mRNA_H-fluviatilis_contig100970.263.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: D7FXE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE9_ECTSI) HSP 1 Score: 133 bits (335), Expect = 5.550e-36 Identity = 58/81 (71.60%), Postives = 71/81 (87.65%), Query Frame = 1 Query: 1 ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQ 243 AL +DGPA+RGMDA +FSE+DWAFG+ SVR+LSGLYGVL+PTDLIQPYRLEMGSRV +AG +DLY YW + QC+L+D+Q Sbjct: 95 ALVFDGPAYRGMDAATFSEEDWAFGARSVRLLSGLYGVLRPTDLIQPYRLEMGSRVAVAGMKDLYEYWKGDIAQCILEDIQ 175
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A7S4FNY1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FNY1_9EUGL) HSP 1 Score: 100 bits (248), Expect = 1.040e-23 Identity = 43/79 (54.43%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 4 LAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDV 240 LA+DGPAFRG+ A +F + D AF + +R+LSGLYG+L+P DLIQPYRLEMGS++ +DLY++W D++T+ L D+ Sbjct: 76 LAFDGPAFRGLQAATFDDSDQAFAQQHLRILSGLYGILRPYDLIQPYRLEMGSKLETPKGKDLYSFWGDQITEQLNADL 154
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A0L8V3I9_9BACT (UPF0246 protein NC99_41950 n=1 Tax=Sunxiuqinia dokdonensis TaxID=1409788 RepID=A0A0L8V3I9_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 2.710e-23 Identity = 41/82 (50.00%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 4 LAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQEG 249 LA+ G ++GMDA +FSE+D+ +++R+LSGLYGVLKP DLIQ YRLEMG++ G+ G+ +LY +W ++VT+ + +D++E Sbjct: 81 LAFTGDVYQGMDAATFSENDFEVAQQTIRILSGLYGVLKPLDLIQAYRLEMGTKFGVEGAENLYGFWKEKVTKAINKDLKEA 162
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: Y1607_PSEA7 (UPF0246 protein PSPA7_1607 n=131 Tax=Bacteria TaxID=2 RepID=Y1607_PSEA7) HSP 1 Score: 98.2 bits (243), Expect = 2.930e-23 Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 4 LAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCL 228 LA+ G + G+DA SFSEDD+AF E +R+LSGLYGVL+P DL+QPYRLEMG+R+ A +DLY +W +R++Q L Sbjct: 81 LAFKGDVYTGLDAESFSEDDFAFAQEHLRMLSGLYGVLRPLDLMQPYRLEMGTRLANARGKDLYAFWGERISQWL 155
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: UPI00191F445A (peroxide stress protein YaaA n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191F445A) HSP 1 Score: 97.8 bits (242), Expect = 3.960e-23 Identity = 42/82 (51.22%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 1 ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQE 246 ALA+ G ++GM A F++++ F E VR+LSGLYG+LKP DLIQPYRLEMG+++ + GS+ LY YW D++ + L++D++E Sbjct: 78 ALAFQGDVYQGMQAEEFTKEEHNFAQEHVRILSGLYGLLKPLDLIQPYRLEMGTKLKVNGSKSLYEYWDDKIAKTLVKDLKE 159
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A3M1VGY7_9BACT (UPF0246 protein D6725_03990 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VGY7_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 4.360e-23 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 1 ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQ 243 AL + G ++G+ A +FS +DW F + VR+LSGLYGVL+P DL+QPYRLEMG+R+ +DLY YW DRVT L +D++ Sbjct: 80 ALLFRGDVYQGLQADAFSPEDWRFAQQHVRILSGLYGVLRPLDLVQPYRLEMGTRLPNPRGQDLYAYWRDRVTDLLSRDLK 160
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: UPI00135CCB98 (peroxide stress protein YaaA n=1 Tax=Sunxiuqinia indica TaxID=2692584 RepID=UPI00135CCB98) HSP 1 Score: 97.4 bits (241), Expect = 5.260e-23 Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 4 LAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQEG 249 LA+ G ++GMDA SF++ D+ E +R+LSGLYGVLKP DLIQPYRLEMG++ G+ G +LY +W ++VT+ + ++++ G Sbjct: 81 LAFTGDVYQGMDAESFTDKDFEVAQEKIRILSGLYGVLKPLDLIQPYRLEMGTKFGVNGRNNLYDFWQEKVTKAISKELKAG 162
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A1G6T767_9BURK (UPF0246 protein SAMN05216345_107140 n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=A0A1G6T767_9BURK) HSP 1 Score: 97.4 bits (241), Expect = 6.010e-23 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 4 LAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQE 246 LA++G + G+DA S S DD AF + +R+LSGLYGVL+P D +QPYRLEMG+R+ A RDLY +W D VTQ + QD+ + Sbjct: 81 LAFNGDVYDGLDAKSLSTDDLAFAQKHIRILSGLYGVLRPMDWMQPYRLEMGTRLDTAAGRDLYAFWGDDVTQLINQDMTD 161
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A800EFA5_9CHLR (UPF0246 protein EYQ00_10265 n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800EFA5_9CHLR) HSP 1 Score: 95.9 bits (237), Expect = 1.570e-22 Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 1 ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDVQE 246 A A+ G ++G+ F+E+D F + VR+LSGLYGVL+P DLIQPYRLEMG+R+ A DLY YW ++ CL+ D++E Sbjct: 65 AFAFSGDVYKGLAIDDFTENDLQFAQDHVRILSGLYGVLRPLDLIQPYRLEMGTRLDTAAGSDLYQYWGSSISDCLMADLEE 146
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Match: A0A5M8A492_9BURK (UPF0246 protein F1599_24340 n=9 Tax=Cupriavidus TaxID=106589 RepID=A0A5M8A492_9BURK) HSP 1 Score: 96.3 bits (238), Expect = 1.800e-22 Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 1 ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLEMGSRVGIAGSRDLYTYWADRVTQCLLQDV 240 ALA++G + G+DA S S+DD AF VR+LSGLYGVL+P D +QPYRLEMG+R+ +DLY +W D VTQ L +D+ Sbjct: 84 ALAFNGDVYEGLDAPSLSDDDLAFAQRHVRILSGLYGVLRPLDWMQPYRLEMGTRLANEAGKDLYAFWGDDVTQLLNKDL 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100970.263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100970.263.1 >prot_H-fluviatilis_contig100970.263.1 ID=prot_H-fluviatilis_contig100970.263.1|Name=mRNA_H-fluviatilis_contig100970.263.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=83bp ALAYDGPAFRGMDAGSFSEDDWAFGSESVRVLSGLYGVLKPTDLIQPYRLback to top mRNA from alignment at H-fluviatilis_contig100970:4..723+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100970.263.1 ID=mRNA_H-fluviatilis_contig100970.263.1|Name=mRNA_H-fluviatilis_contig100970.263.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=720bp|location=Sequence derived from alignment at H-fluviatilis_contig100970:4..723+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100970:4..723+ >mRNA_H-fluviatilis_contig100970.263.1 ID=mRNA_H-fluviatilis_contig100970.263.1|Name=mRNA_H-fluviatilis_contig100970.263.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=498bp|location=Sequence derived from alignment at H-fluviatilis_contig100970:4..723+ (Heribaudiella fluviatilis SAG_13_90)back to top |