mRNA_H-fluviatilis_contig100978.265.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: D7FMU9_ECTSI (Putative serine-threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMU9_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.050e-64 Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 1 Query: 1 GVLSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 GVL RT+QA +RL+E+ VWGYFTQICDALLHMHG+RI+HRD+KPANV V DG VKLGDLGLGRYL ARS LAMSQVGTPLYMSPETL+GQGH+M SDIWSLGCVLYELA L SPFA +HLTM Sbjct: 258 GVLRRTKQAGQRLDEITVWGYFTQICDALLHMHGERIIHRDVKPANVFVSRDGIVKLGDLGLGRYLSARSVLAMSQVGTPLYMSPETLKGQGHDMGSDIWSLGCVLYELAQLESPFAGKHLTM 380
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A6H5KNN9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN9_9PHAE) HSP 1 Score: 208 bits (529), Expect = 5.480e-61 Identity = 98/123 (79.67%), Postives = 109/123 (88.62%), Query Frame = 1 Query: 1 GVLSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 GVL RT+Q+ RL+E+ VWGYFTQICDALLHMHG+RI+HRD+KPANV V DG VKLGDLGLGRYL ARS LAMSQVGTPLYMSPETL+GQG++M SDIWSLGCVLYELA L SPFA +HLTM Sbjct: 559 GVLRRTKQSGRRLDEITVWGYFTQICDALLHMHGERIIHRDIKPANVFVSRDGIVKLGDLGLGRYLSARSVLAMSQVGTPLYMSPETLKGQGYDMGSDIWSLGCVLYELAQLESPFAGKHLTM 681
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: F0Y2C1_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2C1_AURAN) HSP 1 Score: 155 bits (393), Expect = 6.480e-45 Identity = 76/120 (63.33%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 19 RQARER---LNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 R+A ER E +W YF+QICDAL HMH QRI+HRDLKPANV + L+GTVK+GDLGLGR + + A S+VGTPLYMSPE L+G G++ SD+WSLGCVLYELAML SPF A L + Sbjct: 93 RKAVERKQGFEERVIWKYFSQICDALAHMHEQRILHRDLKPANVFLTLNGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAMLRSPFKAEGLNL 212
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A7S1GED1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GED1_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.040e-44 Identity = 72/121 (59.50%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 7 LSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 L + R+ R +E +W YF+QI +AL HMH +R+MHRDLKPANV + L+GTVK+GDLGLGR+ + A S+VGTPLYMSPE L+G+G+E SD+WSLGCVLYELAML+SPF L + Sbjct: 122 LRKAREREARFDERVIWKYFSQIAEALRHMHERRVMHRDLKPANVFLTLNGTVKVGDLGLGRHFSEATMEAYSKVGTPLYMSPEVLRGKGYEWKSDVWSLGCVLYELAMLTSPFKEEGLNL 242
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A812TRW5_9DINO (Nekl-3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TRW5_9DINO) HSP 1 Score: 154 bits (389), Expect = 3.560e-44 Identity = 70/121 (57.85%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 7 LSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 L + R+ R +E +W YF+Q+ A+ HMH + +MHRDLKPAN+ + L+GTVK+GDLGLGRYL + A S+VGTPLYMSPE LQG+G++ SD+WSLGCVLYELAML SPF L + Sbjct: 54 LRKARERNARFDERVIWKYFSQVAAAVAHMHERHVMHRDLKPANIFLTLNGTVKVGDLGLGRYLSEHTLEAFSKVGTPLYMSPEVLQGKGYDYKSDVWSLGCVLYELAMLISPFKEEGLNL 174
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A7S2CWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CWM8_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.440e-44 Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 4 VLSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 ++S + + L E VW YF+Q +A+ HMH RIMHRDLKP+NV V DG +KLGDLGLGRYL +S +A SQVGTPLYMSPE L+G+GH SDIWSLGC+LYELA L SPF R LTM Sbjct: 193 LISSYKAKNQTLGEHLVWTYFSQCAEAIRHMHEVRIMHRDLKPSNVFVMEDGRLKLGDLGLGRYLDLQSIMAFSQVGTPLYMSPEVLRGEGHHFSSDIWSLGCMLYELAHLRSPFQQRGLTM 314
