mRNA_H-fluviatilis_contig100695.206.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig100695.206.1
Unique NamemRNA_H-fluviatilis_contig100695.206.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A7K0WNM7_9ACTN (Aminopeptidase n=4 Tax=root TaxID=1 RepID=A0A7K0WNM7_9ACTN)

HSP 1 Score: 217 bits (553), Expect = 3.300e-61
Identity = 139/301 (46.18%), Postives = 180/301 (59.80%), Query Frame = 1
Query:    1 LGQTRASYD-DAAES-----------ERWPIPMVLDVG-ASDG---ELRQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTE---RLREVRGVLFALAGADAADPGTRRRARELFQDSTVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            L Q R SY  D+ ES           E WP PMV+    A+DG   E R LL+ +  ++L    A VQAN GG GF+RV L   LR +L        +E FVL+DDTWAG+LA RV   E+  LL     +E DP+VWRR++    EL RL G   A   R L+  +   +L RVE+ +       GT + D+ E   R  E+RGVLF+L G    D   R  AR+L+Q  ++DA+L++AAI V+A SATA+EHA L  AWRD+ TPQDELR+L+AL+DT+DP LFA  L+LA TEVRTQN
Sbjct:  499 LSQERFSYQADSLESSSSXXXXXXXAEPWPTPMVISTKTAADGATTEHRLLLEHAVELDLGGPAAVVQANPGGNGFFRVNLSESLRTSLATDPTATSIEFFVLLDDTWAGFLANRVSAEELEGLLRVLCISESDPAVWRRISSVLSELHRLGGEGRATHNRELIQELCDQSLKRVESFL-------GTPQQDKDEDHGRAEELRGVLFSLLGGLGEDEELRLSARQLWQLDSIDASLRSAAIEVLAMSATAQEHAQLTQAWRDSTTPQDELRFLSALIDTNDPELFAQVLDLARTEVRTQN 792          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A0J0UVA7_9ACTN (Aminopeptidase n=1 Tax=Actinobacteria bacterium IMCC26207 TaxID=1641811 RepID=A0A0J0UVA7_9ACTN)

HSP 1 Score: 204 bits (518), Expect = 2.120e-56
Identity = 128/293 (43.69%), Postives = 171/293 (58.36%), Query Frame = 1
Query:    1 LGQTRASY-------DDAAESERWPIPMVLDVGA-SDG---ELRQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDSTVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            L Q R SY       D ++E E WP PM++     +DG   + R LL+ +  I+L      VQAN GG GF+RV L   LR AL        ++ FVL+DDTWAG+LA RV + E+  LL      E DP+VWRR++G    L RL G   A+  R L+  +    L  +E  +  +   +   R    ER  E+RGVLFAL G    D   R  AR L+Q  T+D +L+ AAI V+AASAT +EHA LE AWR+++TPQ+EL +L+AL++TD+P  FA+ LELA TEVR QN
Sbjct:  476 LRQERFSYQAEPLDTDSSSEVEPWPTPMLISTKTVADGPSTDHRILLEQALEIDLGGPAVEVQANPGGNGFFRVNLTGSLRTALATDPTAASIDFFVLLDDTWAGFLANRVSVEELEDLLRVLCERESDPAVWRRISGVLSGLQRLGGAGRASRNRLLIQELCSQRLAGLEEVMQASQVGSDAMR----ERSEELRGVLFALLGGVGQDAEVRVSARNLWQLKTIDPSLREAAIEVLAASATVDEHAKLEQAWRESSTPQEELCFLSALIETDNPEQFAYVLELAMTEVRIQN 764          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A6J6Z0W8_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6Z0W8_9ZZZZ)

HSP 1 Score: 191 bits (485), Expect = 2.810e-55
Identity = 116/252 (46.03%), Postives = 151/252 (59.92%), Query Frame = 1
Query:   91 ELRQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDSTVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            E R LL+ +  I+L      VQAN GG GF+RV L   LR AL        +E FVL+DDTWAG+LA RV + E+  LL      E DP+VWRR++G    L RL G   A+  R L+  +    L  +E  +      +   R    ER  E+RGVLFAL G    D      AR L+Q  T+D +L+ AAI V+AASAT +EHA LE AWR+++TPQ+EL +L+AL++TD+P  FA+ LELA TEVRTQN
Sbjct:   15 EHRILLEQALEIDLGGPAVEVQANPGGNGFFRVNLTGSLRTALATDPTASSIEFFVLLDDTWAGFLANRVSVEELEDLLRVLCEKEADPAVWRRMSGVLSGLQRLGGAGRASHNRLLIQELCSQRLAELEEVMQAPQVGSDAMR----ERSEELRGVLFALLGGVGQDVEIGVSARNLWQLKTIDPSLREAAIEVLAASATVDEHAKLEQAWRESSTPQEELCFLSALIETDNPERFAYVLELALTEVRTQN 262          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A3S0EBV6_9ACTN (ERAP1_C domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A3S0EBV6_9ACTN)

