mRNA_H-fluviatilis_contig10189.441.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 2.490e-133 Identity = 217/285 (76.14%), Postives = 242/285 (84.91%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTYRTPSEEAE--ASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGRGYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMSGTEEP 849
M+CLVRGMQFAL NI CYTYR P E + A SG EA GG+ GD GP P D+LRN+RMRE+ EV K EY++KV RSI +E ++ AYPA+VVS+GSGVSIIKVDGPA F+RVSGSSIGGGTYWGLC+LLT+A +YDESL MA +GNSD VDMLVGDIYGRGYSKFQLSSNTLASSFGK+GGMEAP PGSGVS EDL ++LLVMI++NIGQVAYLNAKL NTRRIYFVGNFLRHN L+ QLAFAIDYWSSGEMEALFLEHEGY GALG+FLMSGTEEP
Sbjct: 244 MECLVRGMQFALANIPEACYTYRPPVEVKKEGAPSGGEAEEG-GGSGGDEPGPDPRDNLRNKRMREMAEVSAKREYTVKVGRSIADEPATTAYPALVVSLGSGVSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTEATSYDESLDMARQGNSDKVDMLVGDIYGRGYSKFQLSSNTLASSFGKVGGMEAPGKPGSGVSEEDLVQSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEP 527
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA) HSP 1 Score: 333 bits (855), Expect = 5.410e-101 Identity = 179/293 (61.09%), Postives = 217/293 (74.06%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTYRT-PSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGRGYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMSGTEEPAEDANDDEK 876
M LVRG+QF + NI ECY + P + A+ E P S D+ RN RMR ++E+ K++YS KV RS S YPA+VVS+GSGVSI+KVDGPA FERVSGSSIGGGTYWGLC+LLT A +YD+SL +A +G SD VDMLVGDIYG GY+KFQLSSNTLASSFGK+ E PR GV+ ED++KAL+VM+++NIGQVAYLNAKL++TRRIYFVGNFLRHN+++ +LA+AI YWS GEMEALF EHEGYLGALGAFL SG E+P D + DE+
Sbjct: 227 MASLVRGLQFCIANIPGECYAFEPEPVKGTGANGKGEEEPMA----------SEQDTFRNMRMRHMSELREKVDYSHKVHRSRTELLQS--YPALVVSIGSGVSILKVDGPAKFERVSGSSIGGGTYWGLCRLLTGATDYDDSLDLADQGESDRVDMLVGDIYGHGYNKFQLSSNTLASSFGKLVTKEDPR---EGVTNEDVSKALIVMVTMNIGQVAYLNAKLYDTRRIYFVGNFLRHNNISAQRLAYAIAYWSGGEMEALFFEHEGYLGALGAFLSSGYEDP--DGSSDEE 502
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A7S0GF81_9STRA (Hypothetical protein n=4 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF81_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.110e-73 Identity = 149/306 (48.69%), Postives = 196/306 (64.05%), Query Frame = 1
Query: 7 CLVRGMQFALVNIQSECYTYR-------------------------TPSEEAEASSGAEAGPAVG--GTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYG---RGYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMS 834
CLV GMQF L ++ ECYT++ P E + ASS + G G+E V +P + R++ M + + +S KV R + SS YP ++V++G+GVSI++VDGP +ER+SGSSIGGGTYWGLC+LLT +++ L +ASRGN DM+VGDIYG SK L SN +ASSFGK+ A + P SG+ EDLA+ALL+MI+ NIGQVAYLNA+L NT RIYFVGNFLRHN +++ +L+++I YWS GEMEALFLEHEGY GALGAFL++
