mRNA_H-canaliculatus_M_contigs9953.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9953.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9953.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW0_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 7.310e-165
Identity = 235/285 (82.46%), Postives = 247/285 (86.67%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQPRFCVGICVIVERRLRARSAPLCLSLVLVMSNRRGLVAFFVSVRSALDTSNFEAVSEEDKVLAYTGPQKLFEGF 855
            SYIYERHTPI KTGLGGF L+VASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKD T+QTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCG+TPFTDPRQAEIFK+AIRSERFL+FP GFPATAQDLIRRLLTPNATYRLGNLSGGIQDIM HPMFNEV F+WRELY KRM+PPHKPK      + +    +R LR    P    L L +   RG    F  VR+ALDTSNFEAVSEEDKVLAYTGPQKLFEGF
Sbjct:  168 SYIYERHTPITKTGLGGFSLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDTTLQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVDFNWRELYAKRMVPPHKPKNPASSTLTVKARHQRFLRPVLEPCFRRLTLTVRTFRG----FPEVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 448          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB9_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 1.880e-152
Identity = 229/285 (80.35%), Postives = 234/285 (82.11%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQPRFCVGICVIVERRLRARSAPLCLSLVLVMSNRRGLVAFFVSVRSALDTSNFEAVSEEDKVLAYTGPQKLFEGF 855
            SYIYERHTPI KTGLGGF L+VASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCG+TPFTDPRQAEIFK+AIRSERFL+FP GFPATAQDLIRRLLTPNATYRLGNLSGGIQDIM HPMFNEV FDWRELY KRM PPHKPKV                                            R+ALDTSNFEAVSEEDKVLAYTGPQKLFEGF
Sbjct:  735 SYIYERHTPITKTGLGGFSLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKV--------------------------------------------RTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 975          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z1_9STRA)

HSP 1 Score: 335 bits (858), Expect = 5.650e-107
Identity = 165/287 (57.49%), Postives = 206/287 (71.78%), Query Frame = 1
Query:    1 SYIYER--HTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQPRFCVGICVIVERRLRARSAPLCLSLVLVMSNRRGLVAFFVSVRSALDTSNFEAVSEEDKVLAYTGPQKLFEGF 855
            SYIYE+     IP T +GGF  + A F+ G VVL LQYLH+MSVAYRDLKPENLL+ QDGY+K+IDFGFAKRIPFKK  T+QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL G+TPFTDPRQAEIFK+AIRS+RFLSFP GF   A+DL+R+LLTP+  +RLGNL+ G++DI+ HP F + +F+W +L++K+M PP++P                                            +V +A DTS+F  ++++ +V+ YTGPQKLFEGF
Sbjct:  466 SYIYEKAKFKLIPHTNMGGFQAHTARFYGGSVVLCLQYLHKMSVAYRDLKPENLLVAQDGYIKMIDFGFAKRIPFKKGATLQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLVGRTPFTDPRQAEIFKKAIRSDRFLSFPIGFDRDAEDLVRKLLTPSPAFRLGNLNNGVRDILEHPWFTKNNFNWDDLFNKKMEPPYRP--------------------------------------------AVSNAQDTSHFATINDDVRVIPYTGPQKLFEGF 708          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV03_9STRA)

HSP 1 Score: 313 bits (801), Expect = 5.690e-98
Identity = 152/212 (71.70%), Postives = 176/212 (83.02%), Query Frame = 1
Query:    1 SYIYER--HTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKV 630