HSP 1 Score: 180 bits (457), Expect = 6.220e-51
Identity = 122/283 (43.11%), Postives = 153/283 (54.06%), Query Frame = 1
Query:   28 DAAESERWPIPMVLD--VGASDGELRQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDST--------VDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            D +  ERWP+P+V+   V  S    R LL+  T ++L   P  ++ N GG GF+R EL A LR A     D  PLERFVL+DDTWA  L G +   EV QLL   +  E DPSVWRR+A A REL RL G D A  A  L   VA  AL R  A    T   +G +   R ER R++RG+L  + G    D   R  AR++             VD  L AAA+ VVAA+    +H ++E  WR AA PQD +R+L AL DT  P  F  TL+LA  EVR Q+
Sbjct:    2 DPSLGERWPVPLVVTATVDGSTRHERVLLEGPTVVDLGGAPIELRLNTGGDGFFRSELPASLRTADAVDPDSTPLERFVLVDDTWAALLRGTLTTAEVEQLLRLVAWRETDPSVWRRIAQAVRELRRLEGWDGAVRAPRLAQDVA--ALPRSRA----TEVISGVDESGR-ERWRDLRGILTVVLGVAGNDGDIRDLARDIVHTDPERLRERRDVDPALGAAALDVVAATGDRADHDLIEQRWRTAANPQDTIRHLYALADTPVPECFEKTLDLALGEVRAQD 277          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: R4YYW2_9ACTN (Aminopeptidase n=3 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4YYW2_9ACTN)

HSP 1 Score: 180 bits (457), Expect = 6.250e-48
Identity = 121/279 (43.37%), Postives = 157/279 (56.27%), Query Frame = 1
Query:   28 DAAESERWPIPMVLDVGASDGEL--RQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEH-GDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPAL-DRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELF--QDSTVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            D AE+  WPIP  L VG  DG L   QL++A +T+ +     +V  N  G GF+R   D EL   LL H G+  P+ER++++DDTWA  LAGRV+++ VV++   A   +  P+VWRRL G    L RL   DH    +A V SV+  AL D    A D  AA             +++  VLF +AG   ADP T++ AREL     + VDA L A+A GVVAA A+A EH  L   WR A  PQ+E+R+L ALVDT     F  TL+L   EVRTQN
Sbjct:  486 DEAEARTWPIPARLSVGTPDGRLVLDQLVEADSTMTVPSDARWVMGNASGNGFWRTHHDGELMDNLLAHLGELEPIERYLVVDDTWADLLAGRVEVSRVVEVCE-AMTDDRHPAVWRRLGGVFGGLRRLIANDHLDQFQAWVRSVSFVALEDAARLAHDGDAAA------------QDLYAVLFGIAGVTGADPATQQAARELLAADPAKVDANLLASATGVVAADASAAEHRDLMVRWRAADNPQEEVRFLYALVDTPSREDFEATLDLVTNEVRTQN 751          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: UPI001D11F2D5 (M1 family metallopeptidase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D11F2D5)

