mRNA_H-canaliculatus_M_contigs9570.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9570.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9570.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: ABC (multidrug transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP7_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.460e-103
Identity = 172/251 (68.53%), Postives = 191/251 (76.10%), Query Frame = 1
Query:  367 MRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMYPYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAG---DGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAPR 1110
            M YRR L+PSL GV+LTV AGEKVGIVGRTGSGKTSLLRA+FG+YPY G I IDGVD+STLP+H+LRSRLA IPQ+PLLF GT+R+NLDPSGEH D ALW AL SSRLA    D D+GG                      G G        GGF L+  LDGYGANMS+GQRQLLCIARALLR+SKIVCVDEAT+RMD  TAKLVDAAM EAFRDATVLTVAHRLP VL SCD+V VMSEG ++E+G PR
Sbjct:    1 MSYRRDLTPSLMGVNLTVGAGEKVGIVGRTGSGKTSLLRAIFGLYPYSGCIDIDGVDISTLPVHLLRSRLAVIPQDPLLFAGTVRENLDPSGEHPDTALWQALRSSRLADVDLDRDSGGGSDGAIGAGWGDPSTTKADSTVGSGGAVARGSVGGFRLDTELDGYGANMSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGKPR 251          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHF0_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.310e-92
Identity = 156/231 (67.53%), Postives = 173/231 (74.89%), Query Frame = 1
Query:  427 GEKVGIVGRTGSGKTSLLRAVFGMYPYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAG---DGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAPR 1110
            G KVGIVGRTGSGKTSLLRA+FG+YPY G I IDGVD+STLP+H+LRSRLA IPQ+PLLF GT+R+NLDPSGEH D ALW AL SSRLA    D D+ G                      G G       GGGF L+  LDGYG NMS+GQRQLLCIARALLR+SKIVCVDEAT+RMD  TAKLVDAAM EAFRDATVLTVAHRLP VL SCD+V VMSEG ++E+G PR
Sbjct:   12 GPKVGIVGRTGSGKTSLLRAIFGLYPYSGCIDIDGVDISTLPVHLLRSRLAVIPQDPLLFAGTVRENLDPSGEHPDTALWQALRSSRLADGDLDRDSAGGGDDSVGAGWGDSSATKTDSTIGSGGAVARGSGGGFRLDTELDGYGVNMSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPR 242          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0GLD2_9COLE)

HSP 1 Score: 195 bits (495), Expect = 5.350e-56
Identity = 131/370 (35.41%), Postives = 182/370 (49.19%), Query Frame = 1
Query:    1 VVGNLTGLLGALTETEREMISVERMDEYCREAGHMPRSGGHTGVAAGRSDGRFAANDANDSDCDENNNGTTAINKSDLVGGRDHRTNNAARISRMHLTTREGAGVVSSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMYP-YGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            + G L+G++ A TETEREMI+VER+ +Y  E             A    D  +A                                                       WP +G +  +++V++YR  L+P+L GVS   R  EK+GIVGRTG+GK+SL+ A+F +   Y G I ID  D+S + IH LRSRL+ IPQEP LF GTIR+NLDP  E  D  +W AL    LA                                 V R       GL++S+   G N+S GQ+QL C+ARA+L  +KI+C+DEAT+ +D  T +L+   +   FR +TV+T+AHR+  VL  CDRV+VM +G ++E G P
