Homology
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A6H5K2K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K5_9PHAE)
HSP 1 Score: 314 bits (804), Expect = 3.200e-98
Identity = 151/238 (63.45%), Postives = 186/238 (78.15%), Query Frame = 2
Query: 488 SYRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPSRPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALPSDPN-MISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
SYRR+YDAAME L+ + L+PYPIP+GL V G+GRN Q+V T I AF++ KFRQ+RAALVETD T +LN VMFP P+YD+PIFGADLV+LPG+HLICIDLQP+ P+Q L + ++EA ++++KALPWGGDLPE AQKFFSP+CLW+K++ E V K + A+MDYL YL LV DA P + + ++EI GHAEYS YRRENDPARGMLTRFYG EWTEAAI ILFDF+
Sbjct: 128 SYRRLYDAAMELLESEIGLEPYPIPQGLGGNCAVVGKGRNLQTVETSITAFRSSKFRQVRAALVETDQATQVLNLVMFPSPSYDLPIFGADLVTLPGVHLICIDLQPAHPAQQLDAKAYEAMREAHKRHVKALPWGGDLPEAAQKFFSPHCLWAKLDPEEAVEQKALDAMMDYLREYLRLVEDAEPVEGDGPLAEISSGHAEYSKYRRENDPARGMLTRFYGAEWTEAAIAGILFDFE 365
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
D7G164_ECTSI (Phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G164_ECTSI)
HSP 1 Score: 312 bits (799), Expect = 1.570e-97
Identity = 151/237 (63.71%), Postives = 184/237 (77.64%), Query Frame = 2
Query: 488 SYRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPSRPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALPSDPN-MISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDF 1195
SYRR+YDAAM L+ + L+PYPIPEGLE V G+GRN Q+V T I AF++ KFRQ+RAALVETD T +LN VMFP P+YD+PIFGADLV+LPG+HLICIDLQP+ P+Q L + + EA +++++ALPWGGDLPE AQKFFSP+CLW+K++ E V K + A+MDYL YL LV DA P + + ++EI GHAEYS YRRENDPARGMLTRFYG EWTEAAI ILFDF
Sbjct: 128 SYRRLYDAAMGLLESEIGLEPYPIPEGLEGNCAVVGKGRNLQTVETSITAFRSKKFRQVRAALVETDHATQVLNLVMFPSPSYDLPIFGADLVTLPGVHLICIDLQPAHPAQQLDAKADEAMHEAYKRHVEALPWGGDLPEAAQKFFSPHCLWAKLDPKEAVEQKALDAMMDYLREYLRLVEDAEPVEGDGPLAEISSGHAEYSKYRRENDPARGMLTRFYGAEWTEAAIAGILFDF 364
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A836CI75_9STRA (Ferredoxin-dependent bilin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI75_9STRA)
HSP 1 Score: 241 bits (615), Expect = 8.560e-72
Identity = 126/236 (53.39%), Postives = 156/236 (66.10%), Query Frame = 2
Query: 512 AMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQP------SRPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
A+ L+G MEL+PY +PEG+E K V G+GRNQQ V + A+ A KFR IRAALVET G T +LNFV+FPDP+ D+PIFGADLVSLPG HLICIDLQ SQ + AL AQ + LPWGG+LP AQ+FFSP+C+WSK+ EVV + A++ YL+ YL + A A P D ++ + +GH YS YRR NDPARGMLTRF+G EW E I LFD +
Sbjct: 4 AIARLEGAMELRPYSVPEGMEGKEAVVGKGRNQQQVKMTVAAYSAAKFRHIRAALVETSGPTQVLNFVIFPDPSLDLPIFGADLVSLPGAHLICIDLQARIRFRKQLNSQYQKSQHTALAAHAQAR----LPWGGNLPSAAQRFFSPHCIWSKVGDIEVVETAALEAMLAYLDHYLAMAAAAEPVKDEGLLKGLAEGHLAYSRYRRINDPARGMLTRFFGTEWAEDVISHALFDLE 235
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A8D6NU85_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=4 Tax=Nostocales TaxID=1161 RepID=A0A8D6NU85_9CYAN)
HSP 1 Score: 219 bits (558), Expect = 1.630e-63
Identity = 115/238 (48.32%), Postives = 151/238 (63.45%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPS-RPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D A+ L+ ++EL+PYPIPEG E KS V G+G+N+Q V T AF+APK RQIRAA V+ +LNFV+FP +YD+P FGADLV+LPG HLI +D+QP R QA + A + + LPWGGD PE+A+ FFSP LW++ + VV V A DYL+ YL+ V A P ++P I++I++ +Y YR E DPARGM RFYG EWTE I LFD +
Sbjct: 4 YQPFLDYAISYLESHLELQPYPIPEGFERKSAVTGKGKNEQEVVTTSYAFQAPKLRQIRAAHVQGGNSLQVLNFVIFPQLSYDLPFFGADLVTLPGGHLIALDMQPLFRDDQAYQDKYTAPILSIFHNYQQHLPWGGDFPEDARPFFSPTFLWTRPKETSVVETYVFEAFKDYLKAYLDFVTQAEPITNPEEIAKIKQKQLQYLRYRSEKDPARGMFQRFYGQEWTEEYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A2T1C7H6_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C7H6_9CYAN)
HSP 1 Score: 218 bits (556), Expect = 3.290e-63
Identity = 116/241 (48.13%), Postives = 154/241 (63.90%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQP--SRPSQALGRRTKALLK--EAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D+A+ L+ ++L+PYPIPEG E KS + G+G++Q+ V T AF++PK RQIRAA V+ +LNFV+FP YD+P FG DLV+LPG HLI +D+QP + + T+ +L E+ +Q+L PWGGD PEEA+ FFSP LW++ + NEVV V AA DYLE YLN V A P +DP +++I + Y YR E DPARGM RFYG EWTE I LFD +