Sbjct: 44 CLVVGMQFVLSDVIGECYTFKPCIGGMVDSSHLNRSRKTNSNNNDTVPEEASAASSDCNSVSDSGSIGSESSVFLDAPSTARRSKSMASKVD---EWWWSRKVKRDMVVPDSS-TYPYLLVTIGTGVSILRVDGPRQYERISGSSIGGGTYWGLCRLLTDVEKFEDVLDLASRGNPTKCDMMVGDIYGDNPEALSKLGLPSNIVASSFGKL---VAKQDPASGLKQEDLARALLLMITNNIGQVAYLNAQLHNTSRIYFVGNFLRHNKMSQRRLSYSIHYWSKGEMEALFLEHEGYFGALGAFLLN 342
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A7S2XPQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPQ7_9STRA) HSP 1 Score: 246 bits (629), Expect = 8.590e-71 Identity = 136/285 (47.72%), Postives = 187/285 (65.61%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTY----RTPSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGRG---YSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMS 834
M LV GMQF + ++ ECYT+ R+ E+ + G + + + DS + G + ++ KV R + T + YP ++V++G+GVSI++VDGP ER+SGS+IGGGTYWGLC+LLT ++++ L +A RG+ VDM+VGDIYG K L S+ +ASSFGK+ A + P SG+ EDLA+ALL+M+++NIGQV+YLNA+L T RIYFVGNFLRHN +++ +LAFAIDYWS G+MEALFLEHEG GALGAFL+S
Sbjct: 2 MDSLVAGMQFVMADVVGECYTFKPKLRSDDEKKDTPHGTDHSDS---SRCSTPKSKSADSEEGSAPKGNKPKGDEWWWTRKVQRDVI--TDAVTYPYLLVTIGTGVSILRVDGPRKHERISGSTIGGGTYWGLCRLLTDVEDFEDVLNLAERGDPSKVDMMVGDIYGENSDALEKLGLPSHIVASSFGKL---VAKQDPASGIKQEDLARALLLMVTINIGQVSYLNAQLHKTPRIYFVGNFLRHNSISQQRLAFAIDYWSKGKMEALFLEHEGNFGALGAFLLS 278
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A1E7FXN7_9STRA (Fumble n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXN7_9STRA) HSP 1 Score: 242 bits (617), Expect = 2.300e-68 Identity = 136/284 (47.89%), Postives = 185/284 (65.14%), Query Frame = 1
Query: 10 LVRGMQFALVNIQSECYTYRTPSEEA--EASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYG---RGYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMSGTEE 846
LV GMQFAL + ECYT+R + + + AE+ A T G P++S + R D+ + S AYP ++V++G+GVS+++VDGP ERVSGS+IGGGT+WGL +LLT ++ +S+++A +G+ VDM+VGDIYG K L++N +ASSFGK+ + P G++ EDLA+ALL +++ NIGQVAYLNAKL NT RIYFVG+FLR N +++ +L++AIDYWS GEMEALFLEHEGY GALGAFLMS E
Sbjct: 109 LVAGMQFALSTVVGECYTFRPKQDSTTEQTTEKAESANASSHT-----GSGPNESEQESR---------------------DSISYSSAYPYMLVTIGTGVSVLRVDGPRQHERVSGSTIGGGTFWGLMRLLTDVESFHDSMKLAEKGDLSKVDMMVGDIYGDNSEALEKLGLAANIVASSFGKLVSKDDPS---KGLTQEDLARALLSLVTNNIGQVAYLNAKLHNTPRIYFVGSFLRENMISQRRLSYAIDYWSKGEMEALFLEHEGYFGALGAFLMSQNIE 363
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A7R9Y8Q7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q7_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.310e-68 Identity = 139/289 (48.10%), Postives = 186/289 (64.36%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTYR-TPSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGRGYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMS----GTEEPA 852
M+CLVRG+QF L N++ E YTY+ +P+E+AEA+ N MR + E+++K V + + + +P +VVS+G+GVSIIKV+GP FERVSGSSIGGGTYWGLC+L TKA + + L +A G S+H+DM VGDIYG Y+ L + T+A SFGK+ E P G V D A++LL+MI+ NIGQVAYLNA + R I+F+G+F+RHN ++ +LA+AID+WS G MEALFL+HEG+ GALGAFL S G E PA
