mRNA_H-fluviatilis_contig10186.437.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI) HSP 1 Score: 243 bits (621), Expect = 4.730e-75 Identity = 123/258 (47.67%), Postives = 164/258 (63.57%), Query Frame = 2
Query: 71 SFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFE--DDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVLP 838
S V A GM N+ E LRV+ PA + V+++ + V W G + D RFE+DLHY GSYS+ FE D+CG + +LC++G+ C +P+PV G S GY+V++ +VG E CS EFYL S AD + +G P++ VV P +LA AG YTVEFD+DN + FKIDLY A+G+GDCG WV+S+CDKPDVGC D+ GDYD++IP+ + GGMY IRVG+F DD+VF CS FEV+P
Sbjct: 3 SSVAFIAALTGMLGNIITDTEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGT--ETFRCSDEFYLMSSADASDQDG-----PTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVP 253
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.040e-72 Identity = 122/260 (46.92%), Postives = 167/260 (64.23%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDF--EDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEV 832
++ +F+ A A LG N E LRV+ PA + V + R + V W G D RFEVDLHY GSYS+ F +DCG + ++C++ + C S P+PV G S +GY+V+++EVG +N CS +FYL + AD ++E G P++ VV P ++LA AGE YTVEFD+DN + FKIDLYKA+G+GDCG+WVTS+CDKPD+GC DS GDYDV+IP + GMY IRVG+F DD+++ CS FE+
Sbjct: 2 VSSVAFLTALAGVLG---NTITSTEALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGT--DNFRCSEDFYLVASAD--VLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI) HSP 1 Score: 234 bits (598), Expect = 3.330e-71 Identity = 126/263 (47.91%), Postives = 170/263 (64.64%), Query Frame = 2
Query: 77 VMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFED-DCGMFYRHLCSDGE-IGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKA---QGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVLPMPAD 850
++A A LG T + E L+V+ PA + V++ R + V W+G + D RFE+DLHY GSYSY FE+ +CG + ++C++G+ GC + S P+P+GG S GY++++ EVG+ + CS +FYL S AD + G P+I VV P +LA AGE YTVEFD+DN + FKIDLYKA G+GDCGTWVTS+CDKPDVGC DS GDY+V+IP + GMY IRVG+F DDT++ CS FEV+ AD
Sbjct: 8 LVALAGILGHTTITST--EALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAECGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGS--DTYRCSDDFYLMSSADAPAVGEDG--GPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVVAAAAD 264
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 233 bits (593), Expect = 7.500e-71 Identity = 124/259 (47.88%), Postives = 163/259 (62.93%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVL 835
M R FV LG+A+ L VV PA+GD+V++ R + V WSG + RFE+DL+Y S ED+CG + LC GE GC PD+ G +D ++P+P+ G+SG GYKV+V +V ++S CS EFYL + AD G P + V +P A AGEEYTVEFD+DN + F IDLY A GSGDCGT++ ++CDKP +GC+DSMGDYDV IP+ GMYTIRVG F D++V+GCS FE+L
Sbjct: 2 MVRTGFVALACGMLGVASA-------LEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMC--MEDECGEWVTALCPYGEDGC-PDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDE-DSSDCSDEFYLMAHADAPSASD--AGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.860e-69 Identity = 117/233 (50.21%), Postives = 153/233 (65.67%), Query Frame = 2
Query: 137 LRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVL 835
L VV PA GDIV+A R + V W+G + R+E+DL+Y GS ED+CG + LC GE GC PD+ G +D ++P+P+ G+SG GYKV+V +V ++ CS EFYL + A+ G P + V +P A AGEEYTVEFD+DN + F IDLY A GSGDCGT++ ++CDKP +GC+DSMGDYDV IP+ GMYTIRVG F DD+V+GCS FE+L
Sbjct: 8 LEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMC--MEDECGDWVTALCPYGEDGC-PDNEGDYDIVMPEPMSGTSGSGYKVRVADVDD-DDSGDCSDEFYLMAHAEAP--SAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 212 bits (539), Expect = 7.470e-63 Identity = 116/259 (44.79%), Postives = 160/259 (61.78%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVL 835
MAR +F LG A L VV PA+GD+V+A+ + V W+G R+++DL+Y GS ED+CG + LC G+ GC PD+ G +D ++P+P+ G+S GYKV VT+ + + CS +F L +A + +G ++V +P + A AG EYTVEFD+DN + F IDLY + GSGDCGT+VT+ICDKP +GC+DS GDYDV+IP T GMY+IRVGVF DD V+GCS FE++
