mRNA_H-fluviatilis_contig10026.111.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.490e-70 Identity = 104/131 (79.39%), Postives = 117/131 (89.31%), Query Frame = 1 Query: 1 GVVGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVAAGSWRYGDE 393 G VGVIVCDHGSRRE AN MLFEVAERYR F+G ++VEAAHME+AEP+IE+AFD+CVAAGA K+VLHPFFLSPGRHVTSDIPALM AA RHPGV WV+SEPLGLQELMP+VMH AV +SVA G+WR+G E Sbjct: 85 GRVGVIVCDHGSRRENANTMLFEVAERYRSFSGFEIVEAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHGGE 215
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 141 bits (356), Expect = 8.070e-41 Identity = 71/118 (60.17%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 58 MLFEVAERYRYFAGCD--------VVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVAAGSWRYG 387 M+ EVA R+R A V+E AHME+AEPTIEQAFDKCVAAGA +VLHPFFLSPGRHV+SDIP L+ AA+RHPGV W +SEPLGL LMP++M+DAV ++ W+ G Sbjct: 1 MINEVAARFRQQAEASEAAAAAACVIEVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT) HSP 1 Score: 140 bits (352), Expect = 6.000e-40 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVA 366 +G+I+ DHGSRR ++N++L EV E +R AG +VE AHME+ EP+I QAF KCV GA +IV+HP+FLSPGRH DIP L + AAA HPG+ +++ PLGL LM KVM + ++ +A Sbjct: 11 LGIIIVDHGSRRAESNDLLLEVVELFRQTAGYKIVEPAHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERIETCLA 130
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 136 bits (342), Expect = 2.030e-38 Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSV 363 +G+IV DHGSRR ++N++L V + + + ++E AHME+AEPTIEQAFD+CV GA +V HPFFL PG+H DIP L AA +HPG+ W+++ P+G+ E MP VM+DA+ + Sbjct: 10 IGIIVVDHGSRRPESNDLLLAVVKLFAEQSDYPIIEPAHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A2S8FXQ9_9BACT (Cobalamin biosynthesis protein CbiX n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FXQ9_9BACT) HSP 1 Score: 135 bits (339), Expect = 5.620e-38 Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVA 366 +G+I+ DHGSRR ++N++L EV + +R AG +VE AHME+A P+I +AF KC GA +IV+HP+FLSPGRH DIP L + AAA HPG++ +++ PLGL LM KVM + ++ +A Sbjct: 11 LGIIIVDHGSRRAESNDLLLEVVKMFRQTAGYQIVEPAHMELAAPSIAEAFQKCADQGATQIVVHPYFLSPGRHWHEDIPRLAKEAAASHPGISHLVTAPLGLHPLMAKVMQERIETCLA 130
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A518DEM9_9BACT (Sirohydrochlorin ferrochelatase n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DEM9_9BACT) HSP 1 Score: 135 bits (339), Expect = 6.530e-38 Identity = 68/125 (54.40%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHD--AVQQSVAAGS 375 VG+IV DHGSRR+ +N +L EVAE +R +G ++VE AHME+AEP+I AFD+CV GA ++V+ P+FL PGRH DIPAL AAARHPGV+ +++ PLG+ L+ VM D AV + AAG+ Sbjct: 18 VGIIVVDHGSRRDASNALLLEVAELFRRQSGMEIVEPAHMELAEPSIATAFDRCVERGAKRVVVMPYFLGPGRHWDQDIPALSAKAAARHPGVSHLVTAPLGIDPLIAAVMEDRIAVCLTNAAGA 142
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA) HSP 1 Score: 136 bits (342), Expect = 6.910e-38 Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVA 366 VGVIV DHGSRR++ANE L VA ++ +G ++VE AHME+ EP+I AF +CV GA I+ HPFFLS GRHV DIP L+ AA+ PGV W +S+PLGLQ +P++M AV++ +A Sbjct: 57 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIA 176
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A2S8FL84_9BACT (Cobalamin biosynthesis protein CbiX n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FL84_9BACT) HSP 1 Score: 133 bits (335), Expect = 1.140e-37 Identity = 59/119 (49.58%), Postives = 88/119 (73.95%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSV 363 +G+I+ DHGSRR ++N++L EV E++R + +VE AHME+AEP+I +AF +CVA GAN+I++HP+FLSPGRH DIP L R A+A H GV++ ++ PLG LM K++ D ++ + Sbjct: 11 LGIIIVDHGSRRAESNDLLLEVVEQFRQTSDFGIVEPAHMELAEPSIAEAFARCVAQGANRIIVHPYFLSPGRHWHEDIPQLAREASANHAGVSFTVTHPLGPHPLMLKIIQDRIEDCL 129
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: UPI001E6555A8 (hypothetical protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E6555A8) HSP 1 Score: 133 bits (335), Expect = 2.210e-37 Identity = 61/120 (50.83%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVA 366 +G++V DHGSRR +NE+L +V + +R G ++VEAAHME+AEP+I AF KCVA GAN +++HP+FLSPGRH + DIP L AAA HPGV +++ PLGL M ++M + + +A Sbjct: 11 IGIVVVDHGSRRAASNELLLDVVQLFRQTTGREIVEAAHMELAEPSIAAAFAKCVAQGANLVIVHPYFLSPGRHWSEDIPRLAAEAAAAHPGVRHLVTAPLGLHTKMAEIMAERIDVCLA 130
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Match: A0A518DNN6_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DNN6_9BACT) HSP 1 Score: 132 bits (333), Expect = 2.230e-37 Identity = 62/123 (50.41%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 7 VGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEQAFDKCVAAGANKIVLHPFFLSPGRHVTSDIPALMRVAAARHPGVAWVISEPLGLQELMPKVMHDAVQQSVAAGS 375 VGV++ DHGSRRE++N ML EVA + + ++E AHME+AEPT++ AFD+C+A GA +IV+HP+FL PG H DIP L AAAR P V +V++EPLGL L+ +V+ D + ++A S Sbjct: 7 VGVVLVDHGSRREESNAMLLEVAAMFAQSSPYTIIEPAHMELAEPTLQTAFDRCIARGAEQIVVHPYFLLPGNHSREDIPRLAAEAAARRPDVPYVVTEPLGLHPLLGQVIRDRIAAALAENS 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10026.111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10026.111.1 >prot_H-fluviatilis_contig10026.111.1 ID=prot_H-fluviatilis_contig10026.111.1|Name=mRNA_H-fluviatilis_contig10026.111.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=136bp GVVGVIVCDHGSRREQANEMLFEVAERYRYFAGCDVVEAAHMEMAEPTIEback to top mRNA from alignment at H-fluviatilis_contig10026:4424..5594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10026.111.1 ID=mRNA_H-fluviatilis_contig10026.111.1|Name=mRNA_H-fluviatilis_contig10026.111.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=1171bp|location=Sequence derived from alignment at H-fluviatilis_contig10026:4424..5594- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10026:4424..5594- >mRNA_H-fluviatilis_contig10026.111.1 ID=mRNA_H-fluviatilis_contig10026.111.1|Name=mRNA_H-fluviatilis_contig10026.111.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=816bp|location=Sequence derived from alignment at H-fluviatilis_contig10026:4424..5594- (Heribaudiella fluviatilis SAG_13_90)back to top |