HSP 1 Score: 177 bits (448), Expect = 1.090e-46
Identity = 120/290 (41.38%), Postives = 155/290 (53.45%), Query Frame = 1
Query:   16 ASYDDAAES--ERWPIPMVLD--VGASDGELRQLLDASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVA-SVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDST--------VDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            A  DD  +   ERWP+PMVL   V  ++ + R LL+  TT++L  RP  ++ N  G GF+R EL A  R A        PLERFVL+DD WA  L G +    V  L+  ++  E DPSVWRR+A A REL RL G DH     A +A  VA   L  V+  +D+   T         ER R++RG+L +L G    D   R  A EL              D+TL AAA+ VVAA+  A++HA++E  W  A  PQD +RYL AL DT     F H LEL  TEVR+Q+
Sbjct:  485 AGDDDGGDQLGERWPVPMVLTALVDGTERQERVLLEEPTTVDLGGRPTALRINTRGDGFFRSELPATARAAEAVDPTTTPLERFVLLDDAWAALLRGDLSGAAVEDLVRLSAWRETDPSVWRRIAQAVRELRRLRGLDHDDDINAALAVDVADGPLGHVDRLLDDLDPTG-------LERWRDLRGILVSLLGVVGRDAAIRTLAHELVHTPPDEARARPDTDSTLLAAALDVVAATGDADDHALIEERWHAATNPQDVIRYLYALADTPVAECFDHLLELTLTEVRSQD 767          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: UPI001F1FFDD6 (M1 family metallopeptidase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F1FFDD6)

HSP 1 Score: 145 bits (365), Expect = 1.820e-35
Identity = 107/283 (37.81%), Postives = 146/283 (51.59%), Query Frame = 1
Query:   28 DAAESERWPIPMVLDVGASDGEL--RQLLDA-STTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDPG--PLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDS----TVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATE-VRTQN 846
            +A    RW IP++L +  ++     R LL+  S  + +     FV  N  G GFYRV    +L  AL         P+ER+ L+DD WA  LA ++   + + L VG+ A E D SVW+R+ GA   L RL   +     R  V ++  PALDR+  A             D T+R R++RGVLF   G    D     RAR L  +S     VDA+L AA+I V+AA+ +A E     A +  A TPQ+ELRYL+AL D DDP L    L ++ T+ VRTQN
Sbjct:  533 EALRGTRWAIPVILTISINEVLTVERVLLEGDSVDVPVVEEIDFVLVNTEGTGFYRVRYAPDLLAALATRAATALSPIERYGLVDDAWAAVLADQMTAAQFLDL-VGSFAAETDLSVWQRIIGALGALDRLIDGEPREVLRERVRALLHPALDRLGPA----------PAADETDRDRQLRGVLFEALGTIGNDHNVGDRARALLAESHRGTDVDASLVAASINVIAATGSAAEFEDFVARFAAAPTPQEELRYLSALADFDDPELMQRVLAMSITDQVRTQN 804          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A2E6ZF42_9ACTN (Aminopeptidase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6ZF42_9ACTN)

HSP 1 Score: 144 bits (363), Expect = 3.200e-35
Identity = 106/292 (36.30%), Postives = 154/292 (52.74%), Query Frame = 1
Query:    1 LGQTRASYDDAAESERWPIPMVL--DVGASDGELRQLLDASTT-IELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDP--GPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERL-REVRGVLFALAGADAADPGTRRRARELFQDS----TVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            + Q+R  Y D  E   W +P+++   VG++D E R LL+ + T I+L   P +V  N GG GFYRV  + +L  AL +       P ER+ L+DDTW+  LAG +     + L+    A E D +VW+R+  +   L  ++     +  + L+  ++  AL  +           G E  D    L RE+R +LFA AG   AD   R  A  +F DS    + +  L AAAI VVAA+   + H+ L A +R+A TPQ E+RYL AL++ +   LF  TLEL  +EVRTQN
Sbjct:  470 IRQSRFGYSDV-EPALWHVPVIVRAQVGSTDVEKRVLLEGNQTEIDLGGAPEWVVVNAGGHGFYRVTYETDLLDALSKRALDVLAPPERYGLVDDTWSSVLAGSIDAETHLSLITSLVA-ETDLAVWQRMLSSLEHLYSIADERGRSRLQILIRDLSSTALGVL-----------GLEPLDNEPDLDRELRALLFASAGTTGADKSVRELAEGIFADSNAGKSTEPNLTAAAIRVVAAAGGQQTHSELVALYREAPTPQLEVRYLMALLELEQVDLFKETLELFTSEVRTQN 748          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A7C7TFN6_9ACTN (Aminopeptidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7TFN6_9ACTN)

