mRNA_H-fluviatilis_contig101829.433.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A6H5JU07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU07_9PHAE) HSP 1 Score: 144 bits (362), Expect = 4.330e-39 Identity = 64/92 (69.57%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 22 SQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
Q+PDPVIEQF PTR VLWR+W+GT+LE+TW +T+ NM VAL+VCL +R +V YP+LS QL K+DIIWKI MTLTTFILTFFV+Q+YA+WR
Sbjct: 22 EQIPDPVIEQFVPTRAVLWRKWKGTMLEDTWEATMLNMVVALVVCLAYQRLQVSYPRLSEQLFKIDIIWKIHMTLTTFILTFFVSQSYAMWR 113
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: D8LQV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV7_ECTSI) HSP 1 Score: 140 bits (354), Expect = 1.140e-37 Identity = 62/91 (68.13%), Postives = 79/91 (86.81%), Query Frame = 1
Query: 25 QVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
++PDPVIEQF PTR VLWR+W+GT+LE+TW +T+ NMGVAL+VCL +R ++ P+LS QL K+DIIWKI MTLTTFILTFFV+Q+YA+WR
Sbjct: 22 EIPDPVIEQFVPTRAVLWRKWKGTMLEDTWEATVLNMGVALVVCLAYQRLQLSCPRLSEQLFKIDIIWKIHMTLTTFILTFFVSQSYAMWR 112
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A7S2XP54_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP54_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.750e-17 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + P++ QF+P+ +WRRW GT+ ETWR+ L NM A ++ L + + PQ L +I+W +++TTF LTFF+NQ+YALWR
Sbjct: 155 LIDESVRTSARKPIMMQFDPSSGYIWRRWSGTVFSETWRTCLGNMLYATIIALFYKAN----PQFRESLTGFNILWGQLLSVTTFTLTFFLNQSYALWR 249
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: B8CD25_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD25_THAPS) HSP 1 Score: 83.2 bits (204), Expect = 1.830e-16 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + +PV+ QF P R +WR+WRGT+ ETW+S L NM +A V +G YP L +L I+W +++TTF LTFF+NQ+Y LWR
Sbjct: 361 LIDESVRTSSRNPVMMQFNPKRGWIWRQWRGTVFSETWKSGLMNMVLATCV-VGLYG---VYPNLKDKLQGFSILWGQLLSVTTFTLTFFLNQSYGLWR 455
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: K0TF44_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TF44_THAOC) HSP 1 Score: 82.4 bits (202), Expect = 3.380e-16 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCL--GCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + PV+ QF P R +WR+WRGT+ ETW+S L NM ++ LV G + P+L L I+W +++TTF LTFF+NQ+Y LWR
Sbjct: 198 LIDESVRTSARQPVMMQFNPKRGWIWRQWRGTVFSETWKSGLRNMALSTLVVFLYGAQ------PKLKDLLQGFSILWGQLLSVTTFTLTFFLNQSYGLWR 292
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A1Z5K7E8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7E8_FISSO) HSP 1 Score: 81.6 bits (200), Expect = 6.250e-16 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLK-VDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + P++ QF+P+ +W+RW+GTI ETW S + M A LV + CR YP + L I+W +++TTF LTFFVNQ+YALWR
Sbjct: 22 LIDESVRTSARRPIMMQFDPSSGWIWKRWKGTIFSETWDSCVAKMVYACLVFVLCRT----YPSTVKETLSGFHILWGQLLSVTTFTLTFFVNQSYALWR 117
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A7S3QDY6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDY6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 8.350e-16 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + +PV+ QF+P+ +WRRW+GTI ETWR +TN+ +A ++ + V + Q L +I+W +++TTF LTFF+NQ+Y LWR
Sbjct: 155 LIDESVRTAARNPVMMQFDPSSGWIWRRWKGTIFSETWRRAVTNICIATVIWTMLSYNRVTFLQ---NLSGFNILWGQLLSVTTFTLTFFLNQSYTLWR 250
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A1Z5KAA7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAA7_FISSO) HSP 1 Score: 81.3 bits (199), Expect = 8.530e-16 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLK-VDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + P++ QF+P+ +W+RW+GTI ETW S + M A L+ + CR YP + L I+W +++TTF LTFFVNQ+YALWR
Sbjct: 22 LIDESVRTSARRPIMMQFDPSSGWIWKRWKGTIFSETWDSCVAKMVYACLIFVLCRT----YPSTVKETLSGFHILWGQLLSVTTFTLTFFVNQSYALWR 117
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A7S2WCN8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WCN8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 7.330e-15 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E + P++ QF+P+ +WRRW+GT+ ETW S + N+ A ++ + + ++ L+ +I+W +++TTF LTFFVNQ+YALWR
Sbjct: 223 LIDESVRTNARKPIMMQFDPSSGWIWRRWKGTVFCETWTSCVRNILYATVIAIFYKARPSFWESLTG----FNILWGQLLSITTFTLTFFVNQSYALWR 317
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Match: A0A7S2EN81_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EN81_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.390e-14 Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 1 MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLVCLGCRRSEVYYPQLSSQLLKVDIIWKIQMTLTTFILTFFVNQAYALWR 297
+I E ++ P++ QF+P+ +WRRWRGTI ETW++ + NM +A +V + + + +I+W +++TTF LTFF+N +YALWR
Sbjct: 116 LIDESVRTKSRKPIMRQFDPSSGWIWRRWRGTIFSETWKTCVKNMFIATIVTIVFHNCAPFREAVKG----FNILWGQLLSVTTFTLTFFLNVSYALWR 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig101829.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig101829.433.1 >prot_H-fluviatilis_contig101829.433.1 ID=prot_H-fluviatilis_contig101829.433.1|Name=mRNA_H-fluviatilis_contig101829.433.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=101bp MIIECFPSQVPDPVIEQFEPTRDVLWRRWRGTILEETWRSTLTNMGVALLback to top mRNA from alignment at H-fluviatilis_contig101829:7..824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig101829.433.1 ID=mRNA_H-fluviatilis_contig101829.433.1|Name=mRNA_H-fluviatilis_contig101829.433.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=818bp|location=Sequence derived from alignment at H-fluviatilis_contig101829:7..824- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig101829:7..824- >mRNA_H-fluviatilis_contig101829.433.1 ID=mRNA_H-fluviatilis_contig101829.433.1|Name=mRNA_H-fluviatilis_contig101829.433.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=606bp|location=Sequence derived from alignment at H-fluviatilis_contig101829:7..824- (Heribaudiella fluviatilis SAG_13_90)back to top |