Sbjct: 288 MECLVRGLQFVLDNVKDEVYTYKPSPAEQAEAA--------------------------NETMRRKDK-----EFTLKQV--LPSASLKRTFPFMVVSIGTGVSIIKVEGPGKFERVSGSSIGGGTYWGLCRLFTKATTFKQVLDLAEDGTSEHLDMSVGDIYGGDYTSIGLPAETVAGSFGKLASKERPWG---NVRDCDFARSLLLMITNNIGQVAYLNAIQHDVRNIFFIGSFMRHNSISATRLAYAIDFWSKGTMEALFLKHEGFFGALGAFLTSSYRTGKERPA 540
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A7S2JVE0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVE0_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.350e-67 Identity = 136/281 (48.40%), Postives = 180/281 (64.06%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTYRTPSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGR---GYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMS 834
++ +V GMQF L ++ ECYT++ EE P S+ + M + +S KV R D T + +YP ++V++G+GVSI+++DGP RVSGS+IGGGTY+GLC+LLT N+ + L +A G+ VDM+VGDIYG K L +N +ASSFGK+ A P GV+ EDLA+ALL+MI+ NIGQVAYLNA L+ T RIYFVGNFLRHN+L+ +LA+AIDYWS G+MEALFLEHEGY GALGAFL++
Sbjct: 221 LEAMVVGMQFVLSSVVGECYTFKPRDEEL---------------------PRRKTSISSETMDGPVD---DWWWSRKVKR--DTATDNASYPYLLVTIGTGVSILRIDGPRKHTRVSGSTIGGGTYYGLCRLLTTVDNFQDVLDLAKEGDPTKVDMMVGDIYGAHSDALEKLGLPANIVASSFGKL---VAKHDPADGVTEEDLARALLLMITNNIGQVAYLNACLYKTPRIYFVGNFLRHNNLSARRLAYAIDYWSGGKMEALFLEHEGYFGALGAFLLN 472
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: B7G788_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G788_PHATC) HSP 1 Score: 236 bits (601), Expect = 9.020e-67 Identity = 137/278 (49.28%), Postives = 176/278 (63.31%), Query Frame = 1
Query: 1 MKCLVRGMQFALVNIQSECYTYRTPSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEVGVKLEYSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGR---GYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAF 825
++ LV GMQF L + ECYTYR P E L+ R +S KV R D T S YP ++V++G+GVSI++VDGP ERVSGS+IGGGTYWGL +LLT +++ +++A +G++ VDM+VGDIYG K L SN +ASSFGK+ A P +G+ EDLA+ALL+M++ NIGQVAYLNAKL NT RIYFVGNFLR N++++ +LA+AID+WS GEMEALFLEHEGY GALGAF
Sbjct: 92 LESLVAGMQFVLSTVIGECYTYR-PEE-----------------------------LKGDGWR----------WSRKVQR--DAITYSSTYPYMLVTIGTGVSILRVDGPRKHERVSGSTIGGGTYWGLIRLLTDIDDFEHVMRLAEQGDATKVDMMVGDIYGNKSDALEKLGLPSNLVASSFGKL---VAKDDPANGLKEEDLARALLLMVTNNIGQVAYLNAKLHNTPRIYFVGNFLRQNNISQRRLAYAIDFWSKGEMEALFLEHEGYFGALGAF 324
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A7S1ZWH9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWH9_TRICV) HSP 1 Score: 230 bits (586), Expect = 1.620e-66 Identity = 115/192 (59.90%), Postives = 148/192 (77.08%), Query Frame = 1
Query: 256 TSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGR---GYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGA 822