HSP 1 Score: 142 bits (359), Expect = 1.090e-34
Identity = 104/290 (35.86%), Postives = 147/290 (50.69%), Query Frame = 1
Query:    7 QTRASYDDAAESERWPIPMVL--DVGASDGELRQLL-DASTTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHGDP--GPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERL-REVRGVLFALAGADAADPGTRRRARELFQDST----VDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATEVRTQN 846
            Q+R  Y +  ++  W +P+++   VG+   E R LL D+  TI+L   P +V  N GG GFYRV     LR AL           ER+ L+DDTW+  LAG +Q  + + L+    A+E D +VW+R+  +   L  ++ P        LV  ++   L  +           G E  D    L RE+R  LFA AG    D   R  A  LF D++    V+  L AA + VVAA+     HA L   +R+A TPQ E+RYL AL++ +D  LF  TLEL  +EVR+QN
Sbjct:  469 QSRFGYGEVGDAT-WHVPIIVRAQVGSKTVESRLLLEDSEATIDLGGTPTWVIVNAGGHGFYRVSYSKVLRDALSGRALDVLSEAERYGLVDDTWSAVLAGELQAEDHIALITSL-ASETDLAVWQRMLSSLEHLYAIADPSGQQRLEVLVRDLSTTGLGVL-----------GLEPMDNEPALDRELRAALFAAAGTTGQDASVREMANALFADASAGNAVEPNLAAAVVRVVAAAGDDATHATLVDLYREAPTPQLEVRYLMALLEIEDIQLFEQTLELITSEVRSQN 745          
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Match: A0A6I3F762_9ACTN (Aminopeptidase n=2 Tax=root TaxID=1 RepID=A0A6I3F762_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 1.570e-34
Identity = 106/291 (36.43%), Postives = 149/291 (51.20%), Query Frame = 1
Query:    4 GQTRASYDDAAESERWPIPMVLDVGA-SDGEL---RQLLDA-STTIELAHRPAFVQANVGGAGFYRVELDAELRLALLEHG--DPGPLERFVLIDDTWAGYLAGRVQLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVASVAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPGTRRRARELFQDSTV--DATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQDELRYLNALVDTDDPGLFAHTLELAATE-VRTQN 846
            G+   + DD  ++  W +P++    + +DG +   R LLD  S  I+L     ++  N  G GFYR     +LR AL+ H   D  P+ER+ LIDD WAG LAG ++  + ++    A A E D SVW+R+ G    L R+   D   A R  + S+  PA+ R+    D+ + T        ++R R +RGVLF   G    DP    RAR L     +  D  L AAA+ +VAAS T  E     A    A TPQ+E R+L AL D  DP LF   LE++ T+ +RTQN
Sbjct:  541 GEHTLAADD--DTSMWAVPLIFSQRSRTDGVITFERVLLDQQSMDIDLIEPVEWILVNTEGTGFYRARYSPDLRAALVAHAQNDLSPIERYGLIDDIWAGVLAGDLEAMDFIEA-AEAFAHETDLSVWQRIIGGLGALDRIVDGDARDALRKRIRSLLAPAVARLG---DDPSPT-------ESDRDRALRGVLFEARGTLGNDPDAHARARVLLDSGLIEPDPALTAAAVNIVAASGTPAEFDEFVARMTSAPTPQEEQRFLGALADFTDPELFRRILEMSITDDIRTQN 818          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100695.206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K0WNM7_9ACTN3.300e-6146.18Aminopeptidase n=4 Tax=root TaxID=1 RepID=A0A7K0WN... [more]
A0A0J0UVA7_9ACTN2.120e-5643.69Aminopeptidase n=1 Tax=Actinobacteria bacterium IM... [more]
A0A6J6Z0W8_9ZZZZ2.810e-5546.03Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A... [more]
A0A3S0EBV6_9ACTN6.220e-5143.11ERAP1_C domain-containing protein (Fragment) n=1 T... [more]
R4YYW2_9ACTN6.250e-4843.37Aminopeptidase n=3 Tax=Candidatus Microthrix parvi... [more]
UPI001D11F2D51.090e-4641.38M1 family metallopeptidase n=1 Tax=Aquihabitans sp... [more]
UPI001F1FFDD61.820e-3537.81M1 family metallopeptidase n=1 Tax=Rhabdotherminco... [more]
A0A2E6ZF42_9ACTN3.200e-3536.30Aminopeptidase n=1 Tax=Acidimicrobiaceae bacterium... [more]
A0A7C7TFN6_9ACTN1.090e-3435.86Aminopeptidase n=1 Tax=Acidimicrobiia bacterium Ta... [more]
A0A6I3F762_9ACTN1.570e-3436.43Aminopeptidase n=2 Tax=root TaxID=1 RepID=A0A6I3F7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig100695contigH-fluviatilis_contig100695:3..848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score179.1
Seed ortholog evalue2.9e-42
Seed eggNOG ortholog1229780.BN381_250091
Preferred namepepN
KEGG rclassRC00096,RC00141
KEGG koko:K01256,ko:K08776
KEGG ReactionR00899,R04951
KEGG Pathwayko00480,ko01100,map00480,map01100
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.ERAP1-like C-terminal domain
EggNOG OGs2GJJ4@201174,3UWD9@52018,COG0308@1,COG0308@2
EC3.4.11.2
COG Functional cat.E
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons1
Model size846
Cds size846
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929019.3951433-CDS-H-fluviatilis_contig100695:2..8481622929019.3951433-CDS-H-fluviatilis_contig100695:2..848Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100695 3..848 -
1691135152.045968-CDS-H-fluviatilis_contig100695:2..8481691135152.045968-CDS-H-fluviatilis_contig100695:2..848Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100695 3..848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig100695.206.1prot_H-fluviatilis_contig100695.206.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig100695 3..848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig100695.206.1

