Homology
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
D7FKT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT2_ECTSI)
HSP 1 Score: 290 bits (742), Expect = 1.110e-87
Identity = 145/184 (78.80%), Postives = 166/184 (90.22%), Query Frame = 1
Query: 1 SVQGGVDSTQFKAKKTVFRQAERTEGGQTVQVAVDGFRCSTYQYLGSMQMRSVSGASSMFPRPFWKSSQDLNQEKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRAGTVDKVNFIVPSEYKRSRRMSKELYIAGV 552
S +GGVDSTQFKAKKTVFR++++ +GGQ VQ + G++CSTYQYLGSMQM+ V SSMF +PFWK++ DLN++KVHRQINKQVKATVWMAHDYPLKLKHIMPALEILS+RDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFR+ +D NF++PS+Y RSRRMSKE YIAGV
Sbjct: 47 SNKGGVDSTQFKAKKTVFRESQKLDGGQQVQAVMAGWKCSTYQYLGSMQMKGVG--SSMFQKPFWKNNPDLNEDKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYHRSRRMSKEKYIAGV 228
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A6H5KD68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD68_9PHAE)
HSP 1 Score: 268 bits (685), Expect = 2.250e-75
Identity = 144/238 (60.50%), Postives = 170/238 (71.43%), Query Frame = 1
Query: 1 SVQGGVDSTQFKAKKTVFRQAERTEGGQTVQVAVDGFRCSTYQYLGSMQMRS------------------------------------------------VSGA------SSMFPRPFWKSSQDLNQEKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRAGTVDKVNFIVPSEYKRSRRMSKELYIAGV 552
S +GGVDSTQFKAKKTVFR++++ +GGQ VQ + G++CSTYQYLGSMQM++ V+G SSMF +PFWK++ DLN++KVHRQINKQVKATVWMAHDYPLKL+HIMPALEILS+RDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFR+ +D NF++PS+Y+RSRRMSKE Y+AGV
Sbjct: 1251 SHKGGVDSTQFKAKKTVFRESQKLDGGQQVQAVMAGWKCSTYQYLGSMQMKTTRKGANVVQYVPKDMYFDSRGEKPLLAKAKEAIAREEAATAAGAGXXXVAGGLRKGVGSSMFQKPFWKNNPDLNEDKVHRQINKQVKATVWMAHDYPLKLRHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYQRSRRMSKEKYVAGV 1488
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
UPI000644BE56 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BE56)
HSP 1 Score: 72.0 bits (175), Expect = 7.550e-10
Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 241 NKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRAGTVDKVNFIVPSEYKRSRRMSK 531
+K + TVW++ ++P K+ I+P E+LS + RL +SL P +GFPVK +P++ T+ A VTF N+ VDK F +PS++ +++++ K
Sbjct: 356 HKNFEGTVWISQEFPRKITDILPIFEVLSPTHKLFGRLSDFISLK-FPSDGFPVKFDIPVLPTITATVTFNNYVEKEVDKCQFELPSDFVKTKQLLK 451
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A2G9H5H1_9LAMI (Ankyrin repeat protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H5H1_9LAMI)
HSP 1 Score: 63.9 bits (154), Expect = 3.710e-7
Identity = 34/88 (38.64%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 196 KSSQDLNQEKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 459
KS +D+ Q+K + K ++ T+W++ D+PL+++ +P L+IL R RLR L+ +PQ FPVKVS+P++ T++ +VTF F
Sbjct: 431 KSERDIIQDK---EFKKNLRPTLWLSSDFPLRIEEFLPLLDILENRVTAIRRLREYLT-TKLPQGTFPVKVSIPVVPTIRVIVTFTKF 514
