mRNA_H-fluviatilis_contig10100.271.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 229 bits (584), Expect = 3.680e-67 Identity = 117/150 (78.00%), Postives = 126/150 (84.00%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 +VGFREHIFTGS RVLNNPLRVRMHYGHPDLFDK VF+MTAGG+SKAS+GINLSEDIFAGYNGTIRGG++ F EY+QVGKGRDVGMQQIYKFEAKL+QGAAEQTLSRDVNRLGDRLDFFRL+SFYFGGLG Sbjct: 1525 VVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDK--VFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLG 1672
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.390e-62 Identity = 114/150 (76.00%), Postives = 122/150 (81.33%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 IVGFREHIFTGS RVL++PLR+RMHYGHPDLFDK VF+MT GG+SKASKGINLSEDIFAGYN TIRGG+V F EY QVGKGRDVGMQQIYKFEAKLAQGAAEQ+LSRDVNRLG RLDFFRL+SFYFGGLG Sbjct: 1235 IVGFREHIFTGSVSSLANYMALQELSFVTIGQRVLDDPLRIRMHYGHPDLFDK--VFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQVVFCEYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDVNRLGARLDFFRLVSFYFGGLG 1382
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S3LH45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH45_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.690e-57 Identity = 98/150 (65.33%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+G REHIFTGS RVL PL +R+HYGHPD+FDK +F++T GGISKASKGINLSEDIFAGYN RGG V F EY+Q+GKGRDVGM QIYKFEAKL+QGAAEQ+LSRDV R+ +RLDFFRL+SFY+GG+G Sbjct: 8 ILGLREHIFTGSVSSLANYMAMQEISFVTLGQRVLTRPLHIRLHYGHPDVFDK--LFFITRGGISKASKGINLSEDIFAGYNNVNRGGTVGFKEYVQIGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCNRLDFFRLLSFYYGGIG 155
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.160e-56 Identity = 104/150 (69.33%), Postives = 116/150 (77.33%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+GFREHIFTGS RVLNNPLR R+HYGHPD+FDK +F+MT GGISKASKGINLSEDIFAG+N +RGG V F EY+QVGKGRDVGMQQIYKFEAKLAQG AEQ+LSRDV+RL R+DF RL+S YFGGLG Sbjct: 1012 ILGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRQRLHYGHPDIFDK--LFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNVEFKEYVQVGKGRDVGMQQIYKFEAKLAQGNAEQSLSRDVHRLAARVDFGRLLSLYFGGLG 1159
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S0GHQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHQ8_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.200e-56 Identity = 99/150 (66.00%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+G REHIFTGS RVL NPL +R+HYGHPD+FDK +F+MT GG+SKASKGINLSEDIFAGY+ IRGG+V F EY+QVGKGRDVGM QIYKFEAKL+QGAAEQ+LSRDV R+ RLDF RL +FYFGG+G Sbjct: 27 ILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLTNPLCMRLHYGHPDVFDK--LFFMTRGGVSKASKGINLSEDIFAGYSNVIRGGQVGFKEYLQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMSHRLDFCRLFTFYFGGIG 174
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: W7U1M2_9STRA (1,3-beta-glucan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.060e-56 Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+GFREHIFTG+ RVLN PLR+R+HYGHPDLFDK +F+M GGISKASKGINLSEDIFAGYN +RGG V F EY+QVGKGRDVGMQQIYKFEAKL+QGAAEQ++SRDV R+ +R+DFFRL+++YFGG+G Sbjct: 1639 ILGFREHIFTGAVSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDK--LFFMQNGGISKASKGINLSEDIFAGYNNLLRGGSVEFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQSISRDVYRMVNRVDFFRLLTYYFGGIG 1786