Sbjct:   33 MTGLLSGVVNAFTETEREMIAVERVSQYIEEV--------EPETATYIMDPPYA-------------------------------------------------------WPCQGVVSFNNVVLKYRNHLAPALKGVSFETRPAEKIGIVGRTGAGKSSLIVALFRLVELYSGSITIDSADISRMSIHALRSRLSCIPQEPFLFSGTIRENLDPLKEFRDQEIWSALTRVDLAP-------------------------------TVRRLG-----GLDFSILSGGLNLSVGQKQLFCLARAVLHNTKILCIDEATANVDQETDRLIQTTLRTVFRKSTVITIAHRIQTVL-DCDRVLVMGDGQVLEFGIP 302          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: ATP (binding cassette subfamily C member 10 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XU63_SERLL)

HSP 1 Score: 191 bits (486), Expect = 3.850e-55
Identity = 116/263 (44.11%), Postives = 153/263 (58.17%), Query Frame = 1
Query:  322 SDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMYPYG-GQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            + WP +G LE   +V+ YR GL  +L GVSL VR GEKVGIVGRTGSGK++L  A+F M     GQI +DG+D+ST+ +  LRSRLA IPQ+P LF GTIR+NLDP   H D  L D L    L+                                +V+R       GL+  +   G   S GQRQLLC+ARALL ++K++C+DEAT+ +D  T KL+   + E F+D TVLT+AHR+  ++  CDRV+VM  G + E   P
Sbjct:   29 ASWPEQGWLEFRGVVLAYRDGLPNALDGVSLVVRPGEKVGIVGRTGSGKSTLFLALFRMVELNQGQILLDGLDISTVGLGQLRSRLAIIPQDPFLFSGTIRENLDPCSRHPDQQLLDVLDQCHLSA-------------------------------VVNRMG-----GLDAEVGERGKFFSVGQRQLLCLARALLTRAKVLCIDEATASVDQKTDKLLQQTIRETFQDKTVLTIAHRINTIM-DCDRVLVMQGGKVAEFDTP 254          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: Putative (ABC transporter C family member 10 (Fragment) n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6Z8U4_DAVIN)

HSP 1 Score: 191 bits (485), Expect = 6.650e-55
Identity = 108/262 (41.22%), Postives = 155/262 (59.16%), Query Frame = 1
Query:  325 DWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMY-PYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            +WP+ G++E+ DL ++YR      L G+S T   G K+GIVGRTGSGKT+L+ A+F +  P GG+I +DG+D+ST+ +H LRSR   IPQ+P LF GT+R NLDP  +HTD  +W+ LG  +L                               E +  +E      GL+ S+   G+N S GQRQL C+ RALLR+SKI+ +DEAT+ +D AT  ++   +   F D TV+TVAHR+P V+  C  V+ +S+G ++E   P
Sbjct:   35 NWPAVGKVEIQDLQIKYRHEAPLVLRGISCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGKIVVDGIDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHTDQEIWEVLGKCQLR------------------------------EAVQEKEE-----GLDSSVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQRTIRTEFADCTVITVAHRIPTVM-DCTMVLAISDGKLVEYDEP 260          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: multidrug (resistance-associated protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E91AF)

HSP 1 Score: 189 bits (481), Expect = 1.300e-54
Identity = 112/280 (40.00%), Postives = 163/280 (58.21%), Query Frame = 1