            SYIYER     IP T LGGF    A F+ G VVL LQYLH+M+VAYRDLKPENLL+ QDGYLK+IDFGFAKRIPFKK  T+QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL G+TPFTDPRQAEIFK+AIRS+RFL+FP GF   A+DLIR+LLTP+ T+RLGNL+GG++DIM HP F+   F +  LY+K+M  P+ P V
Sbjct:  518 SYIYERAKFKLIPHTNLGGFQPATARFYGGSVVLCLQYLHKMNVAYRDLKPENLLVAQDGYLKMIDFGFAKRIPFKKGATMQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLLGRTPFTDPRQAEIFKKAIRSDRFLAFPIGFDPQAEDLIRKLLTPSPTFRLGNLNGGVKDIMDHPWFSSNGFAFDNLYNKKMATPYTPAV 729          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNP9_HETAK)

HSP 1 Score: 266 bits (680), Expect = 1.820e-84
Identity = 123/210 (58.57%), Postives = 159/210 (75.71%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKV 630
            SYIY+R   IP T +GGF ++ A F+  CVVL L+Y+H + VAYRDLKPENLLL   G+LK+IDFGFAK IPFKK N +QTKSFTLCGTPDYLAPELV S+GHDK+VDYWALGC +YEL+CG+TPF D  Q E+FK+ + S++ L  P+GF + A DL+++LL PN ++RLGNL+GG +DIM H  F+  + DW  +  K +  P+ P +
Sbjct:  118 SYIYDRVHLIPHTSVGGFRVSTARFYAACVVLCLEYVHGLGVAYRDLKPENLLLDNQGFLKMIDFGFAKYIPFKKGNQIQTKSFTLCGTPDYLAPELVRSKGHDKSVDYWALGCLVYELICGQTPFQDNYQPEVFKKIVNSKKSLHIPRGFDSDAADLVKKLLAPNPSFRLGNLNGGARDIMNHAWFDGKT-DWDGILGKTVQAPYVPSI 326          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPB2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.910e-82
Identity = 122/212 (57.55%), Postives = 154/212 (72.64%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEV-SFDWRELYHKRMIPPHKPKVQ 633
            +YIYE+   I +T LGGF  + A F+ GCV+   QY+H   VAYRDLKPENLL+   G+ K+IDFGFAKRIPF KD  V  KSFT+CGTP+YL+PEL+ S GHDK+VDYWALGC +YELL G+TPF D  Q EIF++   S++ L+FP+G   +A DLIRRLLTPN  +RLGNLSG + DIM H  F E  SF W +L  K++ PP+ P ++
Sbjct:  122 TYIYEKVNLIRRTALGGFVESAAMFYAGCVISAFQYVHDKGVAYRDLKPENLLIDSAGFCKIIDFGFAKRIPFMKDGKVCAKSFTICGTPEYLSPELIQSSGHDKSVDYWALGCLVYELLVGQTPFQDDNQREIFRKITNSKKHLAFPKGMNPSAVDLIRRLLTPNPAFRLGNLSGAVDDIMNHAWFGESESFAWEKLNMKQLTPPYVPIIR 333          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9B3_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.600e-78
Identity = 113/211 (53.55%), Postives = 145/211 (68.72%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQ 633
            +YIYE+   IP++ LGGF   V+ F+C CVV    ++H + VAYRDLKPENLL+   GY+KVIDFGFAK IPF+K   +  KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC LYELL G TPF +    E+FKR ++S ++L FP       QDLI +LLT N   RLGNL  G  D+  HP F +V+F+W  L  +    P+ P ++
Sbjct:   43 TYIYEKTDVIPRSSLGGFVEPVSQFYCSCVVSAFSHIHGLGVAYRDLKPENLLMDATGYIKVIDFGFAKHIPFEKRGKIHHKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLLYELLVGHTPFANDNHQEVFKRILQSTKYLRFPSRMGKKVQDLIHKLLTTNPIMRLGNLEKGTDDVKEHPWFKDVNFEWERLERRGYKAPYVPVIK 253          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAC3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 2.930e-77
Identity = 120/211 (56.87%), Postives = 149/211 (70.62%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQ 633
            +Y+YE+   +P+T LGGF +  A F+ GCV+    Y+H   VAYRDLKPENLL+  +G+LKVIDFGFAKRIPF K+     KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC +YELL G TPF    Q EIFKR I+S R+L FP+     A DL+ +LLT N  YRLGNL G +QDIM H  F +  FDW  L  K+ + P  PK++
Sbjct:  575 TYVYEKTHVLPRTKLGGFSVPHAQFYSGCVISAFNYIHGKGVAYRDLKPENLLVTAEGFLKVIDFGFAKRIPFVKNGRTSAKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLVYELLIGHTPFQHDSQQEIFKRIIQSSRYLHFPKNMDTGAVDLVTKLLTVNPAYRLGNLQGRVQDIMNHQWFKKTKFDWAALDAKQQVAPFVPKIK 785          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4B2_9STRA)