Sbjct: 4 YQPFLDSAIALLQKRLDLQPYPIPEGFESKSALVGKGKHQEEVLTTSTAFQSPKLRQIRAAHVQGGKSLQVLNFVIFPHLNYDLPFFGGDLVTLPGGHLIALDMQPLFRDDPEYQAKYTQPILPIFESYQQHL---PWGGDFPEEARPFFSPAFLWTRPQENEVVETHVFAAFQDYLEAYLNFVDRAEPVTDPQSLADIEEAQLRYLRYRAEKDPARGMFKRFYGSEWTEEYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A6P0TG21_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TG21_9CYAN)
HSP 1 Score: 216 bits (550), Expect = 2.120e-62
Identity = 114/238 (47.90%), Postives = 147/238 (61.76%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPS-RPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D A+ L+ +++L+PYPIP G KS V G+G+ Q +V T A + K RQIR+A V+ G +LNFVMFP YD+P FGADLV+LPG HLI ID+QP R S + + + Q+ LPWGGD PEEAQ FFSP LW++ + E V V +A DYL+ YL+ VA A P +DP + EI++ Y YR E DPARGMLTRFYG +WTE I LFD +
Sbjct: 4 YQPFLDYAIAQLQSHLDLQPYPIPTGFHSKSAVVGKGKRQNTVQTDSYATCSSKLRQIRSAHVDGGGACQVLNFVMFPHLNYDLPFFGADLVTLPGGHLIAIDMQPLFRDSTSYQEKYSQPIMSMFEQHQVHLPWGGDFPEEAQSFFSPAFLWTRPTSTETVQTHVFSAFQDYLQAYLSFVAAAEPITDPAALEEIKQAQLRYIRYRAEKDPARGMLTRFYGSKWTEEYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A1Z4SG33_9NOSO (Phycoerythrobilin:ferredoxin oxidoreductase n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4SG33_9NOSO)
HSP 1 Score: 215 bits (548), Expect = 4.160e-62
Identity = 118/241 (48.96%), Postives = 150/241 (62.24%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPS-RPSQAL-GRRTKALLK--EAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D A+ L ++L+PYPIP G E KS + G+G++Q+ V T AF APK RQIRAA V+ +LNFV+FP YD+P FGADLV+LPG HLI +D+QP R A + T+ +L EA + +L PWGGD PEEA+ FFSP LW++ + NE V V AA DYL+ YLN V A P +D ++ I + H Y YR E DPARGM TRFYG EWTE I LFD +
Sbjct: 4 YQPFLDYAIATLGDRLDLQPYPIPPGFESKSALVGKGKHQEEVLTTSTAFTAPKLRQIRAAHVQGGNSLQVLNFVIFPQLNYDLPFFGADLVTLPGGHLIALDMQPLFRDDPAYQAKYTQPILPIFEAYQPHL---PWGGDFPEEARAFFSPAFLWTRPQENEAVETHVFAAFKDYLQAYLNFVEQAQPVTDSPALANIEQAHLRYLRYRAEKDPARGMFTRFYGPEWTEEYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A846FMC3_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FMC3_9CYAN)
HSP 1 Score: 215 bits (548), Expect = 4.430e-62
Identity = 116/241 (48.13%), Postives = 154/241 (63.90%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPS-RPSQAL-GRRTKALLK--EAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D A+ L+ ++L+PYPIP G E KS + G+G++Q V T ++A K RQIR A V+ +LNFV+FP YD+P FGADLV+LPG HLI +D+QP R A + T+ +L EA +Q+L PWGGD P+EA+ FFSP LW++ +A+EVV +V AA DYL+ YLN VA A P ++P ++EI + Y YR E DPARGM TRFYG EWTE I LFD +
Sbjct: 4 YQPFLDHAIALLQKRLDLQPYPIPPGFESKSAIAGKGKHQHEVLTTSYGYQAAKLRQIRVAHVQGGSSLQVLNFVIFPQLNYDLPFFGADLVTLPGGHLIALDMQPLFRDDPAYQAKYTQPILPIFEAHQQHL---PWGGDFPDEARPFFSPAFLWTRPKADEVVETQVFAAFKDYLQAYLNFVAQAKPVTNPQSLAEIEQAQLRYLRYRAEKDPARGMFTRFYGSEWTEEYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
UPI00188083E4 (phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=cf. Phormidesmis sp. LEGE 11477 TaxID=1828680 RepID=UPI00188083E4)
HSP 1 Score: 215 bits (547), Expect = 5.830e-62
Identity = 113/230 (49.13%), Postives = 142/230 (61.74%), Query Frame = 2
Query: 512 AMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPSRPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
A+ L+G+++L PYPIP G + KS V G+G+ + +V+T KAPK RQIRAA V+ +LNFV+FP+ YD+P FGADLV+LPG HLI ID+QP ++ + L E + LPWGGD PEEAQ FFSP LW++ E V V A DYL+ Y+ V A P SD +S IR Y+ YR E DPARGMLTRFYG EWTEA I LFD +
Sbjct: 12 AIALLEGSLDLSPYPIPAGFDSKSAVTGKGKRETTVTTTSYGAKAPKLRQIRAAHVQGGAALQVLNFVIFPELNYDLPFFGADLVTLPGGHLIAIDMQPLFQTEEYQAKYSGPLMEMFHRYQADLPWGGDFPEEAQAFFSPAFLWTRPAETEAVETYVFDAFSDYLKAYIAFVQAAEPVSDLEQLSAIRAAQLRYARYRAEKDPARGMLTRFYGPEWTEAYIHGFLFDLE 241
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Match:
A0A6P0WU88_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=4 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0WU88_9CYAN)
HSP 1 Score: 213 bits (543), Expect = 2.170e-61
