSLYKLMFGRETLFEYAALVEGEVNDWQAESLSATRMHDLVTGLVAEKERLRTEVLDRVQSNREQ 5606
GEL++F+QA NW+RTSL MA + P+R LE+ L G + +T+R+A ++ I +A T AW AA + A+ L+HP G VLMFPDASD WGSFLT+VP+ L GV V+ M HEP+GFLSG F G Q RW TVDKE LL +++ +A++ + + Q D VL G R G G SRW V + VR A+YA ++ +++PSK +++ Q A +G A + +T TA D+EGL+R G+ LW+P A A RLMVCAHMK GHRG VAT + L YC W ME V FVKQCLHCMD+KAG VP PLG VH G V+HFD+L++G GPLG +G E KY+L + DD+S + W+EP ACTA +T + LL WC +GVP VWV TAS FKN + + LG R+F VANS +NGT ER+MR ++RT +A++ E R WV++VP VQWALN A+R R ++ Y +MFGR + L +W+ + L + V +V + L EVLD+VQ++R +
Sbjct: 985 GELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTA---------QRLDQWKAVL-GQYDYTIRHISGERNCWGDLLSRWVSVPS---------VSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSK 1582
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 238 bits (607), Expect = 4.860e-65 Identity = 117/255 (45.88%), Postives = 159/255 (62.35%), Query Frame = 3
Query: 4842 MEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEG-HVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALNAAYRRRMTTSLYKLMFGRETLFEYAALVEGEVNDWQAESLSATRMHDLVTGLVAEKERLRTEVLDRVQSNR 5600
M+ DV FV+QCLHCMD+K+G +VP P G VH + G VLHFD+LH+G GPLG +G S+ YLL + DDLS + WMEP CTA +T + LL WC +GVP VWV TA+ FKN + + + LG R F VANS +NGT ER+MR ++RT +AVL E RR + WV++VP VQWALN AYR R ++ Y +MFGR ++ L W ++L AT++ V ++ + L ++ +V NR
Sbjct: 1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNR 255
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A485L4U4_9STRA (Aste57867_16160 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485L4U4_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.650e-48 Identity = 156/546 (28.57%), Postives = 233/546 (42.67%), Query Frame = 3
Query: 3810 GGELLKFMQAANWMRTSLINMATMTAPIREPLEELL--KGTRKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEAL-----------LL*ARSG--VWSVSCGVAFL--STAIIGIWRILSVRR--RW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
G +L +++ A NWMR S+ + P+ E LE + G ++T++ AAS ++ + W++ L N + L HP ++ +F DAS+ WGS +T+VP L + H+PL FLSG F+G RW V+KEA LL +G +++ + F+ TA++ + ++ RW +L S PG + SRW + ++ + + + D P+ I E Q+ V A + + G +R +WVP A RL VCAH GHR AT L +C W M+ DV FV++CLHC A G P PLG +H G++H+DF+ +G +KYLL + D S W+ PA TA LL+W A GV WV + FKN+ I + LG HF A NGTVE +MR ++R + A L+E R W E ++ LN
Sbjct: 244 GADLQQYVCAINWMRMSIPGYNVLVQPLTELLERVFAASGGKRTKQAAASVLLADVGWSDVHVECLAKTKAVLGNVVELCHPDPLQRICVFADASEGHWGSVITQVPPDQLQRPFDAQN--HQPLMFLSGTFTGAAGRWAIVEKEAYAIVETLVRADYLLHPAAGFNLYTDHRNLKFIFSPTAVVASVPKYTAQKLERW--------------ALLLMGYSYVIHDIPGEVNVWADLLSRW-----GSTLPSICAIKQQPLLISPLRDDKFVWPTFVSIAEAQVAVPDDVLSGMAKSKDAAHLVVLASGQSWFLRLVDDVIWVPAAAAELQLRLCVCAHASLAGHRTATATLSSLESFCQWIGMKDDVEFFVRRCLHCASASGG--APRPLGEALHSTVPNGLIHWDFVFMGAS---------KTGDKYLLVVKCDASKMVWLFPAPEATATFVKDCLLQWFAVFGVCYEWVSDQGTHFKNQVIAELQHVLGAHHHFTTARCPWANGTVEVVMRQLLRLFRACLSEWRMAPNQWPEAHLVIMLVLN 757
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6G0WUQ0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUQ0_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.930e-45 Identity = 152/532 (28.57%), Postives = 242/532 (45.49%), Query Frame = 3