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A7S2C573_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C573_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.150e-43 Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 13 RTRQARE-RLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 R Q RE R E +W YF QIC+A+ HMH +RIMHRDLKPAN+ + L+GTVK+GDLGLGR L + A S+VGTPLYMSPE L+G G++ SD+WS+GC+LYELAML SPF + L + Sbjct: 121 RKAQEREARFEERVIWRYFAQICEAIQHMHERRIMHRDLKPANIFLTLNGTVKVGDLGLGRELSEHTVEAHSKVGTPLYMSPEVLRGDGYDFRSDVWSVGCLLYELAMLKSPFKSEGLNL 240
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: A0A813BYI9_9DINO (Nek7 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BYI9_9DINO) HSP 1 Score: 150 bits (380), Expect = 1.300e-42 Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 7 LSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 L + R+ R +E +W YF+QI +AL HMH +RIMHRDLKPAN+ + L G VK+GDLGLGR L + S+VGTPLYMSPE L+GQG+ SD+WS+GC+LYELAML SPF + L + Sbjct: 54 LVKAREREARFDERVIWKYFSQIAEALRHMHSRRIMHRDLKPANIFLTLTGAVKVGDLGLGRILSEATVEIYSKVGTPLYMSPEVLKGQGYNWKSDVWSIGCILYELAMLQSPFKEQGLNL 174
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: G4ZQK0_PHYSP (Protein kinase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZQK0_PHYSP) HSP 1 Score: 150 bits (378), Expect = 1.450e-42 Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 19 RQARE---RLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 R+A E R +E +W YFTQ+C A+L++H RIMHRDLKPAN+ + L G VK+GDLGLGRYL + A S+VGTPLYMSPE L+G+ ++ SD+WS+GC+LYELAML SPF + L + Sbjct: 111 RKANEKGVRFDERTIWRYFTQLCGAILYLHQARIMHRDLKPANIFLTLKGVVKVGDLGLGRYLSENTVEARSKVGTPLYMSPEVLRGESYDWKSDVWSMGCILYELAMLRSPFKSEGLNL 230
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Match: W2QCF6_PHYPN (NEK protein kinase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QCF6_PHYPN) HSP 1 Score: 150 bits (378), Expect = 1.480e-42 Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 19 RQARE---RLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCLDGTVKLGDLGLGRYLHARSALAMSQVGTPLYMSPETLQGQGHEMVSDIWSLGCVLYELAMLSSPFAARHLTM 369 R+A E R +E +W YFTQ+C A+L++H RIMHRDLKPAN+ + L G VK+GDLGLGRYL + A S+VGTPLYMSPE L+G+ ++ SD+WS+GC+LYELAML SPF + L + Sbjct: 111 RKANEKGVRFDERTIWRYFTQLCGAILYLHQNRIMHRDLKPANIFLTLKGVVKVGDLGLGRYLSENTIEARSKVGTPLYMSPEVLRGESYDWKSDVWSMGCILYELAMLRSPFKSEGLNL 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100978.265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100978.265.1 >prot_H-fluviatilis_contig100978.265.1 ID=prot_H-fluviatilis_contig100978.265.1|Name=mRNA_H-fluviatilis_contig100978.265.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=123bp GVLSRTRQARERLNELAVWGYFTQICDALLHMHGQRIMHRDLKPANVLVCback to top mRNA from alignment at H-fluviatilis_contig100978:18..834+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100978.265.1 ID=mRNA_H-fluviatilis_contig100978.265.1|Name=mRNA_H-fluviatilis_contig100978.265.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=817bp|location=Sequence derived from alignment at H-fluviatilis_contig100978:18..834+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100978:18..834+ >mRNA_H-fluviatilis_contig100978.265.1 ID=mRNA_H-fluviatilis_contig100978.265.1|Name=mRNA_H-fluviatilis_contig100978.265.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=738bp|location=Sequence derived from alignment at H-fluviatilis_contig100978:18..834+ (Heribaudiella fluviatilis SAG_13_90)back to top |