Identity = 107/237 (45.15%), Postives = 147/237 (62.03%), Query Frame = 2
Query: 491 YRRVYDAAMEALKGNMELKPYPIPEGLEEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMFPDPTYDMPIFGADLVSLPGLHLICIDLQPSRPSQALGRRTKALLKEAQRQNLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYLNLVADALP-SDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAAIDEILFDFK 1198
Y+ D A+ LK + L PYPIP+G E K + G+G+ +++V T AF++PK RQIRAA V+ +LNFV+FP YD+P FGADLV+LPG HLI +D+QP ++A ++ + + L+ LPWGGD PEEA+ FFSP LW++ + E+V ++V+ A +YLE YLN V A P +D + +I+ Y YR DPARGM TR YG EWTE I LFD +
Sbjct: 4 YQPFLDYAIPLLKERLPLSPYPIPQGFERKEAITGKGKREETVVTTSYAFQSPKLRQIRAAHVQGGNSLQVLNFVIFPQLNYDLPFFGADLVTLPGGHLIALDMQPLFHNEAYKKKYSDPILPIYQSYLEDLPWGGDFPEEAKPFFSPAFLWTRPKETELVENQVLEAFKEYLEAYLNFVVAAEPINDTQSLEDIKNAQLRYIGYRAAKDPARGMFTRLYGEEWTEEYIHGFLFDLE 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig1008.231.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.20e-98 / Id = 63.45 Expect = 1.57e-97 / Id = 63.71 Expect = 8.56e-72 / Id = 53.39 Expect = 1.63e-63 / Id = 48.32 Expect = 3.29e-63 / Id = 48.13 Expect = 2.12e-62 / Id = 47.90 Expect = 4.16e-62 / Id = 48.96 Expect = 4.43e-62 / Id = 48.13 Expect = 5.83e-62 / Id = 49.13 Expect = 2.17e-61 / Id = 45.15 Sequence A0A6H5K2K5_9PHAE D7G164_ECTSI A0A836CI75_9STRA A0A8D6NU85_9CYAN A0A2T1C7H6_9CYAN A0A6P0TG21_9CYAN A0A1Z4SG33_9NOSO A0A846FMC3_9CYAN UPI00188083E4 A0A6P0WU88_9CYAN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 312.8
Seed ortholog evalue 2.1e-82
Seed eggNOG ortholog 2880.D7G164
Preferred name HY2
KEGG rclass RC01574
KEGG ko ko:K08101
KEGG Reaction R03678
KEGG Pathway ko00860,ko01110,map00860,map01110
GOs GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007
EggNOG free text desc. phytochromobilin:ferredoxin oxidoreductase activity
EggNOG OGs 28QRX@1,2QXET@2759
EC 1.3.7.4
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000
Hectar predicted targeting category other localisation
Exons 8
Model size 1874
Cds size 1083
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929022.6504529-UTR-H-fluviatilis_contig1008:8869..8990 1622929022.6504529-UTR-H-fluviatilis_contig1008:8869..8990 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig1008 8870..8990 +
1691135153.428367-UTR-H-fluviatilis_contig1008:8869..8990 1691135153.428367-UTR-H-fluviatilis_contig1008:8869..8990 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig1008 8870..8990 +
1622929022.998474-UTR-H-fluviatilis_contig1008:22136..22806 1622929022.998474-UTR-H-fluviatilis_contig1008:22136..22806 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig1008 22137..22806 +
1691135153.55904-UTR-H-fluviatilis_contig1008:22136..22806 1691135153.55904-UTR-H-fluviatilis_contig1008:22136..22806 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig1008 22137..22806 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929022.6716673-CDS-H-fluviatilis_contig1008:8990..9098 1622929022.6716673-CDS-H-fluviatilis_contig1008:8990..9098 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 8991..9098 +
1691135153.4419754-CDS-H-fluviatilis_contig1008:8990..9098 1691135153.4419754-CDS-H-fluviatilis_contig1008:8990..9098 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 8991..9098 +
1622929022.6907907-CDS-H-fluviatilis_contig1008:17413..17632 1622929022.6907907-CDS-H-fluviatilis_contig1008:17413..17632 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 17414..17632 +
1691135153.4661117-CDS-H-fluviatilis_contig1008:17413..17632 1691135153.4661117-CDS-H-fluviatilis_contig1008:17413..17632 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 17414..17632 +
1622929022.7109306-CDS-H-fluviatilis_contig1008:17970..18135 1622929022.7109306-CDS-H-fluviatilis_contig1008:17970..18135 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 17971..18135 +
1691135153.4837291-CDS-H-fluviatilis_contig1008:17970..18135 1691135153.4837291-CDS-H-fluviatilis_contig1008:17970..18135 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 17971..18135 +