Query: 3816 ELLKFMQAANWMRTSLINMATMTAPIREPLEELLKGTRKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAM----GLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEALLL*A---RSGVWSVSCGVAFLSTAIIGIWRILSVRRRW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
+L +F+ A NWMR S+ + AP+R+ L++ K ++I ++V + T W + A LK+A+ LAHP+ V ++ DAS+ +WG+ T+VP DL + ++ H+PL FLSGAF+G RWP V+KEA + R + L T + I + + R + H ++ + PG + G SRW A + +V ++ V + A P+ I + Q AI+ P + + + L+ + +W+P A R+ + H GHR AT + + WA+++ADV AFV+ C+HC+ G +VP PLG+ +H E ++HFD+L + P T G + +L + DD+SG+ + P+ A T LL W G WV + S FKN I + + G HF A NGTVE + R I+R + + +E + T W V+ +VQ ALN
Sbjct: 880 DLQQFVCATNWMRASIPCYTELVAPLRQLLDQATKKIGSAKKIKLARV---QLSTVGWDNSHMACFNRLKDALLAMVPLAHPRADMMVCLYTDASEGFWGAIATQVPYDDLS--LPLEDQRHQPLAFLSGAFTGASERWPIVEKEAFAVVESCKRLDYILIRPAGFRLFTDHKNLQYIFNPAGQSPNMARYQAHKLERWALVLSSFPYTIECLPGEDNVWGDLLSRWG-ASTQAPAPTAAVRQLLAV-VSPLQQADFDWPTTATIVKTQRSAIEG-----GENPPPDVTWNEDKNLHL---DKEDRIWIPPTATDLQQRICIIVHQGTAGHRRIEATTKAVSDIFTWATLDADVKAFVQACIHCLSVD-GAIVPRPLGSALHAEKPQELIHFDWLSM----PTATNGW-----QKILVIKDDMSGFVRLWPSETSDATATANGLLDWFTTFGYVHTWVSDSGSHFKNEVIDKLRKAAGAHHHFATAYCPWANGTVEVVNRLILRVVKTLTSELKLRSTDWHLVLALVQGALN 1386
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A6A4CIS0_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CIS0_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.460e-44 Identity = 195/741 (26.32%), Postives = 286/741 (38.60%), Query Frame = 3
Query: 3306 NQQIESVPWSQLRLEKAAGLHGGASCLASFDILQGVWQ----------CRWMLPRARHLPW*RRRGFYPACCAARSAEPDAAFFKQAWSLRCWLA*FFGYVWCGRMTSLFADARRRSRW*TWGRCSSGSL*REYSPWHTR*PFS*FP*NGVVEFARAREC----STHGSASRDLRRCAGRKRG----------GELLKFMQAANWMRTSLINMATMTAPIREPLEELLK--GTRKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEA------------LLL*ARSGVWSV-----SCGVAFLSTAIIGIWRILSVRR--RW*ARCRRRQHNDFCTGVLSGANSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYA-CADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
N + E + W LE A GL G SC + D +G WQ C M R P G A + + + WL GY +L R C S L + P AR C S HG ++ C R G G+L +FM A NWMR ++ + + AP+ E ++ K G+RK +++ ++ + W ++ A +L + LAHP V +F DAS +W + T+ ++L + H PL FLSG F+G QLRWPT++KEA LLL R G + + + F +A G + + RW + + N+ D SRW SV ++ V + D P+ ++I+ Q + Q P + + + A +W+P + R+ V AH GHRG T + +C W S+ DV FV+ C+HC+ + GR P P GA +H VLHFD+L L P H KY+L + DD SG+ + P A A LL W GV WV + FKN+ + +A LG + HF A NGTVE + R +++ AVL+E R + W V+ +VQ ALN
Sbjct: 33 NDRTEPIQWPMPMLESALGLLEGTSCYFTLDWFRGYWQLPLHKDSQEMCSIMTHRGIITPTRVLMGGTDAVAYCQHVVEEVFRPILYHGVLAWLDDILGYA--ADPVNLLEVLER-----VLAACRSFGL--KLHPAKC--------------LREARWCGKIVSGHG-----IKHCPSRIEGLVSMPDPTNAGQLQQFMCAVNWMRQNIARYSELAAPLLEIVDAAAKRVGSRKMKQMCRV-LLSDLGWNQKHVEALKVIRSSLLAMVPLAHPDPSKAVALFTDASQDFWSAVCTQDEESELEKPFDKQN--HRPLAFLSGRFTGAQLRWPTIEKEAYAIVESVKRLEYLLL--RPGGFHLFTDHRNLAYIFNPSATDGSMQRYQADKLQRW--AMAMTSYRYVIEHIRGDDNAWAD------------MLSRWGNPQASRIEAASSVKQIAVVPQLSPLEDEAFEWPTIDEIRNAQQQ--------QQQTRPEGVSWSEERSCFV---ADGDRVWIPENCDISQ-RICVVAHAGRSGHRGERTTTASVAAWCWWPSLVDDVVQFVRSCIHCVATRDGR-EPRPYGAAIHATKPNEVLHFDYLTL----PEDENSH----NKYVLVVKDDFSGFVELYPTAEPDARTCATSLLAWFHRYGVVWQWVSDQGTHFKNQVVHELAMKLGANHHFTTAYCPWANGTVEVVNRLLLKCIRAVLSERRLSPSKWETVLGMVQAALN 705
