Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 260 |
| Cds size | 258 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928997.4374251-CDS-H-fluviatilis_contig10012:2617..2655 | 1622928997.4374251-CDS-H-fluviatilis_contig10012:2617..2655 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2618..2655 + |
| 1691135144.419138-CDS-H-fluviatilis_contig10012:2617..2655 | 1691135144.419138-CDS-H-fluviatilis_contig10012:2617..2655 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2618..2655 + |
| 1622928997.455122-CDS-H-fluviatilis_contig10012:2784..2955 | 1622928997.455122-CDS-H-fluviatilis_contig10012:2784..2955 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2785..2955 + |
| 1691135144.4341109-CDS-H-fluviatilis_contig10012:2784..2955 | 1691135144.4341109-CDS-H-fluviatilis_contig10012:2784..2955 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2785..2955 + |
| 1622928997.4717147-CDS-H-fluviatilis_contig10012:3402..3451 | 1622928997.4717147-CDS-H-fluviatilis_contig10012:3402..3451 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 3403..3451 + |
| 1691135144.4442258-CDS-H-fluviatilis_contig10012:3402..3451 | 1691135144.4442258-CDS-H-fluviatilis_contig10012:3402..3451 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 3403..3451 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10012.83.1 >prot_H-fluviatilis_contig10012.83.1 ID=prot_H-fluviatilis_contig10012.83.1|Name=mRNA_H-fluviatilis_contig10012.83.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=86bp
FEYRVYATGVRLGAALARQNTEAANVIPIASVARKREGRLICECDRNMGK
DTHKLTQGQIDRHENSVQHNDEEVLITRVEPPPSPL back to topmRNA from alignment at H-fluviatilis_contig10012:2618..3451+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig10012.83.1 ID=mRNA_H-fluviatilis_contig10012.83.1|Name=mRNA_H-fluviatilis_contig10012.83.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=834bp|location=Sequence derived from alignment at H-fluviatilis_contig10012:2618..3451+ (Heribaudiella fluviatilis SAG_13_90)
TTTGAATATCGAGTATATGCGACTGGGGTGCGACTGGGGTAAGAAAAGGT
GCCATCGGTGGCCTGAGCGGACGAGCTCGCTGTCATCACCATGCCCGAAT
GCAGCCACATTCACATTGCTCTCACCCGGCCACGGCCGTGACTGATTGAT
TTGATCGTGTACGGCAGGGCAGCGCTTGCACGCCAAAATACGGAAGCGGC
GAACGTGATTCCGATTGCATCAGTCGCGAGAAAACGGGAGGGCAGGTTGA
TCTGCGAGTGCGACCGTAACATGGGCAAGGATACCCACAAACTTACCCAG
GGCCAGATCGACAGGCACGAGAATTCGGTTCAACACAAGTGAGTTCGCGA
CCGTATTGCCTCATGATATCGATCTCTAAACTTGTAAGCAAATGAATAGA
AGGGGCTCAAGTGGTCATGAGTTGTTAAATCGGGCGTTCTAACTAGCATT
TTCTCAGACAAACTCTTTAGGTGTTTCCAATCGTGTAGTGATGCATTCCA
TTATGTAGGCGTGAAACATTCGACACACCTTGTTCTGTTATCTGCACGGT
TCTCGTTGAGCTGGGAGCGAATGAAACGGCAGAAAGGTGAGAGATCAACC
CGTTTGATATGGGATTTTGTCCGCAAACCTCCCCCTGCAACGGGGACGGC
GCAGGGAAATAGCGTCGATGCCAGGCCAGATCCCGCGCCTGAAGGTAGGC
AGGAAACAGGGTCTGACACAAATGATCAGCTGGGAACGACCAGAGATTCG
CTGACGCCTCCAGTTCAATCCCCTTCTTCTGACAGCGATGAGGAGGTCCT
CATTACGAGAGTCGAGCCGCCGCCCTCCCCCCTT back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig10012:2618..3451+ >mRNA_H-fluviatilis_contig10012.83.1 ID=mRNA_H-fluviatilis_contig10012.83.1|Name=mRNA_H-fluviatilis_contig10012.83.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=516bp|location=Sequence derived from alignment at H-fluviatilis_contig10012:2618..3451+ (Heribaudiella fluviatilis SAG_13_90)
TTTGAATATCGAGTATATGCGACTGGGGTGCGACTGGGTTTGAATATCGA
GTATATGCGACTGGGGTGCGACTGGGGGCAGCGCTTGCACGCCAAAATAC
GGAAGCGGCGAACGTGATTCCGATTGCATCAGTCGCGAGAAAACGGGAGG
GCAGGTTGATCTGCGAGTGCGACCGTAACATGGGCAAGGATACCCACAAA
CTTACCCAGGGCCAGATCGACAGGCACGAGAATTCGGTTCAACACAAGGC
AGCGCTTGCACGCCAAAATACGGAAGCGGCGAACGTGATTCCGATTGCAT
CAGTCGCGAGAAAACGGGAGGGCAGGTTGATCTGCGAGTGCGACCGTAAC
ATGGGCAAGGATACCCACAAACTTACCCAGGGCCAGATCGACAGGCACGA
GAATTCGGTTCAACACAACGATGAGGAGGTCCTCATTACGAGAGTCGAGC
CGCCGCCCTCCCCCCTTCGATGAGGAGGTCCTCATTACGAGAGTCGAGCC
GCCGCCCTCCCCCCTT back to top
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