1622929022.725348-CDS-H-fluviatilis_contig1008:18721..18840 1622929022.725348-CDS-H-fluviatilis_contig1008:18721..18840 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 18722..18840 +
1691135153.4961774-CDS-H-fluviatilis_contig1008:18721..18840 1691135153.4961774-CDS-H-fluviatilis_contig1008:18721..18840 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 18722..18840 +
1622929022.7378125-CDS-H-fluviatilis_contig1008:19419..19554 1622929022.7378125-CDS-H-fluviatilis_contig1008:19419..19554 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 19420..19554 +
1691135153.5231032-CDS-H-fluviatilis_contig1008:19419..19554 1691135153.5231032-CDS-H-fluviatilis_contig1008:19419..19554 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 19420..19554 +
1622929022.9433482-CDS-H-fluviatilis_contig1008:19919..20019 1622929022.9433482-CDS-H-fluviatilis_contig1008:19919..20019 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 19920..20019 +
1691135153.5330448-CDS-H-fluviatilis_contig1008:19919..20019 1691135153.5330448-CDS-H-fluviatilis_contig1008:19919..20019 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 19920..20019 +
1622929022.9627059-CDS-H-fluviatilis_contig1008:20869..21006 1622929022.9627059-CDS-H-fluviatilis_contig1008:20869..21006 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 20870..21006 +
1691135153.542372-CDS-H-fluviatilis_contig1008:20869..21006 1691135153.542372-CDS-H-fluviatilis_contig1008:20869..21006 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 20870..21006 +
1622929022.9788105-CDS-H-fluviatilis_contig1008:22036..22136 1622929022.9788105-CDS-H-fluviatilis_contig1008:22036..22136 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 22037..22136 +
1691135153.5508971-CDS-H-fluviatilis_contig1008:22036..22136 1691135153.5508971-CDS-H-fluviatilis_contig1008:22036..22136 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig1008 22037..22136 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig1008.231.1
>prot_H-fluviatilis_contig1008.231.1 ID=prot_H-fluviatilis_contig1008.231.1|Name=mRNA_H-fluviatilis_contig1008.231.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=361bp
MGQEQRVNMTRPRHAVHRRACAVIVAFALIGAVQNQAAAFVSAPLRAPTV RHFNGFRNENINGESRRRQDVKNKHGFTPAQRPRYHEQHCNTAAAADAPA PEASGHADAGKEAAQAASAAVRSYRRVYDAAMEALKGNMELKPYPIPEGL EEKSTVFGRGRNQQSVSTKIMAFKAPKFRQIRAALVETDGLTHILNFVMF PDPTYDMPIFGADLVSLPGLHLICIDLQPSRPSQALGRRTKALLKEAQRQ NLKALPWGGDLPEEAQKFFSPYCLWSKIEANEVVVDKVMAAVMDYLEVYL NLVADALPSDPNMISEIRKGHAEYSNYRRENDPARGMLTRFYGYEWTEAA IDEILFDFKG* back to top mRNA from alignment at H-fluviatilis_contig1008:8870..22806+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig1008.231.1 ID=mRNA_H-fluviatilis_contig1008.231.1|Name=mRNA_H-fluviatilis_contig1008.231.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=13937bp|location=Sequence derived from alignment at H-fluviatilis_contig1008:8870..22806+ (Heribaudiella fluviatilis SAG_13_90)CTTACAGAAAAAAATATCCGATAGAAATATCATGTTCGGTCGCTCGAACG
TCGTGCGCACAGACAACTTTTTTGGCACTCATCACACGACAGGCACGCCG
CACGGGAGGTAAATATAAAGT ATGGGACAGGAACAAAGAGTGAACATGAC
GCGTCCAAGACATGCTGTTCATCGACGAGCCTGCGCAGTGATTGTGGCGT
TTGCGCTCATTGGCGCCGTTCAGAACCAG GCAAGCCTCTTAAGCCATCAT
GGTCTGCTTCACTCCCTAGACCGATGTGTCATGTGTCGTTAACAATGCCG
TGCATGTCAAATTGATCGGCTCTCTTCTGCAAAATCATGGTCGAATACGA
CATAAATCTTTCGTGAGCCTACCGTCGCCGCCCCCGACTAACGTGCAAGT
GAAACTCAACGTAATTTTCCGTGTAGTTTTGACAGAGGCAGTTTTGCAAA
CATGTTTACCTTATGTGCGCCTGAGATTTTTTTAACGGCCAGAGACGCGA
GAAAATACGCTGACGTGAAAACTGACGAAGTCCTATTCCAGGGAAGCGGC
CAGAAGAACCTGCGGCATCGTAGTCGCGATATCCGGTTCTGGCGCTACAC
GAATGTGCTTGTAGTGGTCCATCCCTAGGGACCGTGTGCAATCAAGTTTA
GGCGCCTGACGACGAAGGGTGGTGTAATATAGTGTCAAAGGTACCAATTT
GTTCCGGCATAGGTTTAATTTCCATCAGGATGCGGGTCGTACTGCACTTT
CGCTCGATATTGGCTGCTACTCTGAGCTCAATAGCGCACTTCGAAATACC
AAAAGCTGCTCCTTATGGCCGGAGAGCTGATGCGTGATTTGGTGCTGGGG
TTATTGTTAGCCGTTACATGAATCACGAATGAAAGAAAATAAACGTTGTT
GCGCCGCATTTTCTGGAGGCGGTGTCCCTGTATGCCTCCAATCGGGATGC
GTCCGTTGCCACGGTTTCCTCCTTGGTCTGGACTTGCTATTGACACTTCC
