mRNA_H-fluviatilis_contig100551.172.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig100551.172.1
Unique NamemRNA_H-fluviatilis_contig100551.172.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A6A6PZL3_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PZL3_9PEZI)

HSP 1 Score: 97.1 bits (240), Expect = 1.290e-20
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLLT 435
            LN  +S+ L+  L     I RLYSHQAEAI + LH+ Q+ I+ATSTSSGKSL Y IPVL  LE +P  RA+++FPTKALAQDQ R+L+ LLT
Sbjct:  350 LNFSLSQNLVNALFNTRGIERLYSHQAEAI-NALHEGQNVIVATSTSSGKSLIYQIPVLTELESDPQTRAMYIFPTKALAQDQRRSLKELLT 440
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A7S0JB92_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JB92_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 2.720e-20
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  148 SQLPPLNTLISETLIQTLEALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALR 423
            + L P  + +SET++  L A  +HRLYSHQA A+  +L    H +L+T T+SGKSLAYN+PVL  + ++ +ARAL++FPTKALA DQLR LR
Sbjct:  141 ASLEPPPSQLSETVLNVLAAAGLHRLYSHQAAAVHRLL-DGGHVMLSTPTASGKSLAYNVPVLDAMARSSSARALYVFPTKALAHDQLRELR 231
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: UPI001B399DF9 (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B399DF9)

HSP 1 Score: 95.9 bits (237), Expect = 3.270e-20
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLLT 435
            L+ L+S+ L+  L  A NI + ++HQAEAI S LH   H +++TSTSSGKSL Y +PVL  LEQ+PN RA+++FPTKALAQDQ R+L+ +LT
Sbjct:  389 LDFLLSQGLVNALYNAKNITQFFAHQAEAINS-LHAGHHVVVSTSTSSGKSLIYQLPVLHALEQDPNTRAMYIFPTKALAQDQRRSLKEMLT 479
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: G0RAF6_HYPJQ (Predicted protein n=3 Tax=Trichoderma TaxID=5543 RepID=G0RAF6_HYPJQ)

HSP 1 Score: 95.1 bits (235), Expect = 6.200e-20
Identity = 52/92 (56.52%), Postives = 72/92 (78.26%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLLT 435
            LN L+S+ L+  L  A  I + Y+HQAEA+ + LH+ Q+ +++TSTSSGKSL Y +PVL  LEQ+PN+RAL++FPTKALAQDQ R+LR +L+
Sbjct:  852 LNFLLSQDLVNALYNAKQITQFYTHQAEAL-NRLHEGQNIVISTSTSSGKSLIYQLPVLHALEQDPNSRALYIFPTKALAQDQKRSLRDILS 942
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A0C3I0K6_9PEZI (Uncharacterized protein n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3I0K6_9PEZI)

HSP 1 Score: 94.7 bits (234), Expect = 8.260e-20
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLL 432
            LN  +S+ L+  L    NI + YSHQAEAI + LH   H ++ATSTSSGKSL Y IPVL  LE++PNARA+++FPTKALAQDQ R+L+ ++
Sbjct:  348 LNFRLSQDLVNALYNTKNITQFYSHQAEAINN-LHDGHHVVVATSTSSGKSLIYQIPVLYELERDPNARAMYIFPTKALAQDQRRSLKEMM 437
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: S3DG85_GLAL2 (p-loop containing nucleoside triphosphate hydrolase n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3DG85_GLAL2)

HSP 1 Score: 94.4 bits (233), Expect = 1.130e-19
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLL 432
            LN  +S+ L+  L    NI + Y+HQAEAI + LH+  H I+ATSTSSGKSL Y IPVL  LE++PN RA+++FPTKALAQDQ R+L+ ++
Sbjct:  358 LNFRLSQNLVNALYNTKNITQFYAHQAEAINN-LHEGHHVIVATSTSSGKSLIYQIPVLHELERDPNTRAMYIFPTKALAQDQRRSLKEMM 447
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A7V3P2U1_9BACT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3P2U1_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-19
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1 
Query:  187 LIQTLEALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQL 411
            L   LE   I RLY+HQAEAI S + + +H I+ TST+SGK+L YNIPVL  LE++P ARAL+++PTKALAQDQL
Sbjct:   44 LRDVLERQGIRRLYTHQAEAI-SCVRRGEHVIVVTSTASGKTLCYNIPVLESLERDPRARALYIYPTKALAQDQL 117
[Close]
BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A8H4VVH4_9HELO (Helicase ATP-binding domain-containing protein n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4VVH4_9HELO)

HSP 1 Score: 94.0 bits (232), Expect = 1.420e-19
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 1 
Query:  163 LNTLISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLL 432
            LN  +S+ L+  L    NI + Y+HQAEAI + LH   H I+ATSTSSGKSL Y IPVL  LEQ+PN RA+++FPTKALAQDQ R+++ ++
Sbjct:  362 LNFQLSQNLVNALYNTKNITQFYAHQAEAINN-LHDGHHVIVATSTSSGKSLIYQIPVLHALEQDPNTRAMYIFPTKALAQDQRRSMKEMM 451
[Close]
BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: X1I732_9ZZZZ (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1I732_9ZZZZ)