HSP 1 Score: 245 bits (626), Expect = 8.720e-74
Identity = 113/210 (53.81%), Postives = 144/210 (68.57%), Query Frame = 1
Query:    4 YIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQ 633
            YIY+R   +P+T  GGF      F+  C +  L Y+H+  VAYRDLKPENLLL   GYLK+IDFGFAK +PF+K+  +Q K+FTLCGTP+YLAPELVLSRGHDK+VDYWA GC +YEL+ G+TPF D +  EIFK+ I S   L+FP+G      DLI+ L+ PN   RLGNL GG ++IM HP F+    DW +L  K +  P  P ++
Sbjct:  344 YIYDRFDSLPRTNFGGFLKGHTQFYAACALSALDYIHKKDVAYRDLKPENLLLDSQGYLKIIDFGFAKTVPFQKNGNLQLKTFTLCGTPEYLAPELVLSRGHDKSVDYWAFGCLVYELMVGRTPFQDEQHDEIFKKIIHSSTNLTFPRGLDNDCIDLIKGLMNPNPAVRLGNLLGGPKEIMEHPFFS--GLDWSQLRRKTISAPFHPSIR 551          
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Match: cGMP-dependent (protein kinase (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S3Z2_PLAVT)

HSP 1 Score: 230 bits (586), Expect = 3.850e-69
Identity = 105/217 (48.39%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    1 SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHKRMIPPHKPKVQPRFCVG 651
            S +YE+   + K   G F ++ A F+   VV  L+YL +M+VAYRDLKPENL++   GYLK++DFGFAK +P+ ++  +  +SFTLCGTP+YLAPELVLS GH KAVD+WALGC LYEL+ G+TPF    Q +IF++ ++    L FP  F   A+DLI +LL  N   R+G+L+GG+QD++ HP F    FDW  + +K M  P+ P ++  F  G
Sbjct:  217 SLLYEKAFKVAKGTCGAFEISAARFYTANVVEALRYLQKMTVAYRDLKPENLVIDSAGYLKMVDFGFAKHMPYLRNGALYERSFTLCGTPEYLAPELVLSEGHGKAVDHWALGCLLYELIAGRTPFQHNDQNKIFEKILQGRNMLKFPPKFDPDAKDLILKLLETNPALRIGSLAGGMQDVVNHPFFTNTKFDWAAMINKTMKAPYVPAIKDAFDAG 433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9953.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
cGMP-dependent7.310e-16582.46protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
cGMP-dependent1.880e-15280.35protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
cGMP-dependent5.650e-10757.49protein kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
cGMP-dependent5.690e-9871.70protein kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
Hypothetical1.820e-8458.57protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical2.910e-8257.55protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.600e-7853.55protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
cGMP-dependent2.930e-7756.87protein kinase n=2 Tax=Rhizochromulina marina TaxI... [more]
cGMP-dependent8.720e-7453.81protein kinase n=1 Tax=Nannochloropsis salina CCMP... [more]
cGMP-dependent3.850e-6948.39protein kinase (Fragment) n=1 Tax=Plasmopara vitic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9953contigH-canaliculatus_M_contigs9953:187..2937 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LTW0
PFAMsPkinase,WD40,cNMP_binding
Model size858
Max annot lvl2759|Eukaryota
KEGG koko:K07376,ko:K19477
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04713,ko04714,ko04730,ko04740,ko04923,ko04924,ko04970,map04022,map04270,map04540,map04611,map04713,map04714,map04730,map04740,map04923,map04924,map04970
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.2e-165
EggNOG OGsCOG0664@1|root,KOG0614@2759|Eukaryota
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-12_004110.1