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: H3GMM3_PHYRM (RNA-directed DNA polymerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMM3_PHYRM) HSP 1 Score: 185 bits (469), Expect = 4.770e-43 Identity = 154/546 (28.21%), Postives = 239/546 (43.77%), Query Frame = 3
Query: 3813 GELLKFMQAANWMRTSLINMATMTAPIREPLEELLKGTRKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEALLL*ARSGVWSVSCG-VAFLSTAIIGIWRILSVRRRW*ARCRRRQHNDFCTG-VLSGANSIRDRAH-----PGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRT-------------VAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
GEL +F+ A NWMR SLI+ A +P++ L+E L TR+T+R AA + +A + AA+D L +A L P +F DASD+ W +T+V D+ V V+ H + +SG F+G QL W ++KEA + +++C + +L G R G +L + + + + G + SRW G+ ++ R+RT +A +S+L +D + + Q+ + P AE ++G+ +WVP +AK RL V AH QGHRG A E LR + V+ FV QC C+ +K G ++P P G + GVLHFDFL++G KY+L L D S Y + A + +TV LL W A G+P +W+ S FKN + ++ L T + F A NG++ER+ R I++ ++ E + W +VP+VQ +LN
Sbjct: 850 GELQQFICAINWMRESLIDYARQVSPLQRKLDEALANTRRTKRAAAGISVQLDAAEK---AAFDNVKNMLASAATLDFPDDTATTCLFTDASDVGWALIVTQVKDFDIK--VPVQDQQHHLIECMSGTFTGSQLNWTVIEKEAFPI-------ALACDKLDYLLLRPQGFRMFCDHRNLIHVFAPDESIKKHVKGKLLRWSMKLMNYTYIIEHIAGPQNVWADMISRWA---GNHSPVATTIKRIRTDTPATPSAAVRPELATEDTGPIISTLRPLDD-DHFVWPTFEDISMVQSTSDPPTRAERTTDGVLML----NNRIWVPAEAKDLIQRLFVIAHCGAQGHRGGAAMVEHLRRLFAIEHLTTLVSTFVGQCRLCLHSKGGSIIPRPWGETIECSERNGVLHFDFLYMG---------ESFGDSKYILVLKDHASHYCELVVADTADSAVTVEALLAWHARFGLPPIWISDQGSHFKNEVVTELSRRLRTQQQFTPAYCPWINGSIERVNRDILQVIRTMILEYKVHYNDWTYLVPMVQSSLN 1366
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.680e-42 Identity = 155/536 (28.92%), Postives = 226/536 (42.16%), Query Frame = 3
Query: 3810 GGELLKFMQAANWMRTSLINMATMTAPIREPLEELLK--GTRK---TRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEALLL*ARSGVWSVSCGVAFLSTAIIGIWRILSVRRRW*ARCRRRQHNDFCTGVLSGA--NSIRDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEK-QLEAIKAVGCAQAIATPFETAEPDSE-GLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
G EL +F+ A NWMR SL +T P+ +E++ G RK RRI V+ E W+E A L++A+ LAHP ++ +F DASD WG+ +T+VP L HEPL LSG FSG RW V+KEA + +C A + + + R F +S A D+ H L+ T + G+A+ + R + A ++S+P+ + + Q ++ + Q AT P E G+ +R K +W+P DA R+ + H GHR T + + VW+ + +DV FV +CLHC G P PLG +H E +LH+D+L +G ++ EKY+L L DD S Y W+ WV + FKN I+ + LG HF A NGTVE +MR ++R A+L+E R W V+ IVQ LN
Sbjct: 800 GQELQQFICALNWMRMSLPAFNKLTGPLSSFMEKVYAAAGGRKKSMVRRI----VLGEVGWSEVEMVALQGCKDALEHALMLAHPDPNKRLCVFTDASDEHWGAAITQVPHDHLTR--DFVDQHHEPLMMLSGTFSGGAKRWAIVEKEAYAI-------VETCKRADYLVRRPDGFSLYTDHRNL--------RYIFAPTTVSSAVPKYTADKLHRWALLLMS-LTYEIHDITGEANVWADLLSRWGSTFTTVAAIRLTSIPASPQLDDSFQWPTLEQIMDVQRAATDV---PPGLEAGVDHLLRDSKDRVWLPADASELQLRICIVGHFGAAGHRTAEVTLKNIASVFVWSDLVSDVKQFVARCLHCASVSGGPPFPRPLGEALHAERPNELLHWDYLSMGDS---------TKGEKYVLVLKDDASNYVWL---------------------------WVSDQGTHFKNAVIQALQRALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKIVQLVLN 1274