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A6J0KSN1_RAPSA (ankyrin repeat domain-containing protein 13B-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KSN1_RAPSA)
HSP 1 Score: 62.8 bits (151), Expect = 7.780e-7
Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 232 RQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRA 465
++ K + +VW+ +D+PLK + ++P L+IL+I + R+R +L++ P FPVK+S+P++ TVKAV+TF F A
Sbjct: 361 KETAKSLSPSVWLTNDFPLKTEELLPLLDILAINVEAVRRMRELLTVK-FPAGSFPVKLSIPVIPTVKAVMTFSKFVA 437
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A6V7QDS5_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QDS5_ANACO)
HSP 1 Score: 62.4 bits (150), Expect = 9.280e-7
Identity = 31/76 (40.79%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 232 RQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 459
+++ K ++ TVW+ D+PLK++ IMP L+ILS + RLR L+ A P FPVK+++P++ TV+ V+TF +
Sbjct: 274 KEMVKSLRPTVWLTEDFPLKVEEIMPLLDILSSKVKAVRRLREFLT-AKFPPGTFPVKIAIPVVPTVRVVITFTKY 348
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
F4Q3Y2_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q3Y2_CAVFA)
HSP 1 Score: 62.0 bits (149), Expect = 1.360e-6
Identity = 29/93 (31.18%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 241 NKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRAGTVDKVNFIVPSEYKRSR 519
+K + VW+++++P K+ ++P E+L+ + + +RL +SL P EGFPVK+ P++ T+ A VTF N+ +D +F +P ++ + +
Sbjct: 418 HKNFQGCVWISNEFPRKITDLLPIFEVLTPTNKLFSRLSEFISLK-FPMEGFPVKLDFPVVPTITATVTFNNYIEKEIDPQHFEIPVDFIKKK 509
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A1S2XWF0_CICAR (ankyrin repeat domain-containing protein 13C n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XWF0_CICAR)
HSP 1 Score: 62.0 bits (149), Expect = 1.600e-6
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 214 NQEKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 459
N+ K + K V+ +W+ D+PLK ++P L+IL+ + RLR +L+ +PQ FPVKV++P++ T++ +VTF F
Sbjct: 465 NESKSESEFKKGVRPVLWLTQDFPLKTDELLPVLDILANKVKAIRRLRELLT-TKLPQGTFPVKVAIPIVPTIRVIVTFTKF 545
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A2K3N2X3_TRIPR (Ankyrin repeat domain-containing protein 13B-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N2X3_TRIPR)
HSP 1 Score: 61.2 bits (147), Expect = 1.770e-6
Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 136 GSMQMRSVSGASSMFPRPFWKSSQDLNQEKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 459
G ++ S G + K + N+ K + + V+ +W+ D+PLK ++P L+IL+ + RLR +L+ +PQ FPVKV++P++ TV+ +VTF F
Sbjct: 169 GHVEKNSKKGKDQNLKKKXXKGAS--NESKSESEFKRGVRPVLWLTQDFPLKTDELLPLLDILANKVKAIRRLRELLT-TKLPQGTFPVKVAIPIVPTVRVIVTFTKF 273
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Match:
A0A8B8M724_ABRPR (ankyrin repeat domain-containing protein 13B-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M724_ABRPR)
HSP 1 Score: 61.6 bits (148), Expect = 1.930e-6