EC2.7.11.12
DescriptioncGMP-dependent protein kinase activity
Cds size858
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854236.1977537-CDS-H-canaliculatus_M_contigs9953:186..3691696854236.1977537-CDS-H-canaliculatus_M_contigs9953:186..369Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9953 187..369 +
1696854236.211516-CDS-H-canaliculatus_M_contigs9953:1210..14761696854236.211516-CDS-H-canaliculatus_M_contigs9953:1210..1476Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9953 1211..1476 +
1696854236.2245338-CDS-H-canaliculatus_M_contigs9953:1685..18961696854236.2245338-CDS-H-canaliculatus_M_contigs9953:1685..1896Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9953 1686..1896 +
1696854236.2359934-CDS-H-canaliculatus_M_contigs9953:2359..24581696854236.2359934-CDS-H-canaliculatus_M_contigs9953:2359..2458Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9953 2360..2458 +
1696854236.2507668-CDS-H-canaliculatus_M_contigs9953:2838..29371696854236.2507668-CDS-H-canaliculatus_M_contigs9953:2838..2937Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9953 2839..2937 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9953.1.1prot_H-canaliculatus_M_contigs9953.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9953 187..2937 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9953.1.1

>prot_H-canaliculatus_M_contigs9953.1.1 ID=prot_H-canaliculatus_M_contigs9953.1.1|Name=mRNA_H-canaliculatus_M_contigs9953.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=286bp
SYIYERHTPIPKTGLGGFPLNVASFFCGCVVLPLQYLHQMSVAYRDLKPE
NLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLS
RGHDKAVDYWALGCFLYELLCGKTPFTDPRQAEIFKRAIRSERFLSFPQG
FPATAQDLIRRLLTPNATYRLGNLSGGIQDIMLHPMFNEVSFDWRELYHK
RMIPPHKPKVQPRFCVGICVIVERRLRARSAPLCLSLVLVMSNRRGLVAF
FVSVRSALDTSNFEAVSEEDKVLAYTGPQKLFEGF*
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mRNA from alignment at H-canaliculatus_M_contigs9953:187..2937+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9953.1.1 ID=mRNA_H-canaliculatus_M_contigs9953.1.1|Name=mRNA_H-canaliculatus_M_contigs9953.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2751bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9953:187..2937+ (Hapterophycus canaliculatus Oshoro7m male)
TCGTACATCTACGAGAGGCACACGCCCATCCCCAAGACCGGGCTGGGGGG TTTCCCGCTCAACGTGGCGTCGTTCTTCTGCGGGTGCGTGGTCCTCCCTT TGCAGTACCTGCACCAGATGTCCGTGGCCTACCGCGACCTCAAGCCGGAG AACCTGTTGCTCGGCCAGGACGGTTACCTCAAGGTGTGTTGTCTCTCCTC CGCCGCTTGTCGGGGCTCGGGGCACCCACCCTCGCGTTTGCCTCGCGCAG AGTTGAGAGATCAGCCCGCTGACCGAGATACCGAACACGCGTGTCGATTT TTGTCCATCTTTGTTGTTTTCTCTCCTTTTTTCTGGTTTCTTTTTCGTCG CGATGGACCAAAACGCAAGGCCCCGTCTCGCGCCGGGCGTTTTATTTTTT TTATTTTGCGAGGGTCGGGCGCGTTTTTGTGCGTGTGTGCACGAACGCCC GGGCCGCCGCGCCGACCGTGGCGTGCGTGCCTTTTCCCGATCGAAGCAGA AGCGAACCACCACCCTCGCGAACGAAAATCGATCCACGAAAGCAAAGGCC CTTCCGCCGCCCTCGTTCGGGACGGCACAAGCCGCCGTTCTGTTTCAGGA CAGGAGCCATCTCGGTCGAGAAGAGGGCCGCACATCACCACGGGCTGCTG TTTCCTCCTGCCGTTGTGCGCGAGGAGGCACGGCGTGTTGAAGTAGGCGT TTAAGAGAACCCAAACGGAGCAGAGGGCCCCCAGCGGGCGTACGCTTGTC ATTTTATCTCGTCTTTCCAATCTGCGATCGCTCTGGACTTTGCGAAAGAG GAGAGTGTCGACGAGACGCTTAGAAATCGCCGCCGAAAATTAGTGTGTTG GGCGTGTGTCGGGCTCCTCGCAACCAAGTGTCGTGACGCTCTTTTCATCC