mRNA_H-fluviatilis_contig101015.273.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI) HSP 1 Score: 178 bits (451), Expect = 8.040e-50 Identity = 86/98 (87.76%), Postives = 96/98 (97.96%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
EN+DTLALLDCLGEGAAAEEGGPLRE+CA+GVVEFLRYAIKQ++K+QQ AEGPVAVDALLTRVFSL THPDKNRRLGGL+AFNQLC+PLREETAL++R
Sbjct: 1109 ENDDTLALLDCLGEGAAAEEGGPLREVCAKGVVEFLRYAIKQSTKRQQ-AEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNR 1205
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE) HSP 1 Score: 175 bits (444), Expect = 7.060e-49 Identity = 84/98 (85.71%), Postives = 95/98 (96.94%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
EN+DTLALLDCLGEGAAAE+GGPLRE+CA+GVVEFLRYAIKQ++K+QQ AEGP AVDALLTRVFSL THPDKNRRLGGL+AFNQLC+PLREETAL++R
Sbjct: 768 ENDDTLALLDCLGEGAAAEDGGPLREVCAKGVVEFLRYAIKQSTKRQQ-AEGPAAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNR 864
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A2C9K058_BIOGL (DNA-dependent protein kinase catalytic subunit n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K058_BIOGL) HSP 1 Score: 89.0 bits (219), Expect = 1.630e-18 Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E+ +T+ALLDC+ +G LR+ CA+ + EFL++++KQ SKK + + P+ V ++L R++S HP+ ++RLG +AFN + LREE AL+DR
Sbjct: 1008 ESPETMALLDCIFDGLIQSNDMALRDFCAKCLREFLKWSLKQISKKSAE-KNPINVKSVLKRIYSFSAHPNASKRLGAALAFNNIYMVLREEDALVDR 1104
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A6I8QDF5_XENTR (DNA-dependent protein kinase catalytic subunit n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8QDF5_XENTR) HSP 1 Score: 85.5 bits (210), Expect = 2.680e-17 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALID 291
E++DT+ALL+ + G LR+ C + + EFLR++IKQT+ +QQA+ PV +L R++SL HP+ +RLG +AFN + + REETAL++
Sbjct: 959 ESQDTVALLEAILAGIVDPVDSTLRDFCGQCIQEFLRWSIKQTTP-EQQAKSPVNTTSLFKRLYSLALHPNAFKRLGAALAFNNIYREFREETALVE 1054
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: PRKDC_XENLA (DNA-dependent protein kinase catalytic subunit n=3 Tax=Xenopus laevis TaxID=8355 RepID=PRKDC_XENLA) HSP 1 Score: 84.7 bits (208), Expect = 4.990e-17 Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALID 291
E++DT+ALL+ + G LR+ C + + EFLR++IKQT+ QQA+ PV +L R++SL HP+ +RLG +AFN + + REETAL++
Sbjct: 1024 ESQDTVALLEAILTGIVDPVDSTLRDFCGQCIQEFLRWSIKQTTP-DQQAKSPVNTTSLFKRLYSLALHPNAFKRLGAALAFNNIYRDFREETALVE 1119
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I656_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I656_PODMU) HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E++DT+ALL+ + EG LR+ C + V EFL+++IKQ S QQQ PV +L R++SL HP+ +RLG +AFN + + REE+AL+D+
Sbjct: 929 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1025
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I696_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I696_PODMU) HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E++DT+ALL+ + EG LR+ C + V EFL+++IKQ S QQQ PV +L R++SL HP+ +RLG +AFN + + REE+AL+D+
Sbjct: 968 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1064
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I629_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I629_PODMU) HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E++DT+ALL+ + EG LR+ C + V EFL+++IKQ S QQQ PV +L R++SL HP+ +RLG +AFN + + REE+AL+D+
Sbjct: 957 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1053
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I613_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I613_PODMU) HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E++DT+ALL+ + EG LR+ C + V EFL+++IKQ S QQQ PV +L R++SL HP+ +RLG +AFN + + REE+AL+D+
Sbjct: 970 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1066
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I625_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I625_PODMU) HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
E++DT+ALL+ + EG LR+ C + V EFL+++IKQ S QQQ PV +L R++SL HP+ +RLG +AFN + + REE+AL+D+
Sbjct: 970 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1066 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig101015.273.1 >prot_H-fluviatilis_contig101015.273.1 ID=prot_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=99bp ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAback to top mRNA from alignment at H-fluviatilis_contig101015:14..762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig101015.273.1 ID=mRNA_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=749bp|location=Sequence derived from alignment at H-fluviatilis_contig101015:14..762- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig101015:14..762- >mRNA_H-fluviatilis_contig101015.273.1 ID=mRNA_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=594bp|location=Sequence derived from alignment at H-fluviatilis_contig101015:14..762- (Heribaudiella fluviatilis SAG_13_90)back to top |