Identity = 28/66 (42.42%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 262 VWMAHDYPLKLKHIMPALEILSIRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 459
+W++HD+PLK++ ++P L+IL+ + RLR +L+ +P+E FPVKV++P++ TV+ +VTF F
Sbjct: 409 LWLSHDFPLKIEELLPMLDILAEKVKAIKRLRELLTTT-LPKETFPVKVAIPVVSTVRVLVTFTRF 473
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10011.81.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.11e-87 / Id = 78.80 Expect = 2.25e-75 / Id = 60.50 Expect = 7.55e-10 / Id = 36.08 Expect = 3.71e-7 / Id = 38.64 Expect = 7.78e-7 / Id = 39.74 Expect = 9.28e-7 / Id = 40.79 Expect = 1.36e-6 / Id = 31.18 Expect = 1.60e-6 / Id = 36.59 Expect = 1.77e-6 / Id = 31.48 Expect = 1.93e-6 / Id = 42.42 Sequence D7FKT2_ECTSI A0A6H5KD68_9PHAE UPI000644BE56 A0A2G9H5H1_9LAMI A0A6J0KSN1_RAPSA A0A6V7QDS5_ANACO F4Q3Y2_CAVFA A0A1S2XWF0_CICAR A0A2K3N2X3_TRIPR A0A8B8M724_ABRPR Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 292.4 Seed ortholog evalue 4e-76 Seed eggNOG ortholog 2880.D7FKT2 KEGG ko ko:K21437 GOs GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006621,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0010941,GO:0012505,GO:0019222,GO:0031323,GO:0032507,GO:0033036,GO:0033365,GO:0034613,GO:0035437,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0048471,GO:0050789,GO:0050794,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0072595,GO:2000209 EggNOG free text desc. protein retention in ER lumen EggNOG OGs KOG0522@1,KOG0522@2759 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko04131 Hectar predicted targeting category other localisation Exons 7 Model size 1437 Cds size 1437 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928997.2262366-CDS-H-fluviatilis_contig10011:1623..2136 1622928997.2262366-CDS-H-fluviatilis_contig10011:1623..2136 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 1624..2136 - 1691135144.2466145-CDS-H-fluviatilis_contig10011:1623..2136 1691135144.2466145-CDS-H-fluviatilis_contig10011:1623..2136 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 1624..2136 - 1622928997.242789-CDS-H-fluviatilis_contig10011:2973..3132 1622928997.242789-CDS-H-fluviatilis_contig10011:2973..3132 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 2974..3132 - 1691135144.2830114-CDS-H-fluviatilis_contig10011:2973..3132 1691135144.2830114-CDS-H-fluviatilis_contig10011:2973..3132 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 2974..3132 - 1622928997.2572722-CDS-H-fluviatilis_contig10011:3668..4028 1622928997.2572722-CDS-H-fluviatilis_contig10011:3668..4028 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 3669..4028 - 1691135144.2983506-CDS-H-fluviatilis_contig10011:3668..4028 1691135144.2983506-CDS-H-fluviatilis_contig10011:3668..4028 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 