TGGGTAACGCTTCTAAGACAGAGCAGGGCTGAAAGAGCTGCATGTCATGC
ACACCCTCGAATTTCGAGGGTGCCCGTCTGTTTCCTCACCACGTTTCCTG
GTCACACGCGCCGTCCGGTATAAGATACTGTACAGTACGTGCGCAAACTA
CCCTATCATGCGTAGCTGGCAGGGCCGACGCACTGTACGTTACAGCGAAA
ATTGTGATGTCGCTTGAAGTCACACAAAAAACACTCCAACAAAGCCAAGC
CAAGTTGTCCTTCATGACTAACGTACACCCTCTTCCTTAAGTTGGCCTTC
TTACCATCAAGTGGGGTACCAATGGAGCTATGAAGAAATCCTTGACCGGT
ACCACGTTTTACATAGGATTTCCCAGACGACAGCTGATCTGATGCTCTAC
CAATAAGAGACACGTCTTGAGATGGGATGAGCGTGGCAGGAACTGAAAAA
GCCCTGCTTCAATGTGAAAGTATCAGGCCGTTTTTATCGCGGACATCTCT
TTTCGAGCTCGACTAGAGCTATGTGTGAGGACACGCAAAAAGGTATGAAG
ATAGAGTGTTACGTAGTTTGTTTTTGTTTACCGATACGTAGTTTGTTTTT
GTTTACCGAAAATACCTACACAGGAAAAGGAACACGGTGGCGACATTCCA
CGGTCAGGAGGAAATGCCACTCCCCCACTGGCGATTTTTTTCCCCTTCCA
AGGACATGCGAAGAGTAGGGTCTGCGGTTAACGATAACAACACCGACATT
ATTCTTAGGAGTTTCATTTCTGCCCGTGGTTTCGACGTCGGAGCACGACG
CGTCGCTGCCCATTGGAAACTTTTGACCCTCATCCATCCCTCGTTGTGAG
CGTTCAAAGCCTAGATCTACATTCACACGGCCAAACGCCTCTCGACCAAG
AAAATACGTGCAGTAGTCCGAATTGAAGCAACAGCGGGTCGTGGATATTT
CTAGCATCAAGTAGCATACCGTGTGGAATTTTCCGCCGGCCTTCCTCGCA
CTACACAGAGAAAGTACCGGGGCGAGGTGCTTTGAGTACACATTAAAAAT
ACTTCTTTCACTGCAAGACTTCGAAATTTGGGTCCAAACCCCATTTTGCA
CTCGAGAGTGCTGTGCTGTCTTCATCGGGCGCTGATATTCTGTTTCCAGA
CATCTGATGTGAATGTACGACTACGACTCCGACGCAAGACGCCAACAGCG
CGCCGAATGTTCGTGCGGTCAAAACCAGCCCTGACGAAAAAACAGTTTTG
CGAGTGGCGGTCGCCATCGTTCCAACGACCCGGAAGGTGATGCCCGTGCG
CGCCCCTTCCCGCTTCATTACCACACTATACAACGGAGAAAAACGTTAAT
GCCGTCGCCACAAACCTTGCTGCGGCGGCGAATTTACCTACCACAGCAAC
TCGTCAAACTCGGGATCTCCTTGTCCTTGTCCGAATCAGCTTCTGAATTG
CTCCAGTATAACAGGCACTATCCAATGCCAGCGAAAGCTTCAACACCGCG
GAGGGAGGTCCCTTCCTGGAGAGATCCACCGTGCCCTTGTACGCACTGCA
CCCGTTTGAGTTTCTTCTCCCTCTGCCCAACTTCCACCCCCGGATAGTTT
TACTAGAACTCACATCCCCGGCACCTTTCCGTTCGTCACTGGATGTCCGC
GAGCCGCTCATTTAGGCGCCACAGTATCCTCTGTCCCCCTGCCTCCCAAT
TTCCACCCTACTGCCCTCCCCGGATTCCCCAGCACTCCCGATTTCAACCC
GCCGCGCTCCGCCGCCCGATTCCCCTCTCTCGCGCCCATCGCTCCCTTCA
CTTTTTTCCTCGCGTCCCGCCTTGGAAACCCCGCCTCACGTGCCCGCGAG
CGAGGATCACCCGCCGCTACTGCGCTTGATGCCTCCGCGCCTGAGCTCTC
CTCTCTGTCCGTCCCAGTCCATTTAGGGGGCGGAGCTAGGCAGCAGCACC
CCTTGCATTTTCGGCTTAGAAAGCACTTGCCCACGCATCTGCAGTTTTCG
GTTCTGTGACTACGGTTAGATGCCTTCTCCGGATCGCAATTGAAGTGAGG
GTTCGCGTTGTCCCTTCGCCAGCGACGTACGCGTGCCTGGACAGGTTGAT
GACGAAGTTGTCGTGTGCCAGCTCCACAACATCCCCATCCCTGCGCCCGC
CGCTTGGTCCCGCCTTGTAGCCTCTCTTCTTTGTGGCCACGCTCCAATTC
AAGCTTTAAAATCTACTTCCGGCATGCCTGCAAGGAGCCTCCCCCTGCCA
GTACTCCAAGACGGCATCGCTCTTCGTCACATGCAGAAGAATGCTGTCCT
CGTCCGGACAACAACTGGTGGGGTTGTGGTCATGCAACTCCCATATCGCC
CGGCCGACCTTGTTAGCAAATAGTGTCGTGTTGCCGCCGACGCTTGCTAA
AAGCTTCCCCGGGTCTTTTCCTGCCTTGGTCTACGCATTTTCGTGTTTGA
AATGGAAAATGGTCGCCAAGAGCTTCACACCTTTGTCCATGTCCACCGCA
AGCCAGCACGGGGTTCGACAGGTTTGACTGTGACTGCTGCCGGTGTCGTT
TGGGTCGCATCTCGACTTGAATCTGTTATGGGGAAACAGAGCACGCTCGT
GCGATACAGGGTGTTTTGGGGGCACCGGTGTCATCAGCCGGTTACAAGTA
ACATCTGCGTATTAAACGGTACCTTCGTAACTGAAGGTAGTTTCTCAAGA
GGCTACGTGTGGGGCGATTACGGCAGAGTTCAATCTCCTGCAGATCTTAG
TCCTATCCTTTTAGCGCATCGCATGATGTCTCCGAGGACGCTAGACGTGA
CTTTCAAATAGACTATGATATAGCGAGCCATTCGCAGGGTCACAGTATAA
AGCGCTTATCCTTGGACATCCATGGCTCAATCTTTGAGACAGCGTATGAC
TACTGGCAGATTCAACCAGATTGCCAACTTGATCATTGCGGCACTCATTT
TTTTTTGCGACCGCCGACGAACGAAACACTCAAATGCACTTTACTGAGCG
GGTGAAAACTTACACACGCACCTAAAAGTTACAGGTGGGACATGCGTAGG
ATGATGGCTAGCTCGGTGCGGCGGCAACGTGGCCGGGTTCTTGCTAAAGG
TCTGCACAAATAGTAGTCGCTGCCATCTATTAGACTTCATGAACGATGCG
TGAATGGCCCATTGTTACCTGATTACATGCCTCGCGACTGCACTGAGTGG
CACGCCCTTACCTCTGGTTGAACCTTGACCAGTTCGCATGACGCTTCGGC
TTGCAAGCCTCATGCTCCAACCGCTGACTATTGTGAATATCTGGAAGGAA
CCAATACACTGGTCAAACCCTGTCAAAAGCGACTGCATGGCATGAATGAA
AGAAACGTATCACTGTCAGCAGAGCCCCAATCCTCGTCGAAGGCGCCGCA
CAGATTGTTGTGCAGGGTACTAAAGAAGCAACAGTATGTACTGTGATAGA
CGAACAGAAGCAACGGCTACATGCTGTTCGGTACTGCTGTAAGTCCGTAC
TATACTGTATCATCATGCGAATGTCGTAAAGTTGTTGCACTGCATTTGGC
GCTGTCTGCTGTCCTGTAAAGTCAGGGTATGCGCGCACAGTGGTATTAGA
TTTTGATTTTAGAGCAGAAGATTGCACCATGGGTATGAGCAATTTTTTTT
AACTTTTGAAAACGTCGGTCACGTCTATTGCCATCGATGCATGAATGTCG
TGGATCTTAATGAAGTACATACCTCATGATCCCTAGCGCACGGGCATCCG
ATTTTTTGTGGCGTTTCATCCGTGGCGCCACAGCCGTAGCCGCTCTAAAC
ATCACGGGACGGGCCAACATGAGACTACAGTGGTGTTTAATCTGTATTTG
AGTACAGAAAAGGTCACCCATGGATGAGAACATTTTTTCAAACTTTCGTC
