mRNA_H-fluviatilis_contig101017.274.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: D7G7E8_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E8_ECTSI) HSP 1 Score: 103 bits (257), Expect = 2.620e-25 Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGSGKISCPVVFPLTGLDLSEVV 171 NAWYC CKKHQ ATKKLDLWKVPPVLIVHLKRFAGS KIS V FPL GLDLSEVV Sbjct: 255 NAWYCSNCKKHQRATKKLDLWKVPPVLIVHLKRFAGSSKISSLVTFPLEGLDLSEVV 311
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A158PN45_ANISI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A158PN45_ANISI) HSP 1 Score: 89.7 bits (221), Expect = 1.480e-19 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGSG----KISCPVVFPLTGLDLSEVV 171 N WYCP CK+HQ ATKKLDLW++PP+LIVH+KRF SG KI P+ FPLTGLDL++ V Sbjct: 726 NLWYCPHCKEHQRATKKLDLWRLPPILIVHMKRFTCSGWTREKIDIPIKFPLTGLDLTDRV 786
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A8H6T2X4_9AGAR (Uncharacterized protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6T2X4_9AGAR) HSP 1 Score: 85.5 bits (210), Expect = 4.580e-18 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGS----GKISCPVVFPLTGLDLSEVV 171 + WYCP CKKHQ ATKK DLWKVP +L+VHLKRF+ S KI P+ FP+ GLDLS +V Sbjct: 924 DLWYCPKCKKHQQATKKFDLWKVPDILVVHLKRFSNSRTLRDKIDAPIDFPIEGLDLSSMV 984
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A067Q680_9AGAM (Uncharacterized protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067Q680_9AGAM) HSP 1 Score: 84.7 bits (208), Expect = 8.550e-18 Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGS----GKISCPVVFPLTGLDLSEVV 171 + WYCP CKKHQ ATKK DLWKVP VL+VHLKRF+ S KI V FPL GLDLSE+V Sbjct: 958 DLWYCPRCKKHQQATKKFDLWKVPDVLVVHLKRFSNSRVVRDKIDAFVDFPLEGLDLSEMV 1018
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A0B2W064_TOXCA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2W064_TOXCA) HSP 1 Score: 83.6 bits (205), Expect = 2.170e-17 Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFA----GSGKISCPVVFPLTGLDLS 162 N WYCP CK+HQ ATKKLDLW++PPVLIVHLKRF KI PV FPL+GLDL+ Sbjct: 702 NLWYCPRCKEHQRATKKLDLWRLPPVLIVHLKRFHFTRWSREKIDLPVEFPLSGLDLT 759
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: F1KVS2_ASCSU (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KVS2_ASCSU) HSP 1 Score: 83.6 bits (205), Expect = 2.170e-17 Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFA----GSGKISCPVVFPLTGLDLSEVV 171 N WYC CK+HQ ATKKLDLWK+PPVLI+HLKRF KI PV FPLTGLDL+ V Sbjct: 698 NLWYCSRCKEHQHATKKLDLWKLPPVLIIHLKRFHFTRWSREKIDIPVEFPLTGLDLTSRV 758
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A183UDH3_TOXCA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UDH3_TOXCA) HSP 1 Score: 83.6 bits (205), Expect = 2.170e-17 Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFA----GSGKISCPVVFPLTGLDLS 162 N WYCP CK+HQ ATKKLDLW++PPVLIVHLKRF KI PV FPL+GLDL+ Sbjct: 740 NLWYCPRCKEHQRATKKLDLWRLPPVLIVHLKRFHFTRWSREKIDLPVEFPLSGLDLT 797
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A4S4MAE0_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4MAE0_9AGAM) HSP 1 Score: 83.6 bits (205), Expect = 2.180e-17 Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGS----GKISCPVVFPLTGLDLSEVV 171 + WYCP CKKHQ ATKK DLW VP VL+VHLKRF+ S KI V FPLTGLDL+E+V Sbjct: 978 DPWYCPRCKKHQQATKKFDLWNVPDVLVVHLKRFSNSRALRDKIETFVDFPLTGLDLTEMV 1038
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: A0A1X6N729_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6N729_9APHY) HSP 1 Score: 82.8 bits (203), Expect = 4.060e-17 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGS----GKISCPVVFPLTGLDLSEVV 171 + WYCPICKKHQ ATK+ D+WKVP VL+VHLKRF+ S KI V FPL GLDLS +V Sbjct: 875 DLWYCPICKKHQQATKRFDIWKVPDVLVVHLKRFSNSRMLRDKIDTFVDFPLEGLDLSPMV 935
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Match: H3ARA3_LATCH (Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Latimeria chalumnae TaxID=7897 RepID=H3ARA3_LATCH) HSP 1 Score: 81.6 bits (200), Expect = 1.030e-16 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 1 NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGS----GKISCPVVFPLTGLDLSE 165 + WYCP CK+HQ ATKKLDLW +PPVL+VHLKRF+ S K+ VVFP+T LD+SE Sbjct: 806 DPWYCPNCKQHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVVFPITDLDMSE 864 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig101017.274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig101017.274.1 >prot_H-fluviatilis_contig101017.274.1 ID=prot_H-fluviatilis_contig101017.274.1|Name=mRNA_H-fluviatilis_contig101017.274.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=57bp NAWYCPICKKHQPATKKLDLWKVPPVLIVHLKRFAGSGKISCPVVFPLTGback to top mRNA from alignment at H-fluviatilis_contig101017:97..267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig101017.274.1 ID=mRNA_H-fluviatilis_contig101017.274.1|Name=mRNA_H-fluviatilis_contig101017.274.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=171bp|location=Sequence derived from alignment at H-fluviatilis_contig101017:97..267+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig101017:97..267+ >mRNA_H-fluviatilis_contig101017.274.1 ID=mRNA_H-fluviatilis_contig101017.274.1|Name=mRNA_H-fluviatilis_contig101017.274.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=342bp|location=Sequence derived from alignment at H-fluviatilis_contig101017:97..267+ (Heribaudiella fluviatilis SAG_13_90)back to top |