3669..4028 - 1622928997.2683067-CDS-H-fluviatilis_contig10011:4314..4386 1622928997.2683067-CDS-H-fluviatilis_contig10011:4314..4386 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 4315..4386 - 1691135144.3160262-CDS-H-fluviatilis_contig10011:4314..4386 1691135144.3160262-CDS-H-fluviatilis_contig10011:4314..4386 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 4315..4386 - 1622928997.2804146-CDS-H-fluviatilis_contig10011:5050..5158 1622928997.2804146-CDS-H-fluviatilis_contig10011:5050..5158 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 5051..5158 - 1691135144.328194-CDS-H-fluviatilis_contig10011:5050..5158 1691135144.328194-CDS-H-fluviatilis_contig10011:5050..5158 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 5051..5158 - 1622928997.292011-CDS-H-fluviatilis_contig10011:5998..6070 1622928997.292011-CDS-H-fluviatilis_contig10011:5998..6070 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 5999..6070 - 1691135144.3389628-CDS-H-fluviatilis_contig10011:5998..6070 1691135144.3389628-CDS-H-fluviatilis_contig10011:5998..6070 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 5999..6070 - 1622928997.311962-CDS-H-fluviatilis_contig10011:7120..7273 1622928997.311962-CDS-H-fluviatilis_contig10011:7120..7273 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 7121..7273 - 1691135144.3492987-CDS-H-fluviatilis_contig10011:7120..7273 1691135144.3492987-CDS-H-fluviatilis_contig10011:7120..7273 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10011 7121..7273 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10011.81.1
>prot_H-fluviatilis_contig10011.81.1 ID=prot_H-fluviatilis_contig10011.81.1|Name=mRNA_H-fluviatilis_contig10011.81.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=479bp
SVQGGVDSTQFKAKKTVFRQAERTEGGQTVQVAVDGFRCSTYQYLGSMQM back to top mRNA from alignment at H-fluviatilis_contig10011:1624..7273-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10011.81.1 ID=mRNA_H-fluviatilis_contig10011.81.1|Name=mRNA_H-fluviatilis_contig10011.81.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5650bp|location=Sequence derived from alignment at H-fluviatilis_contig10011:1624..7273- (Heribaudiella fluviatilis SAG_13_90)TCGGTTCAGGGGGGCGTGGACAGCACGCAGTTTAAGGCCAAGAAGACGGT
GTTCAGGCAGGCAGAAAGGACGGAGGGAGGACAGACCGTTCAAGTCGCCG
TCGACGGTTTCAGATGCTCTACGTACCAGTATCTCGGCAGCATGCAGATG
AGG GTAGGTCATCCGTTTTCAGTGTTTACGCCTTTCATGTACCGTAACCA
ACAACTTGAGGACCAGTGACGCCAAATGGAATTCAGGAATGACAATGCGC
CCGGGGAGTGACAATGACGCTTGCTTCGCTTGCCAACACGCCAGTGCGAA
TATTGAGCAAACGAAGAAAACGCTTCCTCGTGACCTTCACCGTCAACTTT
ACCGTGTTTGAGAACATGGACACGCCGATGGCCTTTTTCTGAGCAAGCGT
TTTACTGGAATGACCCGACACACACGACAGCCGACTGCTGACAAGCGCTT
TACTTCTATATCCCGACACACAACAGCCGACTGCTGGTTGGAATGTCAGT
GTCCGGGCAGTTTCGGTTGTATCGTGTGATTTAGTTTTGGGTAGAGGTGG
GTGGATGTGGGTCTGGTTGGCGGGGGACTGTCGCGGTGCGGTACCGACGA