ACGTCGTTGATTTCCGTCAGTGCGTGAAAGGACGTGAAACTTTTTGCACT
AGATAGCTCATGATCCCTAGCGCACGGGCGTCCGATTTGTTTATGTCCAC
AGCCCGTGCCGCCAGTGCCGTAGCCACTCTCAACATCATGGGACAGGTCA
ACTTGAGACTAGAGTAGTACTTCCTATGTATTTGAGTATAGAAAGATAAA
ACATGGATGAGTGCATTTTTTTCAAACTTTTTCAAACTCCAATCACGTCG
CTAGTTTGCGTCAGTGCATGAAATGGCGTGAAACGTTTTGCACTAGATAG
CTCATGATCCCTAGCGCACGGGCATCCGATTTGTTTGTGTCCAAAGCCCG
TGCCGCCAGTGCCGTAGCCACTCTCGACATCATGGGACCAGTCAACTTGA
GACTACAGTAGTACTTCTTATGTATTTGAGCATTAAAAAGATTTAACATG
GATGAGCGCATTTTTTCCAAACTTTTCACACTTCAATCACGTCGTTAGTT
TCCGCCAGTGCATGAAATGGCGTGAAACGTTTTGCACTAGATAGCTCATG
ATCCCTAGCGCACGGGCATTCGATTTGTTTGTCTTCAAAGCCCGTGCCGC
CAGTGCCGTGGCCGCTCTCAACTTCATGGGACGAGTCAACCTGAGACTAC
AGTGGCATTTCTTATGTATTTGAGTATAGAAAAGGTTAACCATGGATGAG
CGCATTTTTTTTCAAACTTTTTCAAACTTTAATCGCGTCGTTAGTTTCCG
TCAGTGCATGAAACCACGTGAAACGTGTCGCACTAGATAGCTCATGATTC
CTAGCGCACGGTCACCCGATTTGTTTGTGTCCAAACCCCATGCCCCCAGT
GCCGTAACCGCTCTCAACGTCATGGTACCGGTCAACCTGAGACTGTGAGT
GGAACACTGACGACCACAGCTGCCTGCCTTACTCATCGCGCAGTGGCTCA
TTCTGCCCCAGGCCTGCTGCAGTAGATCTCTGTGCCTGGCGGTTACACTT
GAACCGTACTCGTTGCTGCTTGTGCTTGCCGGGTGACATAGTTCGGCACA
CTTCCTTGCATCGTGGGTTTGCAGCACAGCCTGCCGAAGTCGGGATTTCC
GCGAATCTCCTGGTTTCCCGCGAAGGCATTCTTCCGGCGCATTACAACAA
AATCGGTACCGGTTTTGGAAATGACGAAAATAGGACGGGAACGGGAAACC
AGTTTCAGCGATTCAATCACGGTACCGGGGATGGGAGATCAATCTGGCGC
TTACCAAGCACGATATGGGAATGAGAAGTCAGTCTGGCCCCTACGAAACG
TGGGAAATCAATTTGGTCCATACCAGGCACGGCAATACGCGAATGGGAAA
TCCATCTGACCCGTACCAAGCGCGGTCCAGGAATGGGGACTCCATCTGCC
GCGAACCAAGCAGTACGGGAAAAAGCTGCCGCGATTTTGATTGATTGTAT
GCGACGCGGTGTGTCACGGTGCCGATGCATGCTACCAGAATTCGAATGTC
ATGTTTCGAACGAAGGACGACAGCGACGCGTGACTAGAAGAGAGTGTCCG
AAGCTGTTCCGTCGGGGGGGCGATCCACGGTATACACGGTTTTTAGTATA
AAATGCCAGAAAAGAATGTTCATGTTTCCATGTTTTCGATGATATGTCCT
TGCTAGCCATATGTTGTTGCATGCTTCGAATCATGAATGATGACAATGAA
GGTACATGAAAAGCAATGGGGCAATGGCATCACTTGTACGTAGACTACCT
TGCTCTCTGAATGAACGAGTCCGTCAGGTAGTAGCTGTGCCACACTACTC
CTGTGGTTAAAAGATATGCTTGAACAATAAAATATTACTTTGCATCTACG
GTCACCCTAACCCGAAATACCCATCAAGAACCGAGCCGAACCCACAACGT
TTGTCCTGCAGTACCGTCGATAGGTGTTGCGCGTAAAAGTTTGTCAGGCG
CAACAGTATGCATGCCGCAAACCAACCTACCTATGGAATATCGCCGGACG
TTCAATGAATTTGATTTTCCACATGTTCCGGCCGCAGTTTCAACAAAGCA
ACATTCAAGAAAGATTCGAACATGTGTGATCAAGAAATGGCTGCTGTGTA
TTTCACAGATCCTAGGTATAATACATTGATCTTTATGCATATTTTCGCGA
TTTTGCTGTGTAATTTCTTGACTTTCAGATCGTACTATACAGGTACCAAC
CGGAGTCCATGAAGTTGGGAGGTTTTCAATGTGTGGTTGGTACGGTACTG
GGAATTGCTGTTTGCGCGACCGCGGTACGCCGCACTGGGAATTCGCAGCT
GGGCATTTGTGAGTTGCCTTTCCCGCGAACGGTGCGGTACTGGTAAATCG
ACTTTGTAACCGTACCAGTACCGTTCCCACGTGCCGTGATTTTACCGTCA
TAACATTACCGGGGTTATTCGCTAGGATGCTACTTTTTTTGTATGTTTTA
TCAGTGAAGGCTTGTAGAGCTCTTACAGGGCGTTCTCAAGTTTTGTATTG
TTTGCCATCGGACAATACTCCTGTCTTTCGACAAAAATTTACGCTACATC
TATTTAGCTCCGATTTCGATTTCGATTGGCATTTGGGTCCAGTATTTCGC
ATCGAAAGCGCGATATATCTTGGAGGCCGGGAATGACCAAGTATAACCAC
ATCACCCTTTCAAAAAATCCAGCAAATAGTTCAAACGTTGGCCACGAGAT
ATCCACTGCCCTCGAGAGAACTTACGATAGCCCGAGCCGTAGTTCGTAGT
TAACCACGTACAGCCTGCTTGGTTGTCTTGAATGTGTGCAGAAATCAAAG
AGTATTACATTTTGGGTTTGAACGTGCCATGCTACAGAGCAAAAATGGTG
CCAAACGGAACCATTCGTAAGGGAAAATTACAACACACTTTCACGCAGAT
TGCGTCTGCTCGCCTAATATAAGATGGATTCCTCCCAATTCAAAGCATGT
CGTATTCTGTATGTGTATGGCTACGTTTTGAGCTGTCGGGCGACTACTGA
AAGTGTCTGCGCATGCTTCCGTATACGATGTAATGTGAAGCACTCAATTT
CTCCTTCCACAACCATCGAAAGCATCACAAACCATGGACAAAGCGTCAAC
ACCATGGACGAAAATAGATCGGTCGTTGAGTGGGTGTCATTTCTTTGTTA
CGCCGAACTTAGATCGTAGGCAGTCAACTTTATGATATCCATCAGGATGA
CTCGTCATGGGGTTTCAGAACGTCAAAAGTGTACAGAAACGTCTATGTTG
CTTCTCAGATCAGTGGGCCATTCAACGCCCGAAAGGTTATACGACTCACG
ACTTAGATGGTGCCCGATTGCAGTTAAGACGTCCTAATACTCGTAATCAA
GTTCACATTCCAGGTACGGTAATGTGTGCCGACGTCGTCTTGACTACTGG
AGTTCAGCCTTCCAACGGTGGACGCGTTATCGGAACACGATGGCGAAGGA
GGCTAGTTCCCTCCGTTGTAGGGGTAACGCAATGACCAAAATCAGCATGC
CAGTTTTGGGTTGCTGCAGCTAAACTACAGATTCCGAGCACGTGTTTAGC
GTCCTCCGGTTATTGTTTGACACAGAGATGACTGTTGTAATTCACTCACC
GCACGGCTCGACGAATCAAATCGTATCGTTTTTTTGGTGCACAGGCAGCA
GCGTTCGTGTCAGCCCCCTTGCGAGCACCAACCGTACGGCATTTCAACGG
ATTCCGCAACGAAAACATCAACGGCGAGAGTCGACGAAGACAGGACGTGA
AAAACAAACACGGCTTCACGCCAGCACAACGGCCACGATATCATGAGCAA
CACTGCAATACGGCGGCCGCGGCAGATGCACCAGCTCCAGAAGCCTCTGG