Sbjct: 1 MARTAFAALAFGMLGAANA-------LEVVSPAAGDMVVADSAYTVEWTGATS-GRYDIDLYYCGSVC--MEDECGDWVTALCPYGDDGC-PDTQGDYDVVMPEPMDGTSS-GYKVMVTD-SSDESDYGCSGDFTL--IASTEAPDATDMGA-YVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.680e-62 Identity = 118/259 (45.56%), Postives = 154/259 (59.46%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVL 835
MAR FV LG A L VV P++ IV+A+R + V W+G + RFE+DL++ GS ED CG + LC GE GC PD+ G +D ++P+P+ G S GYKV+V +V + ++ CS FYL +A E + + V +P E A AGEEYTVEFD+DN + F IDLY A G GDCGT+VTSICDKP +GC+DSMGDYDV IP T G Y IRVG F D+ ++GCS F ++
Sbjct: 1 MARTGFVALACAMLGAANA-------LEVVTPSADLIVVADRTYTVEWTGADS-GRFEIDLYHCGSMC--MEDSCGDWVTALCPYGEEGC-PDNEGDYDIVMPEPMSGESNSGYKVRVMDV-SDEDSMDCSDAFYL--MASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 210 bits (534), Expect = 6.620e-62 Identity = 121/264 (45.83%), Postives = 157/264 (59.47%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYL------SSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEV 832
M R FV LG A L+V P+ G VIA+R + V W+G + D RFE+DL+Y GS EDDCG + LC GE GC PD+ G +D ++P+P+ G+SG GYKV+V ++ E++ CS EFYL SV DE +G P++ V +P LA EYTVEFD+DN + + F IDLY+A G GDCGT+V SICDKP +GC+DSMGDYDV IP T G Y IRV F DD+++ CS F +
Sbjct: 1 MTRTGFVALACGMLGAANA-------LKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMC--MEDDCGDWVTALCPYGEDGC-PDNEGDYDIVMPEPMLGTSGSGYKVRVWDI-HDEEDADCSDEFYLLASSEAPSVGDE---DG-----PTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 202 bits (515), Expect = 3.020e-59 Identity = 117/261 (44.83%), Postives = 159/261 (60.92%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENS-ACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYK-AQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEVL 835
MAR +F LG A L VV PA+G VIA+R + V W+G D+RFE+DL+Y GS+ ED+CG + LC G GC PD+ G +D ++P+P+ G+S GYKV VT+ + E+S CS +F L + D G S+ V +P + A AG YTVE+D++N +T+ F IDLY G+GDCGT+V ++CDKP +GC DS GDYDV IP TP GMY++RVGVF+DD +F CS FE++
Sbjct: 1 MARTAFAALAFGMLGAANA-------LEVVSPAAGISVIADRTYTVEWTG-TSDSRFEIDLYYCGSFC--MEDECGDWVTALCPYGADGC-PDTQGDYDIVMPEPMAGTSS-GYKVVVTD--SNDESSMGCSGDFTLVASTDAPAAGEVGY---SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.870e-56 Identity = 114/258 (44.19%), Postives = 156/258 (60.47%), Query Frame = 2
Query: 59 MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGGNKDARFEVDLHYMGSYSYDFEDDCGMFYRHLCSDGEIGCSPDSSGSFDALIPKPVGGSSGHGYKVKVTEVGAAPENSACSAEFYLSSVADETMMEGWGLGTPSIAVVTPGEHSLAYAGEEYTVEFDFDNSWEFATELFKIDLYKAQGSGDCGTWVTSICDKPDVGCEDSMGDYDVLIPQQTPGGMYTIRVGVFADDTVFGCSVPFEV 832
MAR +F A GM + A+E VV P G V+A+R + V W+G RFE+DL+Y S+ D D CG + LC G GC PDS+G +D ++P+P+ G+S GYKV V + CS +F L +A E E +G S+ V +P + A AGE YTVE+D++N + +T+ F +DLY G+GDCGT+VT++CD+P +GC DS GDYDV IP TP GMY+IRVGVF D+ ++ CS FEV
Sbjct: 1 MARTAFA---AVAFGMLSAANALE----VVSPDGGISVLADRAYTVEWTGTTT-GRFEIDLYYCNSFCMD--DVCGDWVTALCPYGADGC-PDSAGDYDIIMPEPMSGTSS-GYKVMVKNA-EDESDMGCSDDFTL--IASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10186.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10186.437.1 >prot_H-fluviatilis_contig10186.437.1 ID=prot_H-fluviatilis_contig10186.437.1|Name=mRNA_H-fluviatilis_contig10186.437.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=266bp MARFSFVMACATTLGMATNVAAVEEVLRVVEPASGDIVIAERYFPVVWSGback to top mRNA from alignment at H-fluviatilis_contig10186:1990..5311- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10186.437.1 ID=mRNA_H-fluviatilis_contig10186.437.1|Name=mRNA_H-fluviatilis_contig10186.437.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=3322bp|location=Sequence derived from alignment at H-fluviatilis_contig10186:1990..5311- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10186:1990..5311- >mRNA_H-fluviatilis_contig10186.437.1 ID=mRNA_H-fluviatilis_contig10186.437.1|Name=mRNA_H-fluviatilis_contig10186.437.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1596bp|location=Sequence derived from alignment at H-fluviatilis_contig10186:1990..5311- (Heribaudiella fluviatilis SAG_13_90)back to top |