mRNA_H-fluviatilis_contig10134.343.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A6H5JF91_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF91_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.430e-45 Identity = 78/103 (75.73%), Postives = 89/103 (86.41%), Query Frame = 1
Query: 1 VRDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
VRD H D GA+LLGLGTFAA+E PVNT LRA+KLFPGPHLYAGA +VVA VAASLVP+MQKG+DTAR+A + I+FGMIALFAWQ+FTG I KVWEFTK+P
Sbjct: 244 VRDLHYDAGALLLGLGTFAAVEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 346
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A835YJX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX9_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.160e-41 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 1
Query: 1 VRDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
VRD+H ++G+++LGLG FAAIE PVNT +RA KLFPGPHLYAGAGIVVA +AASLV QMQKGN+ ARLA IGI+FG++ FAWQ+ TG I KV EFTKWP
Sbjct: 175 VRDKHYEVGSLILGLGVFAAIEGPVNTYIRAGKLFPGPHLYAGAGIVVAWGIAASLVQQMQKGNEWARLAHIGINFGILGFFAWQVNTGLGITAKVLEFTKWP 277
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: I0Z2R7_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2R7_COCSC) HSP 1 Score: 134 bits (337), Expect = 3.970e-35 Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RD+H + G++LLGLG AIE PVNT LR KLFPGPHLYAGA IVV A++LVP MQKGNDTAR I ++ +ALFAWQ+ TGFEIV KVWEF WP
Sbjct: 110 RDKHWNWGSLLLGLGVLIAIEGPVNTYLRTGKLFPGPHLYAGAAIVVLWASASALVPSMQKGNDTARNTHIALNTLNLALFAWQVPTGFEIVQKVWEFAPWP 211
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A8J9WRZ6_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRZ6_9CHLO) HSP 1 Score: 135 bits (341), Expect = 4.840e-35 Identity = 67/102 (65.69%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RD+H + G++LLGLG AIE P NT LR KLFPGPHLYAGA IVV AASLVP MQKGNDTAR I ++ +ALFAWQ+ TGFEIV KVWEF WP
Sbjct: 170 RDKHWNWGSLLLGLGVLIAIEGPANTYLRTGKLFPGPHLYAGAAIVVLWAAAASLVPAMQKGNDTARNTHIALNAVNLALFAWQVPTGFEIVQKVWEFAPWP 271
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A8J5XE69_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XE69_DIALT) HSP 1 Score: 132 bits (331), Expect = 1.800e-33 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1
Query: 1 VRDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKW 306
+RD H +G+ LLGLGT AIE PVNT +RA KLFPGPHLYAGAG VV +AA+L PQMQKG+DTAR+A IG++ +ALF WQL +G+EI+ KVWE W
Sbjct: 179 LRDTHWALGSTLLGLGTSFAIEGPVNTFMRAGKLFPGPHLYAGAGCVVFWALAAALTPQMQKGSDTARVAHIGLNSAGLALFTWQLVSGWEILSKVWEKVPW 280
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A7S0P6S8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P6S8_9EUKA) HSP 1 Score: 130 bits (328), Expect = 5.230e-33 Identity = 63/103 (61.17%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 1 VRDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
+RD+H +G+V+LGLGT AIE PVNT LRA+KLFPGPHLYAGAG+VV+ +AASLVP M KG ++AR+A I + + LF WQL TG+EI +KV +FTK+P
Sbjct: 180 LRDKHYQVGSVILGLGTSFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVSWAMAASLVPLMSKGKESARIAHIAFNSLALGLFTWQLPTGWEITLKVIKFTKFP 282
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A7S2PXB9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXB9_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.850e-33 Identity = 61/102 (59.80%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RD+H GA+L +GT AIE P+NT RA KLFPGPHLYAGAG+VV +AAS+VP MQKGND AR IG + I LF WQ+ +G I++KV EFTKWP
Sbjct: 21 RDKHFSQGALLAFIGTAFAIEGPLNTYARAGKLFPGPHLYAGAGLVVLWALAASMVPAMQKGNDAARTVHIGANLAGIGLFGWQVTSGIPILLKVVEFTKWP 122
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A7S2DBY3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DBY3_9EUKA) HSP 1 Score: 128 bits (321), Expect = 1.750e-32 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RD+H +G+V+LGLGT AIE PVNT LRA+KLFPGPHLYAGAGIVV +AASLVP M KG D AR I + + LF WQL TG+EI++KV +FTK+P
Sbjct: 133 RDKHYQVGSVVLGLGTSFAIEGPVNTFLRAQKLFPGPHLYAGAGIVVCWAMAASLVPLMAKGQDAARNGHIAFNVLALGLFTWQLPTGWEILLKVIKFTKFP 234
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: B8BZ55_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ55_THAPS) HSP 1 Score: 127 bits (319), Expect = 1.790e-32 Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RD+H + G++LL +G AIE P+NT RA KLFPGPHLYAGAG+VV +AAS+VP MQKGNDTAR IG + + LFAWQ+ +G I++KV EFTKWP
Sbjct: 108 RDKHFNQGSLLLFIGIAFAIEGPLNTYARAGKLFPGPHLYAGAGLVVLWALAASMVPAMQKGNDTARTVHIGANVAGLGLFAWQVTSGIPILLKVLEFTKWP 209
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Match: A0A061SCV0_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCV0_9CHLO) HSP 1 Score: 129 bits (324), Expect = 2.230e-32 Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 4 RDRHNDMGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVPQMQKGNDTARLAQIGISFGMIALFAWQLFTGFEIVVKVWEFTKWP 309
RDRHN G+ LLGLG +IE +NT LR KLFPGPHL+AGAGI V +AASLVP MQKGNDTAR I ++ I LFAWQL TGF+IV+KV++F WP
Sbjct: 185 RDRHNYWGSALLGLGVLLSIEGGLNTYLRVGKLFPGPHLFAGAGITVLWALAASLVPAMQKGNDTARSLHIALNTVNIGLFAWQLPTGFDIVLKVFKFAPWP 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10134.343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10134.343.1 >prot_H-fluviatilis_contig10134.343.1 ID=prot_H-fluviatilis_contig10134.343.1|Name=mRNA_H-fluviatilis_contig10134.343.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=97bp MGAVLLGLGTFAAIERPVNTLLRAEKLFPGPHLYAGAGIVVACKVAASLVback to top mRNA from alignment at H-fluviatilis_contig10134:891..1983+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10134.343.1 ID=mRNA_H-fluviatilis_contig10134.343.1|Name=mRNA_H-fluviatilis_contig10134.343.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1093bp|location=Sequence derived from alignment at H-fluviatilis_contig10134:891..1983+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10134:891..1983+ >mRNA_H-fluviatilis_contig10134.343.1 ID=mRNA_H-fluviatilis_contig10134.343.1|Name=mRNA_H-fluviatilis_contig10134.343.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=582bp|location=Sequence derived from alignment at H-fluviatilis_contig10134:891..1983+ (Heribaudiella fluviatilis SAG_13_90)back to top |