HSP 1 Score: 89.0 bits (219), Expect = 1.500e-19
Identity = 48/95 (50.53%), Postives = 69/95 (72.63%), Query Frame = 1 
Query:  148 SQLPPLNTLISETLIQTLEALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLL 432
            ++L P    I+  L+  L+   I  LYSHQA+AI  I + + +TI+ T T+SGK+L YNIPVL  + ++P+ARAL+LFPTKAL+QDQ++AL RL+
Sbjct:   35 AELSPFPENINSKLVNVLKESGIKSLYSHQAQAIKEISNGK-NTIVVTPTASGKTLCYNIPVLNSIIKDPDARALYLFPTKALSQDQIKALERLI 128
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BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Match: A0A6A6V277_9PLEO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V277_9PLEO)

HSP 1 Score: 93.6 bits (231), Expect = 2.090e-19
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 1 
Query:  175 ISETLIQTL-EALNIHRLYSHQAEAIASILHKRQHTILATSTSSGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLL 432
            +S+ L+  L    NI +LYSHQAEAI + LH  Q+ I++TSTSSGKSL Y +PVL +LE+ PNARA+++FPTKALAQDQ R+L+ +L
Sbjct:  290 LSQNLVNALYNTKNITQLYSHQAEAI-NHLHDGQNVIVSTSTSSGKSLIYQLPVLHQLEREPNARAMYIFPTKALAQDQRRSLKEML 375
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100551.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6PZL3_9PEZI1.290e-2059.78Uncharacterized protein n=1 Tax=Neohortaea acidoph... [more]
A0A7S0JB92_9EUKA2.720e-2053.26Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
UPI001B399DF93.270e-2056.52P-loop containing nucleoside triphosphate hydrolas... [more]
G0RAF6_HYPJQ6.200e-2056.52Predicted protein n=3 Tax=Trichoderma TaxID=5543 R... [more]
A0A0C3I0K6_9PEZI8.260e-2057.14Uncharacterized protein n=1 Tax=Oidiodendron maius... [more]
S3DG85_GLAL21.130e-1956.04p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7V3P2U1_9BACT1.270e-1961.33DEAD/DEAH box helicase (Fragment) n=1 Tax=Armatimo... [more]
A0A8H4VVH4_9HELO1.420e-1956.04Helicase ATP-binding domain-containing protein n=1... [more]
X1I732_9ZZZZ1.500e-1950.53Helicase ATP-binding domain-containing protein (Fr... [more]
A0A6A6V277_9PLEO2.090e-1958.62P-loop containing nucleoside triphosphate hydrolas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig100551contigH-fluviatilis_contig100551:260..830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score95.1
Seed ortholog evalue2.8e-17
Seed eggNOG ortholog51453.EGR51853
Preferred nameHRQ1
KEGG koko:K06877
GOsGO:0000166,GO:0000217,GO:0000405,GO:0000733,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034644,GO:0035639,GO:0035861,GO:0036094,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0070035,GO:0070914,GO:0071103,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0090304,GO:0090734,GO:0097159,GO:0097367,GO:0104004,GO:0140097,GO:0140098,GO:1901255,GO:1901265,GO:1901360,GO:1901363
EggNOG free text desc.DNA replication factor CDT1 like
EggNOG OGs212WI@147550,38FJG@33154,3NUXJ@4751,3QKQR@4890,3TF0B@5125,3TYTK@5129,COG1205@1,KOG4150@2759
COG Functional cat.A
Best tax levelHypocreaceae
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons4
Model size435
Cds size435
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig100551.172.1prot_H-fluviatilis_contig100551.172.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig100551 260..830 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929014.6869612-CDS-H-fluviatilis_contig100551:259..3041622929014.6869612-CDS-H-fluviatilis_contig100551:259..304Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 260..304 -
1691135150.0037165-CDS-H-fluviatilis_contig100551:259..3041691135150.0037165-CDS-H-fluviatilis_contig100551:259..304Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 260..304 -
1622929014.70442-CDS-H-fluviatilis_contig100551:354..4031622929014.70442-CDS-H-fluviatilis_contig100551:354..403Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 355..403 -
1691135150.017411-CDS-H-fluviatilis_contig100551:354..4031691135150.017411-CDS-H-fluviatilis_contig100551:354..403Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 355..403 -
1622929014.7182636-CDS-H-fluviatilis_contig100551:458..5621622929014.7182636-CDS-H-fluviatilis_contig100551:458..562Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 459..562 -
1691135150.0274282-CDS-H-fluviatilis_contig100551:458..5621691135150.0274282-CDS-H-fluviatilis_contig100551:458..562Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 459..562 -
1622929014.733491-CDS-H-fluviatilis_contig100551:593..8301622929014.733491-CDS-H-fluviatilis_contig100551:593..830Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 594..830 -
1691135150.0426068-CDS-H-fluviatilis_contig100551:593..8301691135150.0426068-CDS-H-fluviatilis_contig100551:593..830Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100551 594..830 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig100551.172.1