Query:  274 ISRMHLTTREGAGVVSSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMY-PYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAPR 1110
            ++ M  + +E    VS DWP EG L + D    YR  L+P L  ++L V  GEK+GIVGRTG+GK+S++ ++F +  P  G I I+ +D++ + +  LRS+L  IPQ+P++F GT+R NLDP  EH D +LW AL  S L                               +  V     G    LEY L   G+N+SAGQRQLLC+ARALLR+++I+ +DEAT+ +D  T + V   + E F   T++T+AHRL  V+  CDR++V+S G I+E+G P+
Sbjct:    1 MTAMVGSWQESTIPVSEDWPEEGTLSLCDFSTAYRTSLNPVLCNINLDVGNGEKIGIVGRTGAGKSSIILSIFRIIEPINGCILINNLDINHIGLQKLRSKLTVIPQDPVIFGGTLRMNLDPWDEHDDDSLWSALEHSHL-------------------------------KNFVSSLPHG----LEYELTEGGSNISAGQRQLLCLARALLRRTRILFLDEATASVDLETDQFVHNTIREVFSHCTIITIAHRLHTVI-ECDRIIVLSNGCIVEDGPPQ 244          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Fusarium sp. NRRL 66182 TaxID=2692428 RepID=A0A8H4XQV9_9HYPO)

HSP 1 Score: 191 bits (485), Expect = 1.600e-54
Identity = 114/267 (42.70%), Postives = 156/267 (58.43%), Query Frame = 1
Query:  310 GVVSSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMYPY-GGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            G V  +WP+EGR+  S+  MRYR GL   LTG+++ +R GE++GIVGRTG+GK+S++ A+F +    GG I IDG D+  + +  LRSRLA IPQ+P LF+GT+R NLDP  EH D  LWDAL  S L G+   G                        +      TR     L+ ++D  G N S GQRQL+ +ARAL+R S+I+  DEATS +D  T + +   M   F+  T+L +AHRL  ++T  DR+ VM +G I E  AP
Sbjct:   38 GEVEPEWPTEGRITFSNAQMRYRAGLPLVLTGLNMDIRGGERIGIVGRTGAGKSSIMSALFRITELSGGSITIDGKDIGKVGLQDLRSRLAIIPQDPTLFRGTVRSNLDPFNEHNDLELWDALRKSHLIGELPEGSELEESDEEKTQ------------QAQTQSSTR---IQLDSTVDEEGLNFSLGQRQLMALARALVRDSRIIICDEATSSVDFETDRKIQRTMATGFKGKTLLCIAHRLRTIITY-DRICVMDQGRIAELDAP 288          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2F8S3_9ROSI)

HSP 1 Score: 194 bits (492), Expect = 1.940e-54
Identity = 109/264 (41.29%), Postives = 157/264 (59.47%), Query Frame = 1
Query:  322 SDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMY-PYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAPR 1110
            SDWP+ G++++ DL +RYR G    L G+S T   G K+GIVGRTGSGKT+L+ A+F +  P GG+I +DG+D+S + +H LRSRL  IPQ+P LF GT+R NLDP  +HTD  +W+ LG  +L                               E +  +E      GL+  +   G+N S GQRQL C+ RALLR+S+++ +DEAT+ +D AT  ++   +   F D TV+TVAHR+P V+  C  V+ +S+G ++E   PR
Sbjct:  165 SDWPAVGKVDICDLQIRYRPGTPLVLRGISCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPTGGKIIVDGIDISKIGLHDLRSRLGIIPQDPTLFNGTVRYNLDPLSKHTDQEIWEVLGKCQLQ------------------------------EAVQEKEQ-----GLDSLVVEDGSNWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTLRTEFSDCTVITVAHRIPTVM-DCSMVLAISDGKLVEYDEPR 392          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: multidrug (resistance-associated protein 1-like isoform X1 n=2 Tax=Nomia melanderi TaxID=2448451 RepID=UPI0013047B1B)

