mRNA_H-fluviatilis_contig10042.148.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A842V0P7_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A842V0P7_9ARCH) HSP 1 Score: 84.0 bits (206), Expect = 2.460e-18 Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 3
Query: 162 ALCTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCGGRCHCELDTGKCT 338
A CT DSDCVPDACCHA C+ R+ DC +MCTM+C+P TLDCGG C CE G CT
Sbjct: 30 AECTSDSDCVPDACCHATGCVPREQAPDCTDIMCTMECKPGTLDCGGTCICEQ--GACT 86
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A256XY71_9ARCH (Uncharacterized protein n=2 Tax=Candidatus Woesearchaeota TaxID=1801616 RepID=A0A256XY71_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 7.760e-13 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCGGRCHCELDTGK 332
C D+DC P CCHA C+ + +CEG+MCTM+CR TLDCGGRC C T K
Sbjct: 103 CKTDADCAPAECCHATKCVLKSKAPNCEGIMCTMECRQGTLDCGGRCKCIEGTCK 157
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A7J3UH18_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A7J3UH18_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 1.480e-12 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCG-GRCHCELDTGKCTSSLK 350
C++DSDCVP +CCH +C+ +CEG+MCTM+C+P T+DCG G C C KC + LK
Sbjct: 16 CSKDSDCVPASCCHPDSCVPAGEAPNCEGMMCTMECKPDTMDCGQGDCKCI--NNKCKAILK 75
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A662FAE6_9ARCH (Uncharacterized protein n=3 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A662FAE6_9ARCH) HSP 1 Score: 67.8 bits (164), Expect = 4.330e-12 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 3
Query: 51 IREILFIGVMLMIVIWFLLTPKQPSDAAPHSLNPDSHALCTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCG-GRCHCE 317
IR++ ++L++ FLLT +P C DSDCVP+ CCHA AC+ ++ +CEGV CT +C P TLDC G+C C+
Sbjct: 2 IRKMKRTTILLLLFTAFLLTACKPQQKE-----------CITDSDCVPNKCCHATACVPKEKAPNCEGVFCTAECVPNTLDCNQGKCVCK 80
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A5E4JYK7_9ARCH (Uncharacterized protein n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4JYK7_9ARCH) HSP 1 Score: 68.2 bits (165), Expect = 2.880e-11 Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCGGRCHCELDTGKCTSSL 347
C+ D DCV CCHA AC+ + +C VMCTM+CR TLDCGG C C+ GKC + L
Sbjct: 134 CSTDGDCVAAECCHATACVPKSQAPNCADVMCTMECRGGTLDCGGSCVCK--EGKCNAVL 191
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A7J9Q649_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A7J9Q649_9ARCH) HSP 1 Score: 62.4 bits (150), Expect = 4.800e-10 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 3
Query: 147 NPDSHALCTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCG-GRCHCELDTGKCTSSLK 350
N A C+ D DCVP +CCH+ +CEG+MCTM+C+P TLDCG G C C +D KC + LK
Sbjct: 20 NVPEDAECSYDQDCVPASCCHSXXXXPAGESPNCEGMMCTMECKPGTLDCGQGFCMC-MDN-KCKAILK 86
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A9ENM2_SORC5 (Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9ENM2_SORC5) HSP 1 Score: 63.5 bits (153), Expect = 4.890e-10 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCE-GVMCTMDCRPLTLDCGGRCHCELDTGKCTSSL 347
C D+DCVP CHA ACI + C+ G+MCT +CRP T+DCGG C C+ G+C + L
Sbjct: 66 CKSDADCVPVCACHAAACIAKATAPMCDRGLMCTQECRPGTMDCGGGCLCQ--GGRCAARL 124
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A7J2JM83_9ARCH (Uncharacterized protein n=2 Tax=Candidatus Altiarchaeales archaeon TaxID=2250256 RepID=A0A7J2JM83_9ARCH) HSP 1 Score: 62.0 bits (149), Expect = 7.840e-10 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCG-GRCHCE 317
CT+DSDCVP+ CCH +C+++ +C G+MCTM C+ +DCG GRC C+
Sbjct: 32 CTKDSDCVPEQCCHPTSCVNKRFAPNCSGIMCTMVCQG-PIDCGAGRCVCK 81
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: S4XTL1_SORCE (Uncharacterized protein n=4 Tax=Sorangium cellulosum TaxID=56 RepID=S4XTL1_SORCE) HSP 1 Score: 61.2 bits (147), Expect = 3.440e-9 Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEG-VMCTMDCRPLTLDCGGRCHCELDTGKCTSSL 347
C D+DCVP CH AC+ + CEG +MCT +CRP T+DCGG C C G+C + L
Sbjct: 61 CQSDADCVPVCGCHPAACVAKATAPACEGGMMCTQECRPGTMDCGGGCLCH--EGRCAARL 119
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Match: A0A1I2ABZ6_9DELT (Uncharacterized protein n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ABZ6_9DELT) HSP 1 Score: 58.5 bits (140), Expect = 3.530e-8 Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 3
Query: 168 CTRDSDCVPDACCHARACIHRDLKRDCEGVMCTMDCRPLTLDCGGRCHCELDTGK 332
C D+DCVP +C + K DC VMCTM C P TLDCGG C CE + K
Sbjct: 64 CKVDADCVPASCXXXXXXVPAAQKPDCTDVMCTMQCAPNTLDCGGHCACEAGSCK 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10042.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10042.148.1 >prot_H-fluviatilis_contig10042.148.1 ID=prot_H-fluviatilis_contig10042.148.1|Name=mRNA_H-fluviatilis_contig10042.148.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=113bp MKIREILFIGVMLMIVIWFLLTPKQPSDAAPHSLNPDSHALCTRDSDCVPback to top mRNA from alignment at H-fluviatilis_contig10042:6787..7400+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10042.148.1 ID=mRNA_H-fluviatilis_contig10042.148.1|Name=mRNA_H-fluviatilis_contig10042.148.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=614bp|location=Sequence derived from alignment at H-fluviatilis_contig10042:6787..7400+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10042:6787..7400+ >mRNA_H-fluviatilis_contig10042.148.1 ID=mRNA_H-fluviatilis_contig10042.148.1|Name=mRNA_H-fluviatilis_contig10042.148.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=678bp|location=Sequence derived from alignment at H-fluviatilis_contig10042:6787..7400+ (Heribaudiella fluviatilis SAG_13_90)back to top |