GATGTCCCGAGCTGGAACTCGCCCGTCACACTGCTGCTCGATCCCATGCA CTGACAAAGGACACCTGCGCCACGCACGCGGTCTCTCGACACCTTTTGGG CGTCGCGTGACCCGAATAAAAAAGGTGATTGACTTCGGATTCGCGAAGCG CATCCCCTTCAAGAAGGACAACACCGTGCAGACCAAGTCCTTCACGCTCT GCGGCACCCCTGACTACCTCGCACCAGAGCTGGTGCTGTCCCGCGGCCAC GACAAGGCCGTGGACTACTGGGCCCTCGGGTGCTTCCTGTACGAGCTGCT CTGCGGGAAGACCCCCTTCACGGACCCCCGCCAGGCCGAGATCTTCAAGA GGGCCATTCGCAGCGAGCGCTTCTTGAGCTTCCCACAAGGGTGAGAAGGA GTTGGTCACCGTCTTGCGTGTCGTTGGAAATCGGGGTGGCGATTGGCACC CATGGTGGTGGTGGTGGTCGTGGCTTTCGTTGTCTGCGTTTAGACGTCGG AGCCCAGGTTGGTCCTCCTTCCCCGTCTCACAGTGCCTACTCTGCGCCCT CCAACATGACAACAAATCCACGACCGACAACTACGATGATTTCAATCAGG TTCCCAGCCACAGCCCAGGACCTGATCCGACGTCTCCTGACACCCAATGC CACGTACCGGCTGGGAAACCTGAGCGGAGGCATCCAAGACATCATGTTGC ACCCCATGTTCAACGAAGTCAGCTTCGACTGGCGAGAGCTGTATCACAAG CGGATGATCCCGCCGCACAAGCCGAAGGTGCAGCCGCGTTTTTGTGTTGG TATTTGTGTCGTGTGTGGGCGCGCGCGTTGTAGCAGCGTTTTTGGCGGTG TGTTTCTGTTTCCTCATTGCAGCCCGGCGTACTGCTCAAGAAGCCCGCCA GCTACAGTGAGGGTGTCAGATCTGGGCAAAAAGATGTGTTTTTTGTGCGA CGGTGACAGCAGAGAGTCGCACCGCAGCTTCTCAAGGTATGCCTCGATAT GCCTCGAAAGCCCAACACAGTACAGTAGTGGGAATACAATCGTAGCGAAA ACTAAAAACATTGCCTACGATGATGCAACACGATGAGACGCGAAATGGCT TGAAGCGATGCGGTGTGAAGTGGGCGATCGACGCTTTTCTCTTCCCTCTT TCGTGGGGTGGACCTTCGGTGCGCGCGCGCACTCGCGGCTCCGTGCAGTG CCGCTTGCTCGAACGCTCACTAGCCCTCAAGAGCTGGATATTTCCTGGTT GTCGCTTGTCTTCGTTGTTGCAGATCGTTGAGCGCCGACTGCGCGCAAGA TCGGCACCCCTCTGTCTTTCTCTGGTGTTGGTGATGAGCAACAGGCGTGG CTTGGTCGCCTTCTTTGTGTCCGTGCATCTCGTTCGATCTTTCGCTCTGT CCAGCGAGCGATCAATGTCACAAAAAGCTCCGCGCATTACTTGATCGCTG AAGTCTCAAACCGCAACGTTGACCGAAAAGCTACGACCCTTTTTTTTTTT TTTTCGCTGCTTTCGTTAGTTGTCCCTCTCGCCTCCGCCTTCCGAGCCGC CGGGCCTCAACCTGGCACACGTACACCGCGAAGCCAATTCAGAACCGATG GCGCTACCGGCCCGCTCGTTCCCCCTACTGGATCTGCTTGCCCGTCCGCC TGATGGTACTTGATTCGCCTGCACCCGCACGTGTGTGTAATTGACCCGCA TGTACTGACGCCCGTCTTGCCTTTGTTCCTCGGTTTGTCTCGGGGTGGGC AGGTCCGGAGCGCCCTCGACACGTCCAACTTCGAGGCCGTGAGCGAGGAG GACAAGGTGTTGGCCTACACCGGCCCGCAGAAGCTCTTCGAAGGCTTCTA G
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9953:187..2937+

>mRNA_H-canaliculatus_M_contigs9953.1.1 ID=mRNA_H-canaliculatus_M_contigs9953.1.1|Name=mRNA_H-canaliculatus_M_contigs9953.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=858bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9953:187..2937+ (Hapterophycus canaliculatus Oshoro7m male)
TCGTACATCTACGAGAGGCACACGCCCATCCCCAAGACCGGGCTGGGGGG
TTTCCCGCTCAACGTGGCGTCGTTCTTCTGCGGGTGCGTGGTCCTCCCTT
TGCAGTACCTGCACCAGATGTCCGTGGCCTACCGCGACCTCAAGCCGGAG
AACCTGTTGCTCGGCCAGGACGGTTACCTCAAGGTGATTGACTTCGGATT
CGCGAAGCGCATCCCCTTCAAGAAGGACAACACCGTGCAGACCAAGTCCT
TCACGCTCTGCGGCACCCCTGACTACCTCGCACCAGAGCTGGTGCTGTCC
CGCGGCCACGACAAGGCCGTGGACTACTGGGCCCTCGGGTGCTTCCTGTA
CGAGCTGCTCTGCGGGAAGACCCCCTTCACGGACCCCCGCCAGGCCGAGA
TCTTCAAGAGGGCCATTCGCAGCGAGCGCTTCTTGAGCTTCCCACAAGGG
TTCCCAGCCACAGCCCAGGACCTGATCCGACGTCTCCTGACACCCAATGC
CACGTACCGGCTGGGAAACCTGAGCGGAGGCATCCAAGACATCATGTTGC
ACCCCATGTTCAACGAAGTCAGCTTCGACTGGCGAGAGCTGTATCACAAG
CGGATGATCCCGCCGCACAAGCCGAAGGTGCAGCCGCGTTTTTGTGTTGG
TATTTGTGTCATCGTTGAGCGCCGACTGCGCGCAAGATCGGCACCCCTCT
GTCTTTCTCTGGTGTTGGTGATGAGCAACAGGCGTGGCTTGGTCGCCTTC
TTTGTGTCCGTCCGGAGCGCCCTCGACACGTCCAACTTCGAGGCCGTGAG
CGAGGAGGACAAGGTGTTGGCCTACACCGGCCCGCAGAAGCTCTTCGAAG
GCTTCTAG
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