>prot_H-fluviatilis_contig100551.172.1 ID=prot_H-fluviatilis_contig100551.172.1|Name=mRNA_H-fluviatilis_contig100551.172.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=145bp
GTADPLLEPEGDATDPNSVEPALSFSSNPPLFHCSTSTSTGYGHADRDTS
QLPPLNTLISETLIQTLEALNIHRLYSHQAEAIASILHKRQHTILATSTS
SGKSLAYNIPVLRRLEQNPNARALFLFPTKALAQDQLRALRRLLT
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mRNA from alignment at H-fluviatilis_contig100551:260..830-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig100551.172.1 ID=mRNA_H-fluviatilis_contig100551.172.1|Name=mRNA_H-fluviatilis_contig100551.172.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=571bp|location=Sequence derived from alignment at H-fluviatilis_contig100551:260..830- (Heribaudiella fluviatilis SAG_13_90)
GGGACCGCGGATCCTTTATTAGAACCTGAGGGCGATGCCACTGACCCAAA
TAGTGTGGAGCCCGCCTTGTCTTTCTCTTCGAACCCCCCATTGTTTCACT
GTTCGACTTCAACCTCAACCGGATACGGACATGCCGATCGGGACACCTCA
CAGTTGCCGCCTCTCAACACTCTGATCAGTGAAACTCTCATTCAGACATT
AGAAGCTCTCAATATCCATCGTCTCTACTCTCACCAGGTGTCGATGTGTG
TCACCTCACGTTGACCAGGCGGAAGCAATCGCGTCGATTCTGCACAAACG
TCAACACACCATCCTGGCCACATCGACGTCGTCCGGCAAGTCGTTGGCCT
ACAACATACCAGTGCTGAGACGGTTAGGAAGTGAGGTTGGGGGTTGAAGA
CTTTTGGCGCATGTTGCTACCGTTTAGATTGGAACAGAATCCGAACGCGA
GGGCGTTGTTTCTGTTTCCCACCAAGGTCCGGTGTGCCTTTTGTGCTGTC
ATTCCGAATGGCGGTGTTATTGGCAGGCGTTGGCGCAGGACCAGCTGCGT
GCTCTCCGGCGCCTGTTGACA
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Coding sequence (CDS) from alignment at H-fluviatilis_contig100551:260..830-

>mRNA_H-fluviatilis_contig100551.172.1 ID=mRNA_H-fluviatilis_contig100551.172.1|Name=mRNA_H-fluviatilis_contig100551.172.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=870bp|location=Sequence derived from alignment at H-fluviatilis_contig100551:260..830- (Heribaudiella fluviatilis SAG_13_90)
GGGACCGCGGATCCTTTATTAGAACCTGAGGGCGATGCCACTGACCCAAA
TAGTGTGGAGCCCGCCTTGTCTTTCTCTTCGAACCCCCCATTGTTTCACT
GTTCGACTTCAACCTCAACCGGATACGGACATGCCGATCGGGACACCTCA
CAGTTGCCGCCTCTCAACACTCTGATCAGTGAAACTCTCATTCAGACATT
AGAAGCTCTCAATATCCATCGTCTCTACTCTCACCAGGGGACCGCGGATC
CTTTATTAGAACCTGAGGGCGATGCCACTGACCCAAATAGTGTGGAGCCC
GCCTTGTCTTTCTCTTCGAACCCCCCATTGTTTCACTGTTCGACTTCAAC
CTCAACCGGATACGGACATGCCGATCGGGACACCTCACAGTTGCCGCCTC
TCAACACTCTGATCAGTGAAACTCTCATTCAGACATTAGAAGCTCTCAAT
ATCCATCGTCTCTACTCTCACCAGGCGGAAGCAATCGCGTCGATTCTGCA
CAAACGTCAACACACCATCCTGGCCACATCGACGTCGTCCGGCAAGTCGT
TGGCCTACAACATACCAGTGCTGAGACGGCGGAAGCAATCGCGTCGATTC
TGCACAAACGTCAACACACCATCCTGGCCACATCGACGTCGTCCGGCAAG
TCGTTGGCCTACAACATACCAGTGCTGAGACGATTGGAACAGAATCCGAA
CGCGAGGGCGTTGTTTCTGTTTCCCACCAAGATTGGAACAGAATCCGAAC
GCGAGGGCGTTGTTTCTGTTTCCCACCAAGGCGTTGGCGCAGGACCAGCT
GCGTGCTCTCCGGCGCCTGTTGACAGCGTTGGCGCAGGACCAGCTGCGTG
CTCTCCGGCGCCTGTTGACA
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