mRNA_H-canaliculatus_M_contigs7769.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: TMP-TENI (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 316 bits (809), Expect = 3.500e-105 Identity = 172/221 (77.83%), Postives = 190/221 (85.97%), Query Frame = 1
Query: 1 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAAS 663
PLLELITPDGCASSS S+ SSL+ NIQ+A AGGVSLVQLRDYKS AKSKA+LA R+ +A +GRALFVVNGEP+ RA+GADGVHLPERM+ LV LRG G WPR+VGCSVHSV AAVEAARLGADYVQVGTMFATQSHPGK PEGVGMLNDV+R+LQ EG VLV+GVGGIDASNCG VV AGGDGVAAIRCLCSSSDAE +AR I++ +R NSA S
Sbjct: 103 PLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGE--WPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMR--NSAGS 319
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.370e-49 Identity = 111/213 (52.11%), Postives = 141/213 (66.20%), Query Frame = 1
Query: 1 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGR-ALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRL-QAEGFGD-----VLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEA 618
P+LELITPDG A+ PS L I+ A +GGV LVQ+RD SSA+SK LA +L+ V+NG +A A GA GVHLPER++ + R A +VGCSVHSV AAV AARLGADY+QVGTMFATQ+HPGKVPEG +L ++ L QA G+ VL++GVGGI+ +NC +V++AGGDGVAAIR LC + ++ A
Sbjct: 42 PVLELITPDGSAAQ-PSTH--LAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREA-----LAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRA 246
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT) HSP 1 Score: 141 bits (355), Expect = 3.410e-38 Identity = 91/194 (46.91%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 61 SLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLR 642
SL A + RA AGGV +VQLR+ A LA L ATEGR+L VVN + A+GADG+HLPER + A R G EG RLVG SVHS+ AV AA GADY+ VG+++AT+SHPG P G+G+L +V R+ + V+ +GGI A +VV+AG GVA I + +AE AR + R LR
Sbjct: 13 SLTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLPVAAARRLLG-EG--RLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVS------LPVLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALR 197
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.310e-32 Identity = 98/226 (43.36%), Postives = 126/226 (55.75%), Query Frame = 1
Query: 7 LELITPDGCASSSPSDQSSLIANIQRAAA-GGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASAASAST 681
L +TP G A++ D+ + + + RAAA GG SLVQLRD +S AA + A +G VV E HLPER R P +GCS HSV A + AA LGADYVQ+GTMFATQ+HPGK+PEG G+ + +R L E L+IGVGG+DA+N K++EAG DGVA IR + + D E AR I R L G + S A+ +T
Sbjct: 56 LVFVTPPGWAAA---DRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE----------HLPERKWRAATE-----RPNGP--LGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALD-EREAPPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRALAGAGTRISKAAQNT 260
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 127 bits (319), Expect = 1.080e-31 Identity = 86/210 (40.95%), Postives = 121/210 (57.62%), Query Frame = 1
Query: 1 PLLELITPDGCASSSPSDQSS--LIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATE-GRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEG--------VGMLNDVKRRLQAEGFGDVL--VIGVGGIDASNCGKVVEAGGDGVAAIRCLC 591
P L LITP+G + S+++ +++ I A GGVSLVQLRD ++ + A + R+ + A+F+VNG+ + A ADGVHLPE + + + + ++GCSVHS AA+ A + ADY+ VGTMF T SHPGKVPEG + ML+ + + G + L V GVGGID NC +V++ GGDGVA I LC
Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFI--NSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLC 211
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT) HSP 1 Score: 121 bits (304), Expect = 1.830e-30 Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 82 RAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 639
RA AGGV++VQLR+ A+ LAA L +A GRAL VVN + A+GADGVHLPE + A R G RLVG SVHSV AAV A GADY+ VG ++ T+SHP G G+L+ V+R ++ V V+ +GG+ A+ + + AG GVA I + S D E AR + L