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Match: H3H4D4_PHYRM (RNA-directed DNA polymerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4D4_PHYRM) HSP 1 Score: 181 bits (460), Expect = 4.630e-42 Identity = 152/541 (28.10%), Postives = 238/541 (43.99%), Query Frame = 3
Query: 3813 GELLKFMQAANWMRTSLINMATMTAPIREPLEELLKGTRKTRRIAASKVIHEEAWTEQWQAAWDAALRTLKNAMGLAHPKKGWKVLMFPDASDLWWGSFLTEVPRADLMSGVQVKGMCHEPLGFLSGAFSGLQLRWPTVDKEAL----------LL*ARSGVWSVSCGVAFLSTAIIGIWRILSVRR----RW*ARCRRRQHNDFCTGVLSGANSI-RDRAHPGRGKLLG*FTSRWQRVDGDADSEEFSVMRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPDSEGLYRAVRAGKAELWVPVDAKAPHARLMVCAHMKGQGHRGTVATFEVLRPYCVWASMEADVAAFVKQCLHCMDAKAGRLVPSPLGAVVHPECVGGVLHFDFLHLGIGGPLGTEGHVSESEKYLLGLADDLSGYTWMEPAAACTAEITVRLLLRWCAAMGVPRVWVRGTASQFKNRTIRLVAETLGTSRHFEVANSA-TNGTVERLMR*IIRTYEAVLNEARRPVTGWVEVVPIVQWALN 5387
GEL +F+ A NWMR SLI+ A +P++ L+E L TR+T+R+AA +I A +AA+D L +A LA P + DASD+ W +T+V D+ VQ + H+ + LSG F+G QL W ++KEA L R + + C L + + RW + + ++ ++G N++ D G + TSR R+ D + S + +A +S+L +D ++ + P D + V + +W+P +A RL + AH QGHRG A E LR + + FV+QC C+ +K G ++P P G + GVLHFDFL +G KY+L L D S + + A + +TV L W + G+P VW+ S FKN + ++ L T + F A NG+VER+ R I++ ++ E + + WV +VP+VQ +LN
Sbjct: 638 GELQQFLCAINWMRESLIDYARQVSPLQHRLDEALAKTRRTKRVAAGILIELSAAE---RAAFDNVKDMLASAATLAFPNDSATTCLLTDASDIGWAVIVTQVKDFDIKMPVQDQQ--HQLVECLSGTFTGSQLNWTVIEKEAFPIALACDKLDYLLLRPQGFRMFCDHRNLIHVFAPDENVKKHVKGKLLRWSMKL---MNYNYVIEHIAGPNNVWADMISRWAGNHVP-VTSRISRIRTDTPAAP-SAASQQELAREVTGPIISTLRPLDDDNFIWPTFVEIILVQSRYEPPSGAVRTDDD-----VFTLRDRIWIPTEASDLILRLFIIAHCGAQGHRGHAAMVEHLRRLFAIEKLNTLASTFVRQCRLCLHSKGGNIIPRPWGETIDCCERNGVLHFDFLFMG---------ESFGDSKYILVLKDHASHFCELVVADTADSTVTVEAFLAWHSRFGLPPVWISDQGSHFKNEVVSELSRRLRTQQQFTPAYCPWINGSVERVNRDILQVIRTMILEYKINHSDWVYLVPMVQSSLN 1154 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10194.447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10194.447.1 >prot_H-fluviatilis_contig10194.447.1 ID=prot_H-fluviatilis_contig10194.447.1|Name=mRNA_H-fluviatilis_contig10194.447.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=259bp MRVRTVAMYACADAVSSLPSKNDIKEKQLEAIKAVGCAQAIATPFETAEPback to top mRNA from alignment at H-fluviatilis_contig10194:2275..8116+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10194.447.1 ID=mRNA_H-fluviatilis_contig10194.447.1|Name=mRNA_H-fluviatilis_contig10194.447.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5842bp|location=Sequence derived from alignment at H-fluviatilis_contig10194:2275..8116+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10194:2275..8116+ >mRNA_H-fluviatilis_contig10194.447.1 ID=mRNA_H-fluviatilis_contig10194.447.1|Name=mRNA_H-fluviatilis_contig10194.447.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1554bp|location=Sequence derived from alignment at H-fluviatilis_contig10194:2275..8116+ (Heribaudiella fluviatilis SAG_13_90)back to top |