CCATGCGGATGCG GTAAGTTCAAAGGATTTCATTCACTGCAGGACATGTC
GCTGGTAGTCTGAATGGCGGGTTACACCTACTGCAACGCATTCCAAAAAT
GAGTGGACGACCCAAGGGCTGGCAGATATCCGCTCGAACCCGGTGCTGTT
CTTTTGCGGTATCTGCCACTGTTCTGCCACCGCAAAGATGTGGTCCGACG
AAGAGCACGCAACCCGCCCAATCAGCATTGTCTGGTTTGCATCCACATTG
AGAGAAGGCCCGGCGCGCACCTTCAAATCGCACGATGAGAGGCGGTGAGC
CCTTCGTCTCAAACGAGCTCATCTTGCACGCAATATATTACGGTTTGTTA
GGGGAAGGAAGCCGCGCAGGCGGCGTCAGCGGCGGTGCGATCGTATCGTA
GGGTGTACGACGCTGCAATGGAAGCGCTGAAGGGGAATATGGAGCTGAAG
CCCTACCCTATCCCCGAGGGACTAGAGGAGAAATCCACGGTTTTCGGCAG
GGGAAGAAATCAGCAG GTCGGTTGTGCGTGATGGTGCTCCAAGCTTGCGG
GTGTTCTTATGCGGTCACGCTGACTCAAATCGTGGTAGTCTTGCCGTGAC
TGACATGGAAAGTTTGCAGTCTTGCCGTCCGCTTAGATTGTCGTGGAACA
CGCTGCCGACGAAAAGCCTCGGCCGGTGGAGGAGGTGCCGGCTGAGCCAG
AGGGTTAGGTCGGTTCGCCAAATTTCGGCAGGTTAAGCGCTATCATCCAG
CCCCAACCAACCTCTTTGCCTGAAGAGCTCCATGGCTCTCCATCTCTCTC
TCTCTCTCGTTCTCTCTCTAGTTCGGCGCTGTTGCAGCGCCATTTTATGA
TTGCCTCGAGTCTCTCGAAATGTCCTGTGCTTCAAGCGCTCCCATGGCTG
CTGTGCAGCTTCATCAATAGCCGACAGCAGCTGCTAATGTTCGATCCTGG
ATAAGCTTTGCTGTTGTCTGTTTTTCCACGATTCTGCTCTCATTTGTTTT
TGTTACGCTATCTCTCTTTCTTCTACTTTTGCACGCCTACTCTGGTTTAT
CGCTTGTCACCCGTGCCCGTTGCGCACAAACATTTCGTTTGTATTTTGTC
AGAGCGTCTCCACGAAAATCATGGCGTTCAAGGCACCCAAGTTCCGCCAG
ATCCGAGCGGCTTTGGTGGAGACGGATGGACTGACACATATCTTGAACTT
CGTTATGTTTCCGGACCCCAC GTGAGGGTAACGGATGTGTGTTGCCATTT
CTTGAGGGAATCTAGGCTTTTCTATCGTTTTTGGGGGGCGGCCCGCAGAA
TGCGTCGCCTGCAATGGCTTGTTTGACTGCTTGTAAGGGAAGGAGTGGGA
TCTACATTGCTTCACACACAAAGCGGAGTTTTACACACCACTTCCGCGTC
CAAGATGGGACCTGTAGCACGTCCAGTGCACTCATGTTTGCGTCGTAGGA
AAATGGGGTTTTTATGGGCGACAGAGTGCTCGCCGTTGTACGTCACGTTG
TTAGGTGGCGGTTTCTGGAGGGTGCGGCAGTTTTAGTTTAGAGAGACAAG
ACGTGGCAGCTTTGAAAAAGATGGGAAGGTACGTTCTCAAATCAAAACGT
GGCATACGCTATTACACCAAAACGACACTTTCTGCCCACAGGGCACGTCA
TGTCGGTGAAATGTTGCCGATACTATTCTGCAGATCAGCGAGACCGCATA
TTCGAGAATTGTGAGACACTGTCACTTACGCCCACAACTTTGTGTTTTGT
TACATTTGGTTGACGTCTGCTCTCGTGAAACGACGGTAAACAAACAATAG
GTACGATATGCCAATCTTCGGAGCTGACCTGGTGAGCCTTCCCGGGTTGC
ATCTCATCTGCATCGACCTGCAACCGTCACGTCCGTCACAAGCGCTGGGT
CGTCGCACCAAAGCCTTACTGAAAGAAGCCCAAAG GTTAGGAGCGTGAGC
ACGCACGATTTAGATGTCCTATGGTATCAGCGGCCATGGACGTTTCGTCC
ATGTGACGTCGAGATGGTCCATGCCAAGTTTACGTTGCACCAATGTTGAG
TCCTTCGACACGGTCGGTGCATTAAGCCTTTGTTTTTTTAATTCATCAGC
ACTGTTGATCTATCTGACAGCGGAATTGGAGAGGTGACGCGGTGGCGGTG
GGTTGAGGGACTAGTTTACAACTTCGTCTGCTACAAAGATGTCTAGACAC
CATTCCCCGGGACATGCATCGACATCACCCTGTCGTGAATTTGTATTCGC
TGTAGTTTTCCTGTGTGTCACGTGATATCTCGTGTTTCTGCATGTACCAG
GCAGAATTTGAAAGCTTTACCGTGGGGTGGCGACCTACCGGAGGAAGCAC
AGAAGTTCTTCTCCCCGTATTGCCTCTGGTCCAAGATAGAGGCGAATGAG
GTACGCGACTTGCGTGGTCTTTGTCTTACATGGTGGCTCTGCAGAAGTGA
GCACCGTTGCGCTGCCTGTCCTGCTTGAACGTGTTGACTGTTGCACCGAT
ATTTTCTGCTACCTGGATATATGTTTGGTACATACTGTGTGTGCTTCACA
ACACAATCGTTCGACCGGGTCATGCTTTTTGCCCGACCGATTTGCTTCTT
GTCGGTGTACAGCACCAGAGGCTGTCGAGGCAGCCATGGACTTGATGTGT
TGGGGTATAATCATATCTGTACTGCTGGATACACTGCCATATTCCAGGAG
ATGGTGCGCAAACACCCTGGAGCTTTTTCTCGTGTGCAACTATCGTGGTA
GGCTTTGTATTTTGGGCCCATGCAGTATCATTTGTTTTTGATTTGCAGAG
TTCGGAATACATTGCAGTTCCACAAATGTGTGCTATCCGCCTTTGTGCAG
AATTATGGAAAGCGTGCAGATCGCGAGTGCAGATTTCGGGTTTGTGCAGA
TTCCCAGCCCAAAGTTGGAATTTTGAAGTCTGTAATCTGCAGCATGTACA
GAGGAAGCTGCTAACAGTGGCCCTTGGTCGGCGTGTGACAGTTTTGTCTT
TGAGGTTACAGCACGCCCTCCTGTGTTGTCACAGGTGCATTTGCTGTCCA
CAGCCCCGCTCACGCCGCATACGATACGACAACTAGGGTCAGGTCGGACC
TGCGGCCGCAAAAATCTGGTGTAGTTGCCCATGTACATGATATGTTCCTG
TAATGCGGCGCAGTATTACATCGCTATGCCGGAACGCTACTTCAATCATG
ATTCTCGCTCTGTTTTTTTACCGCCTTGTTTCCTTACTTGAAAACATCAG
GTGGTTGTGGACAAGGTAATGGCGGCGGTGATGGATTATCTGGAGGTGTA
CTTGAATCTTGTTGCGGATGCTCTACCGAGCGACCCAAACATGATCTCGG
AAATCCGAAAAGGGCACGCAGAATATTCCAACTACCG GTGAGAGTATATT
CAAAAACGTATTTAAAGTGAACGAAATGACCGTTGATGTTGCATCTGACG
ATACCTTTTGCTCGCTCCTCGTTTGTTGCGCATGCAGTCATCGGAGGGTA
ACGTATTGCACTCAAAAACGCGAATCGTGACTGCGGTGTTTGGAGAGTTT
GGTCTACAGGTCTGACGTGTTGAAGAACGTGGTGTTGTTGATTGTGTTCG
AGAGTTGCATGCTTTCGCCGTCTGTGGCGTGAGTTTGAAACTGGACGCCT
ACGCTATGCTGAAGTCGTCGAGCCCGCAAGGTATAAAGGGAAGGGTGCCC
GAAGCAGCTCAGGCGAACTGCTGATCACTTGGTGCTGCAAACCGCGTATC
GATTCTTGTAATTTTGCCGCCCGAAATGGAGGGGTCGGGATTGCACTGGC
GAGAATGTATGGTGTTCGGGACTCTGAAGGAAGGCGGGTAATGAGAGCAG