HSP 1 Score: 196 bits (498), Expect = 1.990e-54
Identity = 114/265 (43.02%), Postives = 158/265 (59.62%), Query Frame = 1
Query:  316 VSSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMYPY-GGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            +S +WP +GR+E  D  +RYR GL   L G+S +V  GEKVGIVGRTG+GK+SL  A+F +    GGQI ID +D++ L +H LRSRL  IPQ+P+LF GT+R NLDP  +H+D  +W AL  + L    +N                          G++H  T G            G N+S GQRQL+C+ARALLRK+K++ +DEAT+ +D  T  L+   +   F+D TVLT+AHR   +L S DRV+V+  G+I+E  +P
Sbjct:  262 LSKEWPIQGRVEFKDYKVRYREGLDLVLRGLSFSVNGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGQISIDDIDIAKLGLHDLRSRLTIIPQDPILFSGTLRMNLDPFNQHSDDEVWRALEHAHLKSFVEN-----------------------LASGLLHEVTEG------------GENLSIGQRQLICLARALLRKTKVLILDEATASVDLETDDLIQTTIRREFKDCTVLTIAHRFNTILDS-DRVIVLDNGLIMEYDSP 490          
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q8A8_9NEOP)

HSP 1 Score: 195 bits (496), Expect = 3.980e-54
Identity = 114/264 (43.18%), Postives = 158/264 (59.85%), Query Frame = 1
Query:  319 SSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVGRTGSGKTSLLRAVFGMY-PYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPLLFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVXXXXXXXXXXXXXXXXXGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARALLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLTSCDRVVVMSEGIIIEEGAP 1107
            SS WP +G +E  D  +RYR GL   L G+S TV+ GEKVGIVGRTG+GK+SL   +F +  P GGQI IDGVD+  L +H LRSRL  IPQ+P+LF GT+R NLDP G ++D+ +W AL  + L                            A  +G+           LE+ +   G N+S GQRQL+C+ARALLRK+K++ +DEAT+ +D  T  L+   +   F+D TVLT+AHRL  ++ S +RV+V+  G+++E   P
Sbjct:  265 SSSWPEKGEVEFKDYQVRYREGLDLVLRGISFTVKGGEKVGIVGRTGAGKSSLTLGLFRIIEPAGGQILIDGVDIFKLGLHALRSRLTIIPQDPVLFSGTLRINLDPFGRYSDSDVWLALEHAHLK---------------------------AFVKGLPDA--------LEHPVSEGGENLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRSEFKDCTVLTIAHRLNTIMDS-NRVIVLDRGLLVEYDTP 492          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9570.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC1.460e-10368.53multidrug transporter n=1 Tax=Ectocarpus siliculos... [more]
ABC1.310e-9267.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.350e-5635.41protein n=1 Tax=Ignelater luminosus TaxID=2038154 ... [more]
ATP3.850e-5544.11binding cassette subfamily C member 10 n=1 Tax=Ser... [more]
Putative6.650e-5541.22ABC transporter C family member 10 (Fragment) n=2 ... [more]
multidrug1.300e-5440.00resistance-associated protein 1-like n=1 Tax=Centr... [more]
ABC1.600e-5442.70transporter domain-containing protein n=1 Tax=Fusa... [more]
