prot_H-canaliculatus_M_contigs77597.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs77597.1.1
Unique Name	prot_H-canaliculatus_M_contigs77597.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	69

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A2V0P3J5_9CHLO (RuvB-like helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P3J5_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 4.280e-18
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLAVDVVGGEV 68
            +VPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L  +    EV
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEYTEAEV 147

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: S8C4E5_9LAMI (RuvB-like helicase (Fragment) n=3 Tax=Mesangiospermae TaxID=1437183 RepID=S8C4E5_9LAMI)

HSP 1 Score: 81.3 bits (199), Expect = 1.330e-17
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            +VPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L+
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELS 139

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A383VCV2_TETOB (RuvB-like helicase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VCV2_TETOB)

HSP 1 Score: 84.3 bits (207), Expect = 1.700e-17
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLAVDVVGGEVA 69
            +VPFCPMVGSEVYSSEVKKTE+LMEHFRRAIGLRIKENKEV +   T L  +    E A
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEVLMEHFRRAIGLRIKENKEVYEGEVTELTPEFTESEAA 148

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: Q5QMH0_ORYSJ (RuvB-like helicase n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q5QMH0_ORYSJ)

HSP 1 Score: 81.3 bits (199), Expect = 1.740e-17
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            +VPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L+
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELS 139

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A446R8N4_TRITD (RuvB-like helicase n=6 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446R8N4_TRITD)

HSP 1 Score: 81.3 bits (199), Expect = 1.780e-17
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            +VPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L+
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELS 139

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: D8LJM6_ECTSI (RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM6_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.330e-17
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEV 51
            +VPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEV
Sbjct:   90 KVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEV 130

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A453H680_AEGTS (RuvB-like helicase n=7 Tax=Poaceae TaxID=4479 RepID=A0A453H680_AEGTS)

HSP 1 Score: 83.6 bits (205), Expect = 2.450e-17
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0

Query:    8 ACIQVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            + +QVPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L+
Sbjct:   17 SAMQVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELS 69

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A368RD90_SETIT (RuvB-like helicase n=8 Tax=Panicoideae TaxID=147369 RepID=A0A368RD90_SETIT)

HSP 1 Score: 84.0 bits (206), Expect = 2.510e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            +VPFCPMVGSEVYSSEVKKTE+LMEHFRRAIGLRIKENKEV +   T L+
Sbjct:  136 KVPFCPMVGSEVYSSEVKKTEVLMEHFRRAIGLRIKENKEVYEGEVTELS 185

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A0D2RU41_GOSRA (RuvB-like helicase n=3 Tax=Gossypium TaxID=3633 RepID=A0A0D2RU41_GOSRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.580e-17
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0

Query:    5 FVRACIQVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            F+    QVPFCPMVGSEVYSSEVKKTE+LME+FRRAIGLRIKENKEV +   T L+
Sbjct:   24 FLLHYFQVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELS 79

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BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Match: A0A5B6UDU9_9ROSI (RuvB-like helicase n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A5B6UDU9_9ROSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.680e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   11 QVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKEVGQTCATVLA 60
            +VPFCPMVGSEVYSSEVKKTEILME+FRRAIGLRIKENKEV +   T L+
Sbjct:   93 KVPFCPMVGSEVYSSEVKKTEILMENFRRAIGLRIKENKEVYEGEVTELS 142

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs77597.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V0P3J5_9CHLO	4.280e-18	72.41	RuvB-like helicase n=1 Tax=Raphidocelis subcapitat...	[more]
S8C4E5_9LAMI	1.330e-17	80.00	RuvB-like helicase (Fragment) n=3 Tax=Mesangiosper...	[more]
A0A383VCV2_TETOB	1.700e-17	72.88	RuvB-like helicase n=2 Tax=Scenedesmaceae TaxID=30...	[more]
Q5QMH0_ORYSJ	1.740e-17	80.00	RuvB-like helicase n=1 Tax=Oryza sativa subsp. jap...	[more]
A0A446R8N4_TRITD	1.780e-17	80.00	RuvB-like helicase n=6 Tax=Triticum turgidum subsp...	[more]
D8LJM6_ECTSI	2.330e-17	97.56	RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 R...	[more]
A0A453H680_AEGTS	2.450e-17	77.36	RuvB-like helicase n=7 Tax=Poaceae TaxID=4479 RepI...	[more]
A0A368RD90_SETIT	2.510e-17	82.00	RuvB-like helicase n=8 Tax=Panicoideae TaxID=14736...	[more]
A0A0D2RU41_GOSRA	2.580e-17	75.00	RuvB-like helicase n=3 Tax=Gossypium TaxID=3633 Re...	[more]
A0A5B6UDU9_9ROSI	2.680e-17	82.00	RuvB-like helicase n=3 Tax=Pentapetalae TaxID=1437...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042487	RuvBL1/2, DNA/RNA binding domain	GENE3D	2.40.50.360		coord: 40..60 e-value: 7.3E-21 score: 76.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..39 e-value: 7.3E-21 score: 76.8
IPR010339	TIP49, P-loop domain	PFAM	PF06068	TIP49	coord: 11..53 e-value: 3.4E-16 score: 59.4
IPR037938	RuvB-like helicase 1	PANTHER	PTHR11093:SF6	RUVB-LIKE 1	coord: 11..54
IPR027238	RuvB-like	PANTHER	PTHR11093	RUVB-RELATED REPTIN AND PONTIN	coord: 11..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs77597	contig	H-canaliculatus_M_contigs77597:4..210 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs77597.1.1	mRNA_H-canaliculatus_M_contigs77597.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs77597 4..210 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs77597.1.1 ID=prot_H-canaliculatus_M_contigs77597.1.1|Name=mRNA_H-canaliculatus_M_contigs77597.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=69bp
MSLRFVRACIQVPFCPMVGSEVYSSEVKKTEILMEHFRRAIGLRIKENKE
VGQTCATVLAVDVVGGEVA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027238	RuvB-like
IPR037938	RUVBL1
IPR010339	TIP49_P-loop
IPR027417	P-loop_NTPase
IPR042487	RUVBL2_DII