>prot_H-fluviatilis_contig100695.206.1 ID=prot_H-fluviatilis_contig100695.206.1|Name=mRNA_H-fluviatilis_contig100695.206.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=282bp
LGQTRASYDDAAESERWPIPMVLDVGASDGELRQLLDASTTIELAHRPAF
VQANVGGAGFYRVELDAELRLALLEHGDPGPLERFVLIDDTWAGYLAGRV
QLTEVVQLLVGASATELDPSVWRRLAGACRELVRLSGPDHAAAARALVAS
VAVPALDRVEAAIDETAATAGTERGDRTERLREVRGVLFALAGADAADPG
TRRRARELFQDSTVDATLQAAAIGVVAASATAEEHAVLEAAWRDAATPQD
ELRYLNALVDTDDPGLFAHTLELAATEVRTQN
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mRNA from alignment at H-fluviatilis_contig100695:3..848-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig100695.206.1 ID=mRNA_H-fluviatilis_contig100695.206.1|Name=mRNA_H-fluviatilis_contig100695.206.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=846bp|location=Sequence derived from alignment at H-fluviatilis_contig100695:3..848- (Heribaudiella fluviatilis SAG_13_90)
CTCGGGCAGACACGGGCGTCCTACGACGATGCCGCCGAGAGCGAGCGTTG GCCGATCCCCATGGTGCTCGACGTCGGTGCCTCCGACGGCGAGCTGCGTC AGCTCCTCGACGCGTCGACCACGATCGAGCTGGCGCACCGACCGGCGTTC GTGCAGGCCAACGTCGGCGGCGCCGGCTTCTACCGGGTGGAGCTCGACGC CGAGCTCCGACTCGCCCTGTTGGAGCACGGTGACCCGGGTCCGCTCGAGC GCTTCGTGCTGATCGACGACACGTGGGCGGGCTACCTGGCGGGGCGGGTG CAGCTGACCGAGGTCGTCCAGCTGCTCGTCGGTGCCTCGGCGACCGAGCT CGACCCGTCGGTGTGGCGGCGCCTCGCCGGGGCGTGCCGTGAGCTCGTCC GCCTGAGCGGACCCGACCACGCCGCTGCGGCCCGGGCGCTCGTCGCGTCG GTGGCGGTGCCGGCGCTCGACCGGGTCGAGGCGGCGATCGACGAGACGGC AGCGACTGCAGGGACCGAGCGGGGCGACCGGACCGAGCGACTGCGAGAGG TGCGTGGCGTGCTGTTCGCCCTCGCCGGCGCTGACGCCGCGGACCCGGGC ACCCGCCGGCGCGCCCGCGAGCTGTTCCAGGACTCGACGGTCGACGCCAC CCTCCAGGCCGCGGCCATCGGCGTCGTGGCCGCCTCCGCGACCGCCGAGG AGCACGCGGTGCTCGAAGCGGCATGGCGCGACGCCGCCACCCCCCAGGAC GAGCTGCGCTACCTCAACGCCCTGGTCGACACCGACGACCCCGGGCTGTT CGCCCACACGCTGGAGCTGGCCGCGACCGAGGTGCGCACGCAGAAC
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Coding sequence (CDS) from alignment at H-fluviatilis_contig100695:3..848-