GTCATCTTGTGTACTAGTTTGGAGCGCGCAGCCCGTGCGGAGTTGCTCTT
CACGTGCATGCTTGCTGCCGTTTACGTTCCGCATTTTCATGTCCATCCTC
GGAATGGAAGTACATGTTGTGAGAGACGGAACGAGATTGTGTGCCTCGTG
ATGTATACTATCGTAGAGGAAGGTAGCGCGTAAGAGACAGCTAACGATGG
CGTTCCAACGGCATCTGGCATGTTTCAAGAGAGTGAATTCCAGCAGAAAA
CATGCCAACTAATGAGCAAGTTTCAGAATCACTTGTAAGCATCAACAGAA
GTCAAAGAAACAAAAGCATCACTATCACCATAGACATAGACACCTGTGTT
CAACAAACAAGAAAAATGAAGCCCATGCCGTCAAAAGCTTAGTGACCCCC
CCCCTGCTGTCCTCACCTGCCCTCCTCGTCCTCTCGATGTGGACCAACAG
ACGGTACGGAAGGGCGGCAACGTGGTACAGTATGTCCCAAAGCACAGCTA
CTTCGACCAACAAAGCGAAAAGTCTCTGCAGAAGAAGGCTGAGGAGGCGA
TAGCGCAGCAGGAGAAGCAAGGGCATGCCGGGGGTATGGTGGGCTCGCGA
AAGAGCGTGTCGGGGGCATCCAGCATGTTCCCGCGACCTTTCTGGAAGAG
CAGTCAAGACTTGAATCAGGAAAAA GTAAGCGTGTGTTGGCAGGGGGGAA
AATAGGACAACAAAAGAGGGTTTTGTTTGTTTCGTTTTGTCTTTTGCCCG
TACTTGTCCGCGACCGCTTCGAAGGCATTGTTGGGTAGTTGCACGTGGAA
AATGACCGAGTGAGATATGTCTAGTACTGCAAAAAATAAAATGGAGAAAG
AGGCGAAATAAAAAAGGAAACGTAGTGATGATGTGATGGATTTGGAGTGT
TCTTTCTACACGCCGTAGTGTACAGCGACTGAGACCTCTTGTTTCTAGGT
GCGGTGTGGTGTACGGCTGGTCCTGCGGTGCATACGGTATGGCATCATAT
GGTTGTCCATCGCGGAACAGCAGCCAAAGGGCGTCCGTGTGCTAATCTGG
GAACCAAAACTGTTTTTTTCCACGGGAAAAAAACGTGTCAGATGTAAAGT
GGCCACTTGTGTTTTAATAGCGCCCAACACATCTTTGCGTGCCCGGAAGC
GTTTCGCCGGAAGTCGTGCAAACGAGCCACGAGTGTTGCGTTGTGCTTCG
GCAAACGGCGGAGCGTTGTCCGTTTCATCCTGTGCTCGGGAAGATAATTA
AAGAGCATTCCCATAATAGGATAGGTTCAAATCAAGTAGCAGATTGAACT
CAGACATTGTCCTTGTCCAAAGCGCTTGCCACGGGCAGGGTACGATTCGG
CATCGTCTGTGTGCGTATTGCATGCACAGAGAGCGTTAAATACTACCATC
TCTTTGGTGTGTGACACGGACTACTGTACTGTAGGTGTAAATGAATTTCC
CACTTTTTTCTCAACGTGTGTACTGCATGTGTGGGTCTACTTGCTTCGCC
ATTTGTTCTGCGCAGGTACACCGGCAGATCAACAAGCAAGTGAAGGCGAC
GGTTTGGATGGCACACGACTACCCGCTCAAGCTCAAGCACATCATGCCTG
CCTTGGAGATTCTTTCCATTAGG GTAAGCGAGCGCGGTGCGATCGATTCG
TCATCCTTTTTTTTTTTTTTCAAACGCGAAACGTAGTCATGTCGTTCTTG
TACCGCTTCTAGTTCCGTGAATCGACGTCAACAATTTTTTCCCAGCGATG
ATTGTGGGGGTAAAATACGCGTAGGCTTCTCGCGCTGGCGCGCATCTGTG
CAGCCGAGAGCCGTTCACGTGCGGCGTCGCCCGGTTTCCGTTTGGGCATC
GTTCGGGTAACATTGTCGATCGTCCTAGGCATGAGCTTAAAGTCTGATCC
CGATCGTTGCTTGTATTTCCCAGGCTAAATGCGCACGTGTTGCAACGCAT
TTTCTGCGTTGCCAACTTTTTCCATCTGTTATCAGCATAATCGCTCGTCC
ATCTCGAGATTTTTTTTCTTGCATGGCCACCCACCCGTTGACAATCTTGG
TTGTATGCATAACCATTGTTGCACACACGTGCATAGTTCCCGTGTCTTTT
GACGTGCGGTCGTCGTTCCAAGGGTAAGGGTGTGATGTCCTCAAACCCAA
CACAGTCCTGGCGAGCGCAAGCGAGCCGCCTGACTACGCCGGCGAAGCCG
TAGCAGAACTGCTAGTGTTTCCCCTTCATGATTACCCCAGTGCGCTTATG
GTAGCTCCCCCCCCCCCCTCCCCCATACTGTATCCAGGATGACATGGCCG
CGCGTCTGCGTTCAGTGTTGTCTCTAGCTGGGATTCCGCAGGAAGGGTTT
CCCGTCAAG GTGGGCCCAGATATGTAGGACCGTATGTTGCGGTTCGTTGT
GCGTGAGGGCAACGTGTCATATGCATGTACGTTTGATCGTCTCTATCTTC
GCACACATCTGCGCTAGCCGTTGCGCGTAGATGTTGGCGTGGGCGAACGC
CGACTTGACGAGGAAGATATTGCCGAGTAAACCAGTTTGAGAGGAGTTCG
CGTCAGAGTAGAACCAGGCAAACGAACGACTAACGTACAGGCATGTATAT
CTACCCCCGCACCCCTTGGCTGAAATTTTCCGTACCAACTATAAGGTTTC
GGTGCCGCTGATGATGACGGTCAAAGCTGTCGTAACTTTCGAGAATTTCC
