mRNA_H-canaliculatus_M_contigs7777.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.010e-24 Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 1
Query: 49 MFISFTIHFVDGDSLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNASNMINA 246
MFISFTIHFVDG++LRTIDL C+P NVTHSGENIA ELK+I+ GL+P KC GIT DNASNMI A
Sbjct: 1 MFISFTIHFVDGETLRTIDLACRPFNVTHSGENIAKELKSILTDAGLDPKKCTGITMDNASNMIRA 66
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015I9G2_RHIIW) HSP 1 Score: 60.8 bits (146), Expect = 3.930e-9 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNASNMI 240
++D+WT + F+S TIH+VD L+ LD P+ V HSG N+AN + ++ GL K + +TTDNAS+MI
Sbjct: 46 TSDMWTASNSSSFLSLTIHYVDSSWKLKNFLLDIIPIEVRHSGYNMANAIMEVLREFGL-AEKTLALTTDNASSMI 120
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF15BBF) HSP 1 Score: 55.5 bits (132), Expect = 4.100e-7 Identity = 27/77 (35.06%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGDSLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNASNMINA 246
+TD+W+ R K +++ TIHF++ L+T H+GE+IA L+ ++ LNP + ITTDN +N++ A
Sbjct: 60 TTDMWSSRTCKPYMTVTIHFMEDWELKTARFQTSYFPQDHTGEHIAEALQDVLKTWKLNPTGLVAITTDNGANIVKA 136
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z498_PHYSP) HSP 1 Score: 52.4 bits (124), Expect = 1.330e-6 Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 4 FYGGSTDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGIT 216
+Y STDIWT R ++ FISFT+H++D + + L+ +PL H IA+ L+ GL+ M C+ T
Sbjct: 54 YYSASTDIWTARSKRGFISFTLHYLDENFKMHCWILEIKPLPGKHDAYKIADALQESCELLGLDSMSCLAHT 125
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: BED-type (domain-containing protein n=31 Tax=Oryza TaxID=4527 RepID=Q587Q6_ORYSJ) HSP 1 Score: 51.2 bits (121), Expect = 1.500e-5 Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNAS 231
++DIW+ R R+ ++S +HFVD D L+ L + ++V+H+GENIA ++ +I L K +T DNAS
Sbjct: 234 TSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLAD-KIFAVTLDNAS 305
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: HAT (family dimerisation domain containing protein, expressed n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2R271_ORYSJ) HSP 1 Score: 51.2 bits (121), Expect = 1.520e-5 Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNAS 231
++DIW+ R R+ ++S +HFVD D L+ L + ++V+H+GENIA ++ +I L K +T DNAS
Sbjct: 234 TSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLAD-KIFAVTLDNAS 305
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T8K7_AMPQE) HSP 1 Score: 50.4 bits (119), Expect = 2.040e-5 Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 1 KFYGGSTDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMG 210
K+Y +TD+WT +++I+ T+H++DG+ SL LD L H+G+NIAN + II + L ++ +G
Sbjct: 162 KYYAITTDLWTSGSCELYITLTVHYIDGEWSLELKCLDTVALFADHTGDNIANCVTDIIDIRLLEGLETLG 232
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: uncharacterized (protein LOC117173933 n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143E06FF) HSP 1 Score: 49.7 bits (117), Expect = 3.030e-5 Identity = 21/78 (26.92%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 16 STDIWTGRH-RKMFISFTIHFVDGDSLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNASNMINA 246
+T WT R+ K ++ T+H+ + S+++++L+C PLN +H+ + + +L + + + TDNA+N++ A
Sbjct: 16 NTHNWTDRNTNKSYLGLTVHYPEPSSIKSVELECFPLNESHTSDCLCTQLDNLCQEWNILRSSISSVITDNAANIVKA 93
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: BED-type (domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671XK97_SPAAU) HSP 1 Score: 49.7 bits (117), Expect = 5.000e-5 Identity = 25/78 (32.05%), Postives = 43/78 (55.13%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGDS-LRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNASNMINA 246
+TD W+ + + T HF+D DS +R + LD L H+ N++ + +I+ + + + ITTDNA+N +NA
Sbjct: 176 TTDRWSSLATESHVIVTAHFIDEDSEMRNVILDTSELQTAHTAANVSTCIDSILRQYHVERESVLAITTDNATNYVNA 253
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Match: Os07g0469700 (protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=C7J4V7_ORYSJ) HSP 1 Score: 49.3 bits (116), Expect = 7.020e-5 Identity = 26/73 (35.62%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 STDIWTGRHRKMFISFTIHFVDGD-SLRTIDLDCQPLNVTHSGENIANELKAIIVRKGLNPMKCMGITTDNAS 231
++DIW+ R ++ ++S IHF+D D ++ L + ++V+H+GENIA ++ +I L K +T DNAS
Sbjct: 220 TSDIWSSRAKEDYLSVVIHFIDDDWQMQKRVLGLRLIDVSHTGENIAERIREVIDEFNLAD-KIFAVTMDNAS 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7777.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7777.2.1 >prot_H-canaliculatus_M_contigs7777.2.1 ID=prot_H-canaliculatus_M_contigs7777.2.1|Name=mRNA_H-canaliculatus_M_contigs7777.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=82bp KFYGGSTDIWTGRHRKMFISFTIHFVDGDSLRTIDLDCQPLNVTHSGENIback to top mRNA from alignment at H-canaliculatus_M_contigs7777:3055..3300- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7777.2.1 ID=mRNA_H-canaliculatus_M_contigs7777.2.1|Name=mRNA_H-canaliculatus_M_contigs7777.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=246bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7777:3055..3300- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7777:3055..3300- >mRNA_H-canaliculatus_M_contigs7777.2.1 ID=mRNA_H-canaliculatus_M_contigs7777.2.1|Name=mRNA_H-canaliculatus_M_contigs7777.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=246bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7777:3055..3300- (Hapterophycus canaliculatus Oshoro7m male)back to top |