Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 268 |
| Cds size | 267 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928997.9953067-CDS-H-fluviatilis_contig100143:548..602 | 1622928997.9953067-CDS-H-fluviatilis_contig100143:548..602 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100143 549..602 - |
| 1691135144.7541702-CDS-H-fluviatilis_contig100143:548..602 | 1691135144.7541702-CDS-H-fluviatilis_contig100143:548..602 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100143 549..602 - |
| 1622928998.0096147-CDS-H-fluviatilis_contig100143:649..862 | 1622928998.0096147-CDS-H-fluviatilis_contig100143:649..862 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100143 650..862 - |
| 1691135144.7648032-CDS-H-fluviatilis_contig100143:649..862 | 1691135144.7648032-CDS-H-fluviatilis_contig100143:649..862 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100143 650..862 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100143.87.1 >prot_H-fluviatilis_contig100143.87.1 ID=prot_H-fluviatilis_contig100143.87.1|Name=mRNA_H-fluviatilis_contig100143.87.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=89bp
DGDRIVGGAAAWLRELGLTLQVVHVEGELDHPTKRARELARLPPVLPARL
RSPFLAGRKAPFANSWGYFLGERLKTQGFRELTAEDRKV back to topmRNA from alignment at H-fluviatilis_contig100143:548..862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig100143.87.1 ID=mRNA_H-fluviatilis_contig100143.87.1|Name=mRNA_H-fluviatilis_contig100143.87.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=315bp|location=Sequence derived from alignment at H-fluviatilis_contig100143:548..862- (Heribaudiella fluviatilis SAG_13_90)
GATGGAGACCGCATCGTGGGTGGTGCGGCGGCTTGGCTGCGCGAGCTCGG
ACTGACCCTGCAAGTGGTACACGTCGAGGGCGAGCTCGACCACCCCACCA
AACGCGCGCGTGAGCTGGCGCGCCTCCCGCCGGTGCTCCCTGCGCGGCTC
CGCTCGCCTTTCTTGGCAGGCCGGAAGGCTCCTTTCGCAAACTCGTGGGG
CTACTTCTTGGGGGTACTGCGAACCTTTGCCCTTGCCCTCTACACAGCTC
TGTTGTCCAGGAGCGGCTCAAGACACAGGGTTTCCGCGAGTTAACAGCCG
AAGACAGGAAGGTCT back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig100143:548..862- >mRNA_H-fluviatilis_contig100143.87.1 ID=mRNA_H-fluviatilis_contig100143.87.1|Name=mRNA_H-fluviatilis_contig100143.87.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=534bp|location=Sequence derived from alignment at H-fluviatilis_contig100143:548..862- (Heribaudiella fluviatilis SAG_13_90)
GATGGAGACCGCATCGTGGGTGGTGCGGCGGCTTGGCTGCGCGAGCTCGG
ACTGACCCTGCAAGTGGTACACGTCGAGGGCGAGCTCGACCACCCCACCA
AACGCGCGCGTGAGCTGGCGCGCCTCCCGCCGGTGCTCCCTGCGCGGCTC
CGCTCGCCTTTCTTGGCAGGCCGGAAGGCTCCTTTCGCAAACTCGTGGGG
CTACTTCTTGGGGGATGGAGACCGCATCGTGGGTGGTGCGGCGGCTTGGC
TGCGCGAGCTCGGACTGACCCTGCAAGTGGTACACGTCGAGGGCGAGCTC
GACCACCCCACCAAACGCGCGCGTGAGCTGGCGCGCCTCCCGCCGGTGCT
CCCTGCGCGGCTCCGCTCGCCTTTCTTGGCAGGCCGGAAGGCTCCTTTCG
CAAACTCGTGGGGCTACTTCTTGGGGGAGCGGCTCAAGACACAGGGTTTC
CGCGAGTTAACAGCCGAAGACAGGAAGGTCGAGCGGCTCAAGACACAGGG
TTTCCGCGAGTTAACAGCCGAAGACAGGAAGGTC back to top
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