mRNA_H-fluviatilis_contig100032.69.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.500e-55 Identity = 95/143 (66.43%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 16 GGIRVRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREG---NEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 G I VRYTEDGKQ+PIGNGGVT RYYWTQTV EATVYVDVP GTRSKDVTC I+PR LKL+V GAG + V+ DGELP+AVSR+DSMWSLNDG TVVI EK+ +SWW+SVV+GDPEIDT+KV Sbjct: 189 GCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKV 331
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK) HSP 1 Score: 138 bits (348), Expect = 6.710e-37 Identity = 65/139 (46.76%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 19 GIRVRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 G+ VRYT++G QIPIGNGG+T YYWTQT+ E T+YVD+P GTR+KD+ I P +K+++ E II+GE P + +SMW+L D T+VI LEK ++WW SV+KGDPEID KV Sbjct: 172 GLEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKA--------------------ESEAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKV 290
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN) HSP 1 Score: 133 bits (335), Expect = 2.020e-35 Identity = 60/136 (44.12%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 28 VRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 V+ T+ GKQ+PIGNGG+T +Y WTQT+ + TV V VPEGT +K + C I P+RL++ V + + KN + V++DGE P + D+S+WSL +G+T+ + LEK +++WW SV++GD EIDT++V Sbjct: 133 VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSSTHSTKNPS------------VVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEV 256
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.640e-33 Identity = 64/141 (45.39%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 28 VRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDG-----NTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 V+YT+ GKQ+PIGNGGVT RY WTQT+ E TVY+ VP+GTR+ D+ C+I P++L+L++ E I+DG++P V D+SMW + D TVVI L+K K++WW+ VV GDP ID T V Sbjct: 171 VKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLK--------------------KEPEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMV 291
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: K3X6D0_GLOUD (CS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6D0_GLOUD) HSP 1 Score: 115 bits (289), Expect = 4.460e-30 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 55 IPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 +P+GNGG T Y WTQ++ + T+Y+D+P+GTRSKD+ C I ++ +A KNT + ++DGELP V D+S+WS+ T+ I LEK K++WW S +KGDPEIDT +V Sbjct: 7 VPVGNGGSTETYTWTQSLDDTTIYIDLPDGTRSKDLDCKITSSHIR--------VALKNT------------ETPLLDGELPEKVRSDESLWSIESNQTLQISLEKIKKTWWASALKGDPEIDTNQV 113
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A6A3ZNN1_9STRA (CS domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ZNN1_9STRA) HSP 1 Score: 116 bits (290), Expect = 8.030e-29 Identity = 55/133 (41.35%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 37 TEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 TEDGKQ+P+GNGGV Y W QT+ + ++ +++P+GTR+KD+ C IE RL+ +A K+ + +++GELP + D+S+WSL +T+ I LEK K +WW + +KG PEIDT+KV Sbjct: 129 TEDGKQVPVGNGGVAANYTWAQTLEDVSIQMELPQGTRAKDLNCRIESTRLR--------VAMKSDPGKP-----------LLEGELPEKIRADESIWSLESNHTLNISLEKIKPTWWATALKGGPEIDTSKV 242
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: H3HD16_PHYRM (CS domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD16_PHYRM) HSP 1 Score: 113 bits (283), Expect = 9.110e-29 Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 37 TEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 TE GKQ+P+GNGG TP Y WTQT+ + ++ +++ +GTR+KD+ C IE +L++ + D +++GE P + D+S+WSL +T+ + LEK K +WW S +KG PEIDT++V Sbjct: 32 TEQGKQVPVGNGGATPTYTWTQTLEDVSIQMELAQGTRAKDLNCRIESTKLRVALKSDPDKP-------------------LLEGEFPEKIRADESIWSLESNHTLNVSLEKIKPTWWASALKGGPEIDTSQV 145
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A7S1VZ48_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VZ48_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.280e-28 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 28 VRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 VRYTE+GKQ P+GNGG T RY WTQT+ E +V + VPEGTR KD+ I+ L + + E S ++++G+L + D+S WSL +G +V+ L+K K++WWE+V+ GD +IDTT V Sbjct: 18 VRYTEEGKQKPVGNGGSTNRYRWTQTINETSVIIGVPEGTRGKDLDVIIKASSLSVRLTKGPPKKENEDEAPSP---------ILLEGDLVEKIRTDESTWSL-EGGALVLTLDKVKKTWWETVLIGDEKIDTTLV 143
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A7S1G4E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4E3_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.710e-28 Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 37 TEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 T +GKQ+P+GNGGV RY+WTQT+ E TV+VDVP GTR KD+T + + + + G +++G+L + +++W+L G ++I LEK+ WW +VVKGD EID TKV Sbjct: 1 TAEGKQVPVGNGGVCERYWWTQTLEELTVHVDVPAGTRGKDLTVTTTASTIAVALRGRATP--------------------LLEGDLDERIRAGETLWTLEGGRALIIHLEKADERWWRTVVKGDAEIDATKV 113
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Match: A0A6A4FIF2_9STRA (CS domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FIF2_9STRA) HSP 1 Score: 113 bits (283), Expect = 8.010e-28 Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 37 TEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRSKDVTCSIEPRRLKLEVLGAGDIAEKNTTRESVGGREGNEKYVIIDGELPTAVSRDDSMWSLNDGNTVVIFLEKSKRSWWESVVKGDPEIDTTKV 435 TEDGKQ+P+GNGGV Y W QT+ + ++ +++P+GTR+KD+ C IE RL++ + +S G+ +++GELP + D+S+WSL +T+ I LEK K +WW + +KG PEIDT++V Sbjct: 125 TEDGKQVPVGNGGVAANYTWAQTLEDVSIQMELPQGTRAKDLNCRIESTRLRVVM-------------KSDPGKP------LLEGELPEKIRADESIWSLESNHTLNISLEKIKPTWWVTALKGGPEIDTSQV 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100032.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100032.69.1 >prot_H-fluviatilis_contig100032.69.1 ID=prot_H-fluviatilis_contig100032.69.1|Name=mRNA_H-fluviatilis_contig100032.69.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=146bp AAEPVGGIRVRYTEDGKQIPIGNGGVTPRYYWTQTVTEATVYVDVPEGTRback to top mRNA from alignment at H-fluviatilis_contig100032:30..858+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100032.69.1 ID=mRNA_H-fluviatilis_contig100032.69.1|Name=mRNA_H-fluviatilis_contig100032.69.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=829bp|location=Sequence derived from alignment at H-fluviatilis_contig100032:30..858+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100032:30..858+ >mRNA_H-fluviatilis_contig100032.69.1 ID=mRNA_H-fluviatilis_contig100032.69.1|Name=mRNA_H-fluviatilis_contig100032.69.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=876bp|location=Sequence derived from alignment at H-fluviatilis_contig100032:30..858+ (Heribaudiella fluviatilis SAG_13_90)back to top |