T + AYP ++V +G+GVSI++VDGP ER+SGS+IGGGTYWGLC+LLT A ++D +L++A RG+ VDM+VGDIYG K L SN +ASSFGK+ A P +G+ EDLA+ALL+M++ NIGQVAYLNA+L+ T+RIYFVGNFLR N +++ +LA+AI YWS GE EALFLEHEGY GALGA
Sbjct: 1 TDAEAYPHLLVMIGTGVSILRVDGPRRHERISGSTIGGGTYWGLCRLLTDAESFDHALRLAERGDPSKVDMMVGDIYGEDSDALEKLGLPSNVVASSFGKL---VAKVDPAAGLRQEDLARALLIMVTNNIGQVAYLNARLYGTKRIYFVGNFLRRNAVSQRRLAYAIHYWSGGENEALFLEHEGYFGALGA 189
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Match: A0A1Z5KK65_FISSO (Type II pantothenate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK65_FISSO) HSP 1 Score: 246 bits (628), Expect = 3.420e-66 Identity = 143/309 (46.28%), Postives = 192/309 (62.14%), Query Frame = 1
Query: 10 LVRGMQFALVNIQSECYTYRTPSEEAEASSGAEAGPAVGGTEGDVGGPSPDDSLRNRRMREITEV----GVKLE----------------YSMKVVRSIDNETSSPAYPAIVVSMGSGVSIIKVDGPANFERVSGSSIGGGTYWGLCKLLTKAANYDESLQMASRGNSDHVDMLVGDIYGR---GYSKFQLSSNTLASSFGKIGGMEAPRGPGSGVSGEDLAKALLVMISLNIGQVAYLNAKLFNTRRIYFVGNFLRHNHLAEMQLAFAIDYWSSGEMEALFLEHEGYLGALGAFLMSGTEEPAEDAND 867
LV GMQF L + ECY++R ++ + SS V + P S + +T+ G ++E +S KV R D +SS YP ++VS+G+GVSI++VDGP +ER+SGS+IGGGTYWGL +LLT ++D+ ++M + G+ VDM+VGDIYG K L +N +ASSFGK+ A P SG+ EDLA+ALL+MI+ NIGQVAYLNAKL T+RIYF+GNFLR N +++ +L++AIDYWS GEMEALFLEHEGY GALGAFL+S DA +
Sbjct: 425 LVAGMQFVLRTVVGECYSFRPATDTSSTSS-------VNLSRATSFRNEPSSSFESESELSLTKGTSVNGQEVEGVFIPETPPLAVDEWWWSRKVRR--DTVSSSETYPYLLVSIGTGVSILRVDGPRKYERISGSTIGGGTYWGLIRLLTDIEDFDDVMRMVANGDPTKVDMMVGDIYGDKSDALEKLGLPANLVASSFGKL---VAKEDPASGLKQEDLARALLMMITNNIGQVAYLNAKLSKTKRIYFIGNFLRQNKISQRRLSYAIDYWSKGEMEALFLEHEGYFGALGAFLLSQNVNEPSDAEE 721 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10189.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10189.441.1 >prot_H-fluviatilis_contig10189.441.1 ID=prot_H-fluviatilis_contig10189.441.1|Name=mRNA_H-fluviatilis_contig10189.441.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=296bp MKCLVRGMQFALVNIQSECYTYRTPSEEAEASSGAEAGPAVGGTEGDVGGback to top mRNA from alignment at H-fluviatilis_contig10189:2..4995+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10189.441.1 ID=mRNA_H-fluviatilis_contig10189.441.1|Name=mRNA_H-fluviatilis_contig10189.441.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=4994bp|location=Sequence derived from alignment at H-fluviatilis_contig10189:2..4995+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10189:2..4995+ >mRNA_H-fluviatilis_contig10189.441.1 ID=mRNA_H-fluviatilis_contig10189.441.1|Name=mRNA_H-fluviatilis_contig10189.441.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1776bp|location=Sequence derived from alignment at H-fluviatilis_contig10189:2..4995+ (Heribaudiella fluviatilis SAG_13_90)back to top |