CACCGTTTGACTGCACGTAACGCGGTGGGCAATATTTGCTCCATTGTCGA
TTCGCTCAATAGATCCTGCTGGAGATTGCTGCTGCGAGGATATGTGCCAA
ACATAGGTACTTCTCGTTACCGGATATTGCGTCTGTAGAGAAAGCGGTCC
AACCATTGGACCATAGAGTCATCGCTGACTCTACAGGCTAATGTTGGATC
GCTTTATTTGCACGTCCATGGCTTTGGGGTACAGCACTGTCAGACAATTC
GCGAACTCGTGAGGTGTGACGTCGACAATGCCGCGGGCACGAAAGAAGCG
GAGGGTGTGGGACAACGACAACAATATTACTTCATCATATTCTAGTAGGC
GCGGCTTCGGCTTGAAATTGTCTGTGTTCGTCGAGATGCGGTAGGTTTGG
GACTCAACAATTTTGCCGGTCTTATTGCGCCTGTTCCCGGTGCTCCTTGC
ATCGTAATTTAAAGCATCACTCATAGAAACAACTGTGGGCTGCTGAATGC
TTGTGCTCATATGATTCCTCTCCGCACGACGTTTGCACGCCCCTCCTCCC
TTTTCCCCTGGTGTCAGGCGGGAGAATGACCCCGCCCGAGGCATGCTCAC
ACGCTTCTACGGATATGAGTGGACGGAGGCTGCCATCGATGAAATTTTGT
TCGATTTCAAGGGATGA AGGGATGGCCAGAGGAAACTCATATTATATCAG
TCAATACAACTGCAAAGCTACAGGTTGAGAGAGAGAGACAAAAGTTGCCC
GCAGCTTTCTTGTTGGTCGTCATTTTGAAAGGTACAACAACGAAAATTAG
ATCCGTAACATCCCTTACGGTGAATGTGGGGCCTTGCCACGCTAATGGCG
GCGGTGTGACCAGGAGCATTGAACTGGAGTGAGGCATGACGTCTTTTCCT
AGGAATCTGTACCATCTCGGCAACGGTTTTGTGTCCGTTAGCATAAAGAC
ATGCCTGATCCCCACGCGAGGTGCGTGCGACGATTCTCATTTTCCACCTG
CCCGCCGGTTCAAACGTTGAAAGGTCGGGGACCAGGGACACAGAAGGCAG
GGTTTGGTTAGGCTGAGAGACAGAAGACAACGAGCAGGTGGCTAGCGGGC
AGGAGAATGGTCGAACAATCCGGAATTCTGCAATCTAGTGGAGAAAAACA
TGAGAAAGCGTTCGCCCCATATTCATCTCTTGTTGCTTAGCACAATAGGT
ATAAGCAGTGCTTTTCACGTCCCACTTAGTAAGACGTACCATGAAGAATC
TCGTGAGAAATCTCATGAGAAACGCGTCTCGCTCGTCTCACGATTATGTT
TTGTCCTATTCTGGTCTCGTCTCAATAGCTGCCGGAC back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig1008:8870..22806+
>mRNA_H-fluviatilis_contig1008.231.1 ID=mRNA_H-fluviatilis_contig1008.231.1|Name=mRNA_H-fluviatilis_contig1008.231.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=2166bp|location=Sequence derived from alignment at H-fluviatilis_contig1008:8870..22806+ (Heribaudiella fluviatilis SAG_13_90) ATGGGACAGGAACAAAGAGTGAACATGACGCGTCCAAGACATGCTGTTCA TCGACGAGCCTGCGCAGTGATTGTGGCGTTTGCGCTCATTGGCGCCGTTC AGAACCAGATGGGACAGGAACAAAGAGTGAACATGACGCGTCCAAGACAT GCTGTTCATCGACGAGCCTGCGCAGTGATTGTGGCGTTTGCGCTCATTGG CGCCGTTCAGAACCAGGCAGCAGCGTTCGTGTCAGCCCCCTTGCGAGCAC CAACCGTACGGCATTTCAACGGATTCCGCAACGAAAACATCAACGGCGAG AGTCGACGAAGACAGGACGTGAAAAACAAACACGGCTTCACGCCAGCACA ACGGCCACGATATCATGAGCAACACTGCAATACGGCGGCCGCGGCAGATG CACCAGCTCCAGAAGCCTCTGGCCATGCGGATGCGGCAGCAGCGTTCGTG TCAGCCCCCTTGCGAGCACCAACCGTACGGCATTTCAACGGATTCCGCAA CGAAAACATCAACGGCGAGAGTCGACGAAGACAGGACGTGAAAAACAAAC ACGGCTTCACGCCAGCACAACGGCCACGATATCATGAGCAACACTGCAAT ACGGCGGCCGCGGCAGATGCACCAGCTCCAGAAGCCTCTGGCCATGCGGA TGCGGGGAAGGAAGCCGCGCAGGCGGCGTCAGCGGCGGTGCGATCGTATC GTAGGGTGTACGACGCTGCAATGGAAGCGCTGAAGGGGAATATGGAGCTG AAGCCCTACCCTATCCCCGAGGGACTAGAGGAGAAATCCACGGTTTTCGG CAGGGGAAGAAATCAGCAGGGGAAGGAAGCCGCGCAGGCGGCGTCAGCGG CGGTGCGATCGTATCGTAGGGTGTACGACGCTGCAATGGAAGCGCTGAAG GGGAATATGGAGCTGAAGCCCTACCCTATCCCCGAGGGACTAGAGGAGAA ATCCACGGTTTTCGGCAGGGGAAGAAATCAGCAGAGCGTCTCCACGAAAA TCATGGCGTTCAAGGCACCCAAGTTCCGCCAGATCCGAGCGGCTTTGGTG GAGACGGATGGACTGACACATATCTTGAACTTCGTTATGTTTCCGGACCC CACAGCGTCTCCACGAAAATCATGGCGTTCAAGGCACCCAAGTTCCGCCA GATCCGAGCGGCTTTGGTGGAGACGGATGGACTGACACATATCTTGAACT TCGTTATGTTTCCGGACCCCACGTACGATATGCCAATCTTCGGAGCTGAC CTGGTGAGCCTTCCCGGGTTGCATCTCATCTGCATCGACCTGCAACCGTC ACGTCCGTCACAAGCGCTGGGTCGTCGCACCAAAGCCTTACTGAAAGAAG CCCAAAGGTACGATATGCCAATCTTCGGAGCTGACCTGGTGAGCCTTCCC GGGTTGCATCTCATCTGCATCGACCTGCAACCGTCACGTCCGTCACAAGC GCTGGGTCGTCGCACCAAAGCCTTACTGAAAGAAGCCCAAAGGCAGAATT TGAAAGCTTTACCGTGGGGTGGCGACCTACCGGAGGAAGCACAGAAGTTC TTCTCCCCGTATTGCCTCTGGTCCAAGATAGAGGCGAATGAGGCAGAATT TGAAAGCTTTACCGTGGGGTGGCGACCTACCGGAGGAAGCACAGAAGTTC TTCTCCCCGTATTGCCTCTGGTCCAAGATAGAGGCGAATGAGGTGGTTGT GGACAAGGTAATGGCGGCGGTGATGGATTATCTGGAGGTGTACTTGAATC TTGTTGCGGATGCTCTACCGAGCGACCCAAACATGATCTCGGAAATCCGA AAAGGGCACGCAGAATATTCCAACTACCGGTGGTTGTGGACAAGGTAATG GCGGCGGTGATGGATTATCTGGAGGTGTACTTGAATCTTGTTGCGGATGC TCTACCGAGCGACCCAAACATGATCTCGGAAATCCGAAAAGGGCACGCAG AATATTCCAACTACCGGCGGGAGAATGACCCCGCCCGAGGCATGCTCACA CGCTTCTACGGATATGAGTGGACGGAGGCTGCCATCGATGAAATTTTGTT CGATTTCAAGGGATGAGCGGGAGAATGACCCCGCCCGAGGCATGCTCACA CGCTTCTACGGATATGAGTGGACGGAGGCTGCCATCGATGAAATTTTGTT CGATTTCAAGGGATGA back to top