Uncharacterized1.940e-5441.29protein n=1 Tax=Populus davidiana TaxID=266767 Rep... [more]
multidrug1.990e-5443.02resistance-associated protein 1-like isoform X1 n=... [more]
Uncharacterized3.980e-5443.18protein n=1 Tax=Cryptotermes secundus TaxID=105785... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9570contigH-canaliculatus_M_contigs9570:266..3685 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSP7
PFAMsABC_membrane,ABC_tran
Model size1110
Max annot lvl2759|Eukaryota
KEGG koko:K05665,ko:K05666,ko:K05668,ko:K05673
KEGG TC3.A.1.208.15,3.A.1.208.2,3.A.1.208.7,3.A.1.208.8
KEGG Pathwayko01523,ko01524,ko02010,ko04024,ko04071,ko04976,ko04977,ko05206,map01523,map01524,map02010,map04024,map04071,map04976,map04977,map05206
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.39e-104
EggNOG OGsCOG1132@1|root,KOG0054@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size1110
COG categoryV
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854215.7655401-CDS-H-canaliculatus_M_contigs9570:265..7001696854215.7655401-CDS-H-canaliculatus_M_contigs9570:265..700Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9570 266..700 +
1696854215.7859046-CDS-H-canaliculatus_M_contigs9570:1428..15841696854215.7859046-CDS-H-canaliculatus_M_contigs9570:1428..1584Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9570 1429..1584 +
1696854215.8015394-CDS-H-canaliculatus_M_contigs9570:1959..22361696854215.8015394-CDS-H-canaliculatus_M_contigs9570:1959..2236Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9570 1960..2236 +
1696854215.8147895-CDS-H-canaliculatus_M_contigs9570:3063..31431696854215.8147895-CDS-H-canaliculatus_M_contigs9570:3063..3143Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9570 3064..3143 +
1696854215.824982-CDS-H-canaliculatus_M_contigs9570:3523..36851696854215.824982-CDS-H-canaliculatus_M_contigs9570:3523..3685Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9570 3524..3685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9570.1.1prot_H-canaliculatus_M_contigs9570.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9570 266..3685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9570.1.1

>prot_H-canaliculatus_M_contigs9570.1.1 ID=prot_H-canaliculatus_M_contigs9570.1.1|Name=mRNA_H-canaliculatus_M_contigs9570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=370bp
VVGNLTGLLGALTETEREMISVERMDEYCREAGHMPRSGGHTGVAAGRSD
GRFAANDANDSDCDENNNGTTAINKSDLVGGRDHRTNNAARISRMHLTTR
EGAGVVSSDWPSEGRLEVSDLVMRYRRGLSPSLTGVSLTVRAGEKVGIVG
RTGSGKTSLLRAVFGMYPYGGQIKIDGVDVSTLPIHVLRSRLAAIPQEPL
LFQGTIRDNLDPSGEHTDAALWDALGSSRLAGDGDNGGVGGAIGAGGAGS
FAAAAAGGACGEGIVHRETRGGGFGLEYSLDGYGANMSAGQRQLLCIARA
LLRKSKIVCVDEATSRMDAATAKLVDAAMLEAFRDATVLTVAHRLPAVLT
SCDRVVVMSEGIIIEEGAPR