>mRNA_H-fluviatilis_contig100695.206.1 ID=mRNA_H-fluviatilis_contig100695.206.1|Name=mRNA_H-fluviatilis_contig100695.206.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1692bp|location=Sequence derived from alignment at H-fluviatilis_contig100695:3..848- (Heribaudiella fluviatilis SAG_13_90)
CTCGGGCAGACACGGGCGTCCTACGACGATGCCGCCGAGAGCGAGCGTTG
GCCGATCCCCATGGTGCTCGACGTCGGTGCCTCCGACGGCGAGCTGCGTC
AGCTCCTCGACGCGTCGACCACGATCGAGCTGGCGCACCGACCGGCGTTC
GTGCAGGCCAACGTCGGCGGCGCCGGCTTCTACCGGGTGGAGCTCGACGC
CGAGCTCCGACTCGCCCTGTTGGAGCACGGTGACCCGGGTCCGCTCGAGC
GCTTCGTGCTGATCGACGACACGTGGGCGGGCTACCTGGCGGGGCGGGTG
CAGCTGACCGAGGTCGTCCAGCTGCTCGTCGGTGCCTCGGCGACCGAGCT
CGACCCGTCGGTGTGGCGGCGCCTCGCCGGGGCGTGCCGTGAGCTCGTCC
GCCTGAGCGGACCCGACCACGCCGCTGCGGCCCGGGCGCTCGTCGCGTCG
GTGGCGGTGCCGGCGCTCGACCGGGTCGAGGCGGCGATCGACGAGACGGC
AGCGACTGCAGGGACCGAGCGGGGCGACCGGACCGAGCGACTGCGAGAGG
TGCGTGGCGTGCTGTTCGCCCTCGCCGGCGCTGACGCCGCGGACCCGGGC
ACCCGCCGGCGCGCCCGCGAGCTGTTCCAGGACTCGACGGTCGACGCCAC
CCTCCAGGCCGCGGCCATCGGCGTCGTGGCCGCCTCCGCGACCGCCGAGG
AGCACGCGGTGCTCGAAGCGGCATGGCGCGACGCCGCCACCCCCCAGGAC
GAGCTGCGCTACCTCAACGCCCTGGTCGACACCGACGACCCCGGGCTGTT
CGCCCACACGCTGGAGCTGGCCGCGACCGAGGTGCGCACGCAGAACCTCG
GGCAGACACGGGCGTCCTACGACGATGCCGCCGAGAGCGAGCGTTGGCCG
ATCCCCATGGTGCTCGACGTCGGTGCCTCCGACGGCGAGCTGCGTCAGCT
CCTCGACGCGTCGACCACGATCGAGCTGGCGCACCGACCGGCGTTCGTGC
AGGCCAACGTCGGCGGCGCCGGCTTCTACCGGGTGGAGCTCGACGCCGAG
CTCCGACTCGCCCTGTTGGAGCACGGTGACCCGGGTCCGCTCGAGCGCTT
CGTGCTGATCGACGACACGTGGGCGGGCTACCTGGCGGGGCGGGTGCAGC
TGACCGAGGTCGTCCAGCTGCTCGTCGGTGCCTCGGCGACCGAGCTCGAC
CCGTCGGTGTGGCGGCGCCTCGCCGGGGCGTGCCGTGAGCTCGTCCGCCT
GAGCGGACCCGACCACGCCGCTGCGGCCCGGGCGCTCGTCGCGTCGGTGG
CGGTGCCGGCGCTCGACCGGGTCGAGGCGGCGATCGACGAGACGGCAGCG
ACTGCAGGGACCGAGCGGGGCGACCGGACCGAGCGACTGCGAGAGGTGCG
TGGCGTGCTGTTCGCCCTCGCCGGCGCTGACGCCGCGGACCCGGGCACCC
GCCGGCGCGCCCGCGAGCTGTTCCAGGACTCGACGGTCGACGCCACCCTC
CAGGCCGCGGCCATCGGCGTCGTGGCCGCCTCCGCGACCGCCGAGGAGCA
CGCGGTGCTCGAAGCGGCATGGCGCGACGCCGCCACCCCCCAGGACGAGC
TGCGCTACCTCAACGCCCTGGTCGACACCGACGACCCCGGGCTGTTCGCC
CACACGCTGGAGCTGGCCGCGACCGAGGTGCGCACGCAGAAC
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