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A482SV99_9ARCH (FKS1_dom1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV99_9ARCH) HSP 1 Score: 197 bits (500), Expect = 7.500e-56 Identity = 102/150 (68.00%), Postives = 116/150 (77.33%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 IVGFREHIFTGS RVLN PLR+R HYGHPDLFDK F MT GG+SKASKGINLSED+FAG+N TIRG KV F EY+QVGKGRDVG+QQ YKFEAKL+QG AEQ+LSRDV+R+ +RLDFFRL+SFY+GG+G Sbjct: 1338 IVGFREHIFTGSVSSVANYMALQELSFVTLGQRVLNQPLRIRQHYGHPDLFDK--FFVMTEGGMSKASKGINLSEDVFAGFNATIRGHKVDFVEYVQVGKGRDVGLQQTYKFEAKLSQGNAEQSLSRDVDRICNRLDFFRLLSFYYGGIG 1485
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S2JUC2_9STRA (Hypothetical protein n=3 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUC2_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.500e-55 Identity = 103/150 (68.67%), Postives = 113/150 (75.33%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+G REHIFTGS RVL PLR+R HYGHPD+FDK +F++T GGISK+SKGINLSEDIFAGYN +IRGG V F EYMQVGKGRDVGM QIYKFEAKLAQG AEQ+LSRDV RLG RLDFFRL S YFGG+G Sbjct: 860 ILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLAKPLRMRFHYGHPDVFDK--LFFITRGGISKSSKGINLSEDIFAGYNNSIRGGTVGFKEYMQVGKGRDVGMSQIYKFEAKLAQGNAEQSLSRDVYRLGQRLDFFRLCSMYFGGIG 1007
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S1FM30_9STRA (1,3-beta-glucan synthase n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FM30_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.550e-55 Identity = 100/150 (66.67%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+G REHIFTGS RVLNNPL +R+HYGHPD+FDK +F+MT GGISK+SKGINLSEDIFAGYN +RGG V F EY+QVGKGRDVGM QIYKFEAKL+QGAAEQ+LSRD+ R+G RLDF RL S YFGG+G Sbjct: 1434 ILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLNNPLCIRLHYGHPDVFDK--LFFMTRGGISKSSKGINLSEDIFAGYNNVVRGGAVGFREYIQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDIYRIGQRLDFCRLFSLYFGGIG 1581
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Match: A0A7S3H8Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Z7_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.610e-54 Identity = 99/150 (66.00%), Postives = 113/150 (75.33%), Query Frame = 1 Query: 1 IVGFREHIFTGS--------------------RVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGINLSEDIFAGYNGTIRGGKVHFSEYMQVGKGRDVGMQQIYKFEAKLAQGAAEQTLSRDVNRLGDRLDFFRLMSFYFGGLG 390 I+GFREHIFTGS RVLN PLR+R HYGHPDLF K +F MT GG+SKAS+GINLSED+FAG+N TIRG V F EY+QVGKGRDVG+QQ YKFEAKLAQG AEQ+LSRD+NR+ RLDFFRL SFY+GG+G Sbjct: 72 ILGFREHIFTGSVSSVANYMALQELSFVTLGQRVLNQPLRIRQHYGHPDLFKK--LFVMTEGGMSKASRGINLSEDVFAGFNATIRGHSVGFKEYVQVGKGRDVGLQQTYKFEAKLAQGNAEQSLSRDMNRICGRLDFFRLFSFYYGGIG 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10100.271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10100.271.1 >prot_H-fluviatilis_contig10100.271.1 ID=prot_H-fluviatilis_contig10100.271.1|Name=mRNA_H-fluviatilis_contig10100.271.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=131bp IVGFREHIFTGSRVLNNPLRVRMHYGHPDLFDKARVFYMTAGGISKASKGback to top mRNA from alignment at H-fluviatilis_contig10100:671..2265+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10100.271.1 ID=mRNA_H-fluviatilis_contig10100.271.1|Name=mRNA_H-fluviatilis_contig10100.271.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1595bp|location=Sequence derived from alignment at H-fluviatilis_contig10100:671..2265+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10100:671..2265+ >mRNA_H-fluviatilis_contig10100.271.1 ID=mRNA_H-fluviatilis_contig10100.271.1|Name=mRNA_H-fluviatilis_contig10100.271.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=786bp|location=Sequence derived from alignment at H-fluviatilis_contig10100:671..2265+ (Heribaudiella fluviatilis SAG_13_90)back to top |