mRNA_H-fluviatilis_contig1009.249.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.040e-23 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVI LRNLDKD FEEGVIR Sbjct: 391 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 441
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.720e-22 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVEAFGQK+ATEVK ACLSCVFDETFVI LRNLDKD FEEGVIR Sbjct: 448 GTSDPVVYVEAFGQKYATEVKAACLSCVFDETFVIGLRNLDKDEFEEGVIR 498
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 1.550e-16 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVEAFGQKFATEV + L+ VFDETFVI+LRNLD+D F+EGV R Sbjct: 688 GTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNLDQDDFKEGVFR 738
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A6H5L7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 2.890e-16 Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVEAFGQKFATEV + L+ VFDETFVI+LRN+D+D F+EGV R Sbjct: 758 GTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNMDQDDFKEGVFR 808
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 7.070e-13 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPV +E FG+K + V CLSCVFDETF+I+ RNLDKD+F+E I+ Sbjct: 415 GTSDPVCVIECFGEKRTSSVHNDCLSCVFDETFIINKRNLDKDIFKESSIK 465
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A812YP87_SYMMI (Myof protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YP87_SYMMI) HSP 1 Score: 68.9 bits (167), Expect = 1.830e-12 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 G SDPVV + AFG+K ++ V+ A L+CVFDE F+ + RN+DKD+F EGVIR Sbjct: 120 GLSDPVVTIHAFGEKQSSSVQRASLNCVFDELFIFNFRNMDKDVFSEGVIR 170
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A7S3HPR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPR4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 7.640e-11 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVE FGQK T ++ SCV+DE F+ +++NLDK+ F +G++R Sbjct: 432 GTSDPVVYVECFGQKQNTICVKSVTSCVYDELFIFNMKNLDKETFADGLLR 482
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A7S1XRY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRY6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 9.100e-10 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVI 150 GTSDPVVYVE G+K AT V + VFDE F+I+LRN+DK+ FEE VI Sbjct: 29 GTSDPVVYVEVLGKKVATSVISKQNNPVFDERFIINLRNVDKEDFEEAVI 78
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A2P4XEC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEC0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.260e-9 Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVE FG+K T VK+ LSC +D+ + RNLDK E G +R Sbjct: 392 GTSDPVVYVEVFGEKQQTAVKKQVLSCFWDDLLIFPFRNLDKSEVEMGYVR 442
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Match: A0A0W8D719_PHYNI (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D719_PHYNI) HSP 1 Score: 60.1 bits (144), Expect = 3.270e-9 Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 1 GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIR 153 GTSDPVVYVE FG+K T VK+ LSC +D+ + RNLDK E G +R Sbjct: 392 GTSDPVVYVEVFGEKQQTAVKKQVLSCFWDDLLIFPFRNLDKSEVEMGYVR 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig1009.249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig1009.249.1 >prot_H-fluviatilis_contig1009.249.1 ID=prot_H-fluviatilis_contig1009.249.1|Name=mRNA_H-fluviatilis_contig1009.249.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=52bp GTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVISLRNLDKDLFEEGVIback to top mRNA from alignment at H-fluviatilis_contig1009:23329..23484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig1009.249.1 ID=mRNA_H-fluviatilis_contig1009.249.1|Name=mRNA_H-fluviatilis_contig1009.249.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=156bp|location=Sequence derived from alignment at H-fluviatilis_contig1009:23329..23484+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig1009:23329..23484+ >mRNA_H-fluviatilis_contig1009.249.1 ID=mRNA_H-fluviatilis_contig1009.249.1|Name=mRNA_H-fluviatilis_contig1009.249.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=312bp|location=Sequence derived from alignment at H-fluviatilis_contig1009:23329..23484+ (Heribaudiella fluviatilis SAG_13_90)back to top |