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mRNA from alignment at H-canaliculatus_M_contigs9570:266..3685+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9570.1.1 ID=mRNA_H-canaliculatus_M_contigs9570.1.1|Name=mRNA_H-canaliculatus_M_contigs9570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3420bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9570:266..3685+ (Hapterophycus canaliculatus Oshoro7m male)
GTGGTAGGCAACTTGACGGGACTGTTAGGTGCCCTGACCGAGACGGAGAG GGAGATGATCTCCGTCGAGCGCATGGACGAGTATTGCCGCGAAGCCGGTC ACATGCCGAGGTCGGGCGGCCACACGGGCGTCGCCGCCGGTAGGAGCGAC GGCCGCTTCGCCGCCAACGATGCCAACGACAGCGACTGCGACGAGAACAA CAATGGTACCACCGCCATCAACAAAAGCGACCTCGTGGGTGGACGAGATC ACCGCACAAACAACGCCGCCCGAATTTCGCGGATGCATCTGACGACCAGA GAGGGGGCGGGCGTGGTTTCGTCAGATTGGCCTTCGGAGGGACGGCTGGA GGTGTCCGATTTGGTCATGCGCTACCGGCGGGGTCTCAGCCCCTCACTCA CCGGGGTCAGCCTCACGGTGCGGGCGGGGGAGAAGGTGCGAGCGATCTCG ATTACGCGACGCGGGCTTGTGGCTAGTCGTCGGTGAGGAGGGCGCCGGCC ACAAGACTGGCGGGTGGGAGCAGCAAGGAGCCTCAGCATTGTGTTTTAGT GCGGGTCTAAGCATCGTCAACCAAACGGGGCCAAAACAGAACTCGATTGT CCTTTTCCTGGATCAATCAATCGGTAGGGTTTTTGATGAAGGCAACAAGA CGATTACTTTGGCGAGCTCTTCGGTAAAGGATTATACGGTTCTTTTTTTT CTTCCATTTTCTGTGACGCGATTTTCTCTATCGTCTTTTCACCATTTAGT GCTAGTCCCCTGCACCACCGTTGCACGAGCCGGACTAGCACGAGCTACCT TTGATTTAGGTTGGATGCATCTAGTTTGCTTGTCTGGCGATGGAGAACCT CCGCTGACTTGTGCTTTGCTACGATCGTGCTTGTTTCGTCGAAATTGTTT GTCGTACGGCGGGCAATAGCCTTAAACGAAGCTTTCGCTGTTTCAAATGA TTGTGCGGTGACCCTTTGAACACATTGTGGCTCAGGGATACCGAATACTT TTCCAGGTTTTGTCCGATCTTTACGGCAAACACTGCAGCATTCCCCAACA GATGGACATGGAAGCGACGCCCCCCCGAGAGTGAGTTGTGACTTCCAAGA TATGCCCGCACCGCACACGCCTTCCGAGCAAATAACCGTGTCGTTCGTCA TGTTCTTCCTCAGGTTGGGATCGTAGGCAGGACAGGGTCAGGGAAAACAT CTCTGCTCCGAGCAGTCTTCGGAATGTATCCTTACGGTGGCCAGATCAAG ATCGACGGTGTCGATGTCTCCACCCTGCCGATACATGTACTTCGCTCGCG ACTTGCCGCCATTCCGCAGGTGACATTTAACGAACAGCTGTGCTGCGATT GTATTTGTAGCCGCGGTTGTGGCTGCGGCTGCGGCTGTGGCTGTGGTTGG TGTTACCGCTGTTGTGGCTGCTGATGATTATGTTCCCGTCGTCTTCGTTG TTGTTGTGATCGTCGTCGCTATTGGCTCCGATCGTGATTGAGTGGTCGTT TTCGACAACGGTCATTTGTGCAATTCTGCATTTACGTGCTTGTTGGGTAC CTCGTTGCCCTTGACCCGAACCCTCTAAAAGCCAAGTAAATACCACAAGA GCCAAAAGGGTAGCCTTCAACATCTAACCCAACCGAACAACCCCACCGCC ACAATCGCAACTGCAACCACTCCGGCGGCCTCCTGAAACCACAGGAACCC CTACTTTTCCAAGGGACGATCCGTGACAACCTGGACCCTTCCGGAGAGCA TACCGACGCCGCCCTCTGGGACGCTCTGGGAAGTTCAAGGCTAGCCGGTG ACGGTGACAATGGTGGTGTTGGAGGTGCAATCGGTGCCGGTGGTGCGGGC TCCTTTGCTGCTGCCGCTGCCGGCGGTGCTTGTGGTGAAGGCATTGTCCA TAGGGAAACCCGTGGTGGGGGCTTCGGGCTAGAATATTCACTGGACGGGT ACGGAGCAAATATGTCTGCAGGTGAGAGGCAACACGGCTCGAAATCACTT TTCGACTGCGATCACGGGAGGAACATTTGTTGCATGAAAGACTCTCACGT CTGAACCAACGACTGGCGGTAGCATCCTTTCTATGAACCACCTCTTGCCA TCGCCGCTGCCCAAGCCTCGAAGCAGACCACATTCGGTGCCCGCCGCCAC ACAGCCATCGTCTTGTCTCTGACAGACGCTGTAGCGAGATCGATGCAATC CGGTCCTTGATGTACATCAGATCGGAACCATCGGCGCGGCATGATGTCCT