GAGCCGGCACCGTAGACAAGGTGAACTTTATCGTACCGTCCGAGTACAAG
CGATCGCGACGCATGTCGAAAGAGCTGTACATCGCGGGCGTTTCGGGCGC
CGCGGCCGGAGGGGCCATCGGGGGAGACGCCGGTGGTGGCGCAGCCGGCG
CGTTTGAGACGGACGATGACGATGATGACGAGGACGTGGTAGAGGATGAC
GACGAGGACGAAGGCGTTCATGGAGAGGCAAGGGGGGAACTGAGCGATAG
AGAGATCATGAGAAGGCGTGCTGCTGCTGGAGAAGGGTTCGACGACGATG
AAGAG GTACGATTGAGAGCGTTTTGTTCGTTTGGCGGTTCACGTTGTGTG
TACGGTCAGGTTGTCGCAGAAACGTTCGCTATTGGTGCTACCGAAAGGTT
TCACGTTGTGTGTCACCGACTTTGTGCGCCAGCTGAACGCTTGTAAGAAT
CTTCTTATAGGAGCGAGTACCATGTGCTCCTTCGAGTGAATGCAACGCTG
GCTTACTACACAACCATGGCTTCAATGAATCGGCCGGATTGACGGGATGG
GCGATCGTCAAAGTTCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGTCGCA
TGTTGAAAACATCCCCTCGAATTTTCCTCTATGTGTTCATGGGACGAAGC
TCGCGCCCCGCCTCTCAGTGGACACCCCTGAGAGTGTAAGACGGTGGTGG
AATTGCGAGTTCGGCACGTCAAACGCATTTAAGCTGCCTTCTCGTTTGGG
GTGATAATGCATGATCGCCTTTATCCCCCGCCTGCTCCCCCTCTCCCCCC
GCCCGCCGATCTTAATTACCGTTTGTTTTTTCTTGTCGCAGGATGAAGAC
ACTGATTTCGACGACGACTTCAGCGATCAAGACACTCAGTCGCCGCAGAC
AGGCGCAAGCGCCATACCGACCCGACGTCGGAGTAGTCTGGAGTCTCGGC
AGTCCCAATCCCCAAGAAGAAGGGGTCGCAGTCCCGCGCGAAGGGTGAGG
GTAGCAATTTTTGATGTTAATGATTGCGATTCGAGGGCCAAAAACAAATG
ATCTGAGCTTCCACCCCCACGGTCGTTGTTTTTTAGTGCTGAAGGTGTGG
CTACCACTCTTATTTCATCAGAAAATCGTGATGGCAATGGTGTTGGCATC
CAATGTTGTCTCACGCTTCCTTCGCGCTTAGTCTGTTTTGGCGAGCGACG
TGAGCCTATCGGCGAAGCGGCATACAAGTGCTGGTACTGTAGATATGATC
GCGTGTTCTGCGATGAGATCACGAAGTGTTTCATTCCGCCCCTTGTCGTG
GGATGATGTGGATGGTGGCAGTGGTGATGACGGTAGCGCTCGGGTATCGA
AAATGATGGTGCCGTGCGTTCCACCCGAGAAAATGTAGCTATCCTCACTT
TACCCGAGTTACATGCCCTGTAATGTGCCACTATGAAAACGGAAAATCGG
AATTGTATTTTCTGTGAAGTCCCTATTTTTCGTACTATTGAGCTAGAGTG
GGACGAACGACACAAGCGCGCACGTTATTTTTCCGGTCGAAAGCCTTTCT
CTGCTCCTAAGTGCTCTCCGCATGGAACGAACGGGGCGGTCTCTGGCGTT
GTAAAGCGCAACTTTTTTTCGACTTGACAGTGCCCTGTCAACTTTGCTTC
GTCAATAAGCGAAACAAACACGAAATAACGTGGACAACGACGGCTTCCGA
CGGCCCAAGTCATGCACCTCATCCGAGGCCCGTTAGTCTGTATGTCGCCC
CCGTTGAAATTGTTTCTCGTCCCATACCTTTCCCTCCCTTGGAAACATGT
GCTCGAAAACTCGTATTTCACTCAACAGTCACCAGAGATGAAGGCAACAG
GGAACGCCGCGACCAGCTCGGCCACAAAAGAAAGGAGGAACGCCGCATCT
GCATGGACGGGCACATCAACAGGGAGTAGTGACAACGCCGGGCGAGGCCG
CGCTGCCCAAAACGACGCTCATTGTGGTAATGGTAACGGTGGCTCGAAAT
CCGGTGGACATACCCGCGGGCGGTCCATGGGTGCTTCGTTATCCATGAGA
AATCCGGCCAGTGACGAAAAAACTAGAAGCGGACGTAGCAAATCACGCAG
TCGGCGATTAGTTTCCCAGCTCAAAGACATGGTAGGCGGGAAGCACAAGC
GAAGAGGATCGATGAACAGAGGAGGTTCGTTCAGCGACGAAGAAGACGAA
GATTCCTTCGAAGACTCCGACTTGGACGGAGCCGCAGGCGGAGGGCAGGG
CGGAGGAGGCGGGGGCACACTTACCGTAGCGTCACAAGCCGCTGCTTTGC
CGGACAAACGCGGACATCGGCGGGTATCGTCAGCGTCGGCCTCCCTCGGT
back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10011:1624..7273-
>mRNA_H-fluviatilis_contig10011.81.1 ID=mRNA_H-fluviatilis_contig10011.81.1|Name=mRNA_H-fluviatilis_contig10011.81.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=2874bp|location=Sequence derived from alignment at H-fluviatilis_contig10011:1624..7273- (Heribaudiella fluviatilis SAG_13_90) back to top