Sbjct: 33 RAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLPVAKARRLVGPA---RLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1B5W2_9CHLR) HSP 1 Score: 120 bits (302), Expect = 3.030e-30 Identity = 84/216 (38.89%), Postives = 116/216 (53.70%), Query Frame = 1
Query: 1 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGE 648
P+L L+T + P L+ + +A AGGV+LVQLRD A+ LA L T+GRAL VN + AS ADGV LPE + A R AG L+G SVHS+ A+EAA GAD VQVGT+F +Q+HP GVG++ + + A V+G+GGI N +V+E G GVA +R + +S + E + + R + E
Sbjct: 6 PILCLVTDASVLGARP-----LVEAVDKAVAGGVNLVQLRDRSLPARELLALACELRIVTQGRALLFVNDRIDVALASEADGVQLPEAGLPVAEARRIAGDR---LLIGRSVHSLQTAIEAAEQGADLVQVGTVFPSQTHPELEASGVGLVTVLASCVSAP------VVGIGGITGGNAREVIEGGASGVAVVRAILASEEPEAASATLKRVIEAE 207
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9LMX6_9CHLR) HSP 1 Score: 118 bits (296), Expect = 3.620e-29 Identity = 73/181 (40.33%), Postives = 109/181 (60.22%), Query Frame = 1
Query: 61 SLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSD 603
SL+ + +A GGV+LVQLRD A ELA L+ +G+A +VN + RA+GADGV L E + A R G EG L+G SVHS+ +A+ A GAD++ VGTM+A++SHPG+ P G G++ D+ + + + +IG+GGI N ++++AG GVA I + ++SD
Sbjct: 29 SLLERVVQAVQGGVNLVQLRDKTLPAGRLLELAVPLLEVMDGKAKLIVNDRADVARAAGADGVQLGEEGLPVAAARRSLG-EGL--LIGRSVHSLSSALTAEADGADFLLVGTMYASRSHPGEPPAGPGLMRDISEQCR------LPLIGIGGITPENADEIIQAGASGVAVITNILAASD 200
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KGQ3_9CHLR) HSP 1 Score: 117 bits (294), Expect = 4.010e-29 Identity = 78/205 (38.05%), Postives = 114/205 (55.61%), Query Frame = 1
Query: 52 DQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASA 666
D+++L+A I A +GGV LVQLR+ ELA R+ A A+ ++N + A A+GV L E + + A + G + L+G SVHS+ A++AA GAD++ VGTMFA++SHPG+ P G ++ + R FG +GGIDASN G V++AG GVA I + +S + AR I R + + AA A
Sbjct: 11 DEATLVARIADAVSGGVDLVQLREKDLPGGPLLELAQRIREAISDSAMLIINERVDVAAAIAANGVQLGEEALPTIEARKILGHD---TLIGRSVHSLEGALQAAEQGADFLLVGTMFASRSHPGEEPAGPALVRQITVRCSLPLFG------IGGIDASNAGHVMDAGASGVAVITSILASPSPKEAARQIKRAIVASSLAARA 206
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Match: Thiamine-phosphate (synthase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7PCV5_9CHLR) HSP 1 Score: 116 bits (291), Expect = 1.240e-28 Identity = 77/213 (36.15%), Postives = 116/213 (54.46%), Query Frame = 1
Query: 1 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 639
P L L+T G A Q L+ + +A AGGV LVQLRD + +LAA+L+ A +GRA +VN + A+GA GV + E + G + +G SVHS AA+ A + GAD++ VGTM+A+ SHPG+ P G G++ D+ + + +IG+GG+ N G++VEAG GVA I + ++ D + A + + L
Sbjct: 8 PCLCLVTDPGIA------QKDLVERVAQAVAGGVDLVQLRDKEMPGGQLLDLAAQLLKAIDGRAKLLVNERADVAHAAGAHGVQIGEEGLPVSAVRNIVGDHSF---IGRSVHSSSAALAAEKEGADFLVVGTMYASSSHPGEEPAGPGLMRDISGTCR------LPLIGIGGVTPENAGELVEAGASGVAVITNILAAPDPKAAAAKLKQSL 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7769.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7769.1.1 >prot_H-canaliculatus_M_contigs7769.1.1 ID=prot_H-canaliculatus_M_contigs7769.1.1|Name=mRNA_H-canaliculatus_M_contigs7769.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=235bp PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAback to top mRNA from alignment at H-canaliculatus_M_contigs7769:501..1852+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7769.1.1 ID=mRNA_H-canaliculatus_M_contigs7769.1.1|Name=mRNA_H-canaliculatus_M_contigs7769.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1352bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7769:501..1852+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7769:501..1852+ >mRNA_H-canaliculatus_M_contigs7769.1.1 ID=mRNA_H-canaliculatus_M_contigs7769.1.1|Name=mRNA_H-canaliculatus_M_contigs7769.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=705bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7769:501..1852+ (Hapterophycus canaliculatus Oshoro7m male)back to top |