CCTTTGTATCCCCGAACATTGTGGGTGGAGTTTGGGGCAAAATCACCTCT GCAGTATTTAAAGGAGCAGAGGATACTCTCGCTGCTGAAGACAAGCGTAG TTGAAACTGCGCGTGTTCAAACTCATCGGGACTATCATGAGTTTGAGGTC TTGAACCCAAACCTTGTCCATGGTCCCCCCTATAATTTATCGATTAGCCA GGACCACTCTCCAATCTTCGACCTTGCGATGCAGTTGGACGTTGAGTCAG TATTTTTTGTACAAAAAGAAGATGCCCGCGCCGGTGTCGGCATCGATGTG GTCGGTGCTGTTGGCGGCATTTCGTGGTTTTCGTAGAGGTGCTCACGCCT CACACGCTCTGACTTTCCACCCGCACTTCGCCTGCCGTACCACTGCCGTA GAGCAACAGACGGTCTCATTCGGTCTCACCTGTAAAACCACCACCAGCGC TAGCGCGATCCACGAAGACTACAAGTATCAGTTGTTGTTTTTTTGTACAC TCTTCTTGTGCTTTTCACGTGACTCATCGCTTGTCCACGTTTCCCAAGGG CAAAGGCAACTTCTGTGTATCGCGCGCGCGCTGCTGAGGAAGTCCAAGAT AGTTTGCGTGGACGAAGCTACGTCCAGGGTGAGTACCTCCAACTCGTCTC GAGGCTTGCGAGAATACTGACTTCGAGAATCTTCACGTGAGCACGCGCCG GCTCTTGGAACGATGGAGGCCGTTGTGCTTTACGCTACAGCCTGAAGTAA AACAATGCTGTGACCATGCTCATAGATACCGTCTATCGCTGTGTGAGTGC ATGTTCGGATGCGTGTAGGCAAGAAAACATCCACGCGTGATTGAGTCGCA TTGGGGGATGTCGACCTTGTGTGCGCGGATCTCGGCTCAAAATTCGGATC TTCGCGATGGGCTCTCTTCTCTCCTTGTCCTTCGCCTCCATTCTGTCACT ATCGATAATGCCCGCCCACCTCCATACATTTTGGGAAACATTGGGGCTGC ATGTCAAGATGGATGCGGCGACGGCGAAGCTCGTCGACGCCGCTATGTTG GAGGCGTTCCGAGACGCCACCGTGCTCACCGTGGCACACCGCCTGCCGGC GGTGTTGACATCTTGCGACAGGGTGGTGGTCATGAGCGAAGGGATCATCA TCGAAGAAGGGGCGCCCAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9570:266..3685+

>mRNA_H-canaliculatus_M_contigs9570.1.1 ID=mRNA_H-canaliculatus_M_contigs9570.1.1|Name=mRNA_H-canaliculatus_M_contigs9570.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1110bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9570:266..3685+ (Hapterophycus canaliculatus Oshoro7m male)
GTGGTAGGCAACTTGACGGGACTGTTAGGTGCCCTGACCGAGACGGAGAG
GGAGATGATCTCCGTCGAGCGCATGGACGAGTATTGCCGCGAAGCCGGTC
ACATGCCGAGGTCGGGCGGCCACACGGGCGTCGCCGCCGGTAGGAGCGAC
GGCCGCTTCGCCGCCAACGATGCCAACGACAGCGACTGCGACGAGAACAA
CAATGGTACCACCGCCATCAACAAAAGCGACCTCGTGGGTGGACGAGATC
ACCGCACAAACAACGCCGCCCGAATTTCGCGGATGCATCTGACGACCAGA
GAGGGGGCGGGCGTGGTTTCGTCAGATTGGCCTTCGGAGGGACGGCTGGA
GGTGTCCGATTTGGTCATGCGCTACCGGCGGGGTCTCAGCCCCTCACTCA
CCGGGGTCAGCCTCACGGTGCGGGCGGGGGAGAAGGTTGGGATCGTAGGC
AGGACAGGGTCAGGGAAAACATCTCTGCTCCGAGCAGTCTTCGGAATGTA
TCCTTACGGTGGCCAGATCAAGATCGACGGTGTCGATGTCTCCACCCTGC
CGATACATGTACTTCGCTCGCGACTTGCCGCCATTCCGCAGGAACCCCTA
CTTTTCCAAGGGACGATCCGTGACAACCTGGACCCTTCCGGAGAGCATAC
CGACGCCGCCCTCTGGGACGCTCTGGGAAGTTCAAGGCTAGCCGGTGACG
GTGACAATGGTGGTGTTGGAGGTGCAATCGGTGCCGGTGGTGCGGGCTCC
TTTGCTGCTGCCGCTGCCGGCGGTGCTTGTGGTGAAGGCATTGTCCATAG
GGAAACCCGTGGTGGGGGCTTCGGGCTAGAATATTCACTGGACGGGTACG
GAGCAAATATGTCTGCAGGGCAAAGGCAACTTCTGTGTATCGCGCGCGCG
CTGCTGAGGAAGTCCAAGATAGTTTGCGTGGACGAAGCTACGTCCAGGAT
GGATGCGGCGACGGCGAAGCTCGTCGACGCCGCTATGTTGGAGGCGTTCC
GAGACGCCACCGTGCTCACCGTGGCACACCGCCTGCCGGCGGTGTTGACA
TCTTGCGACAGGGTGGTGGTCATGAGCGAAGGGATCATCATCGAAGAAGG
GGCGCCCAGG
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