mRNA_H-canaliculatus_M_contigs766.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ61_ECTSI) HSP 1 Score: 334 bits (857), Expect = 6.610e-114 Identity = 170/191 (89.01%), Postives = 176/191 (92.15%), Query Frame = 1
Query: 43 RRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAK 615
RRPSVVGL+GGIASGKST+SK L T CGLEVIDADKLGHESY+PGTRCFGKLVD FG IVAGDGTIDRR LG AVFGNPSNMA+LQGIVWPEIRLLAE RIEGLG GAESVVLEAAVLLEAGWD+LCDELWVVQVPPAVAR RLMKRN FDE EADKRIASQPMTN+ERAARATVVLSN GTEEDLVAK
Sbjct: 17 RRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGENIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 207
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA4_9PHAE) HSP 1 Score: 333 bits (853), Expect = 7.890e-112 Identity = 169/194 (87.11%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 43 RRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKE 624
RRPSVVGL+GGIASGKST+SK L T CGL VIDADKLGHESY+PGTRCFGKLVD FG KI+AGDGTIDRR LG AVFGNPSNMA+LQGIVWPEIRLLAE RIEGLG GAESVVLEAAVLLEAGWD+LCDELWVVQVPP VAR RLMKRN FDE EADKRIASQPMTN+ERAARATVVLSN GTEEDLVAK E
Sbjct: 51 RRPSVVGLIGGIASGKSTVSKALGTACGLAVIDADKLGHESYQPGTRCFGKLVDAFGEKIIAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPEVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAKAGE 244
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A2A9HEN9_CHLB2) HSP 1 Score: 199 bits (505), Expect = 1.540e-60 Identity = 108/200 (54.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWASRAGVLR 654
V+GL GGIASGKST++ E G+ VIDAD LGH +Y PGT + K+V+TFG +VA DGTIDR+ LG+ VFG P + KL IVWP IR LA +++ AG E VVLEAAVLLEAGW++L DE+WVV V P +A +RL RN D A RIASQ +TNEER AR V++ N GT ++L A++++ W S LR
Sbjct: 3 VIGLTGGIASGKSTVTSFFR-ERGIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQ-LTNEERIARGDVIIENNGTLDELNARIQQAWDSLQERLR 200
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AGZ2_9CHLR) HSP 1 Score: 194 bits (494), Expect = 8.820e-59 Identity = 103/191 (53.93%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 58 VGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
+GL GGIASGKST++ LA + G +IDAD+LGH +Y+PGT F ++V FGA IV DGTIDR LG VFG P M +L IVWP I LA + + AG E V+EAAVL EAGW+ L DE+WV+ VPPAVAR+RLM RN F +EADKRI SQ ++N ER ARA VV+S + +++ ++V+ W
Sbjct: 4 IGLTGGIASGKSTVTGTLA-DLGATIIDADRLGHRTYEPGTETFAQVVAAFGADIVGEDGTIDRPTLGGKVFGEPGAMTRLTDIVWPGIAALAVEEMAAARAAGVEVAVVEAAVLFEAGWETLVDEVWVISVPPAVARQRLMDRNGFSAEEADKRIGSQ-LSNAEREARADVVISTDCSLDEVRSRVESAW 192
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ82_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.760e-58 Identity = 103/206 (50.00%), Postives = 137/206 (66.50%), Query Frame = 1
Query: 46 RPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWASRAGVLRNRR 663
RP V+G+ GGIASGKS ++++ G+ V+DAD LGH SY GT C+ +L+ TFG +IV DG I+RR LG VF +P +L+GIVWPEIR L E+ + LGE G + V+EAAV+LEAGW++ DE+WVV P VA+ RLM RN ++A +RI +Q MTN+ER +A V+ N GT DL +V+ W R G LR RR
Sbjct: 17 RPLVIGVTGGIASGKSMVTRLCQGRYGVSVLDADILGHRSYAKGTPCYRQLLKTFGEEIVGEDGQINRRALGRIVFSSPQERNRLEGIVWPEIRRLMEEDLRALGETGIHAAVVEAAVMLEAGWEDAMDEVWVVAAEPEVAKTRLMSRNNLSAEDALRRIEAQ-MTNQERIEKADRVIWNNGTVADLEKEVERAWEER-GTLRRRR 220
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E5LXA9_9CHLR) HSP 1 Score: 193 bits (491), Expect = 4.660e-58 Identity = 105/200 (52.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query: 31 WRGSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
W GS R +GL GGIASGKST+++ E G+ VIDAD LGH +Y PGT F +VD FG+ IVA DG+IDRR LG VFG P + +L IVWP IR LA Q + L AG + +LEAAVLLEAGW ++ DE+WV V +A RL +RN DE A RI SQ ++NEER A A+VV+ N GT E+L ++K W
Sbjct: 21 WIGSERVHTIGLTGGIASGKSTVAEFFR-EQGVPVIDADILGHRTYDPGTSTFADVVDAFGSDIVAADGSIDRRALGGKVFGKPEELTRLTDIVWPGIRALASQELSDLEVAGTKIALLEAAVLLEAGWQDMVDEVWVTTVEVDIAVARLAERNGLDETAARARIDSQ-LSNEERIAIASVVIENNGTREELADRIKAVW 218
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YSE9_9GAMM) HSP 1 Score: 190 bits (482), Expect = 3.460e-57 Identity = 98/196 (50.00%), Postives = 143/196 (72.96%), Query Frame = 1
Query: 52 SVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLG-EAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWAS 636
+++GL GGIASGKST++++ G VIDADKLGH +Y+PGTR F +V+ FG +I+A DG+IDR+ LG+ VFG+ + +L GIVWPEIR +AE+ I E +VVLEAAVLLEAGW+++ DE+WVV + P VA ER MKR+ + + + R+A+Q ++N ER A+A V++ N+G+EE+L+A++ + W S
Sbjct: 2 TIIGLTGGIASGKSTVAEITGQR-GAYVIDADKLGHAAYEPGTRAFSAVVEEFGDEILAEDGSIDRKVLGSKVFGSEGGLDRLTGIVWPEIRAMAEEEISTQKIEDPNRTVVLEAAVLLEAGWEDVVDEVWVVVIDPEVAIERAMKRDGVEREAIEARLAAQ-LSNAEREAKADVIIDNSGSEEELLAEIDKKWRS 195
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1VZL7_9CHLR) HSP 1 Score: 188 bits (478), Expect = 1.440e-56 Identity = 102/193 (52.85%), Postives = 133/193 (68.91%), Query Frame = 1
Query: 55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWA 633
V+GL GGIA+GKSTI+ +LA E G VIDADK+GHE+Y+ GT + LV+ FG +I+ DG IDRR LGA VF +P+ LQ IVWP ++ + QR+ L AGA V+EAAVL+EA W +L DE+WVVQVP AVA +RLM RN E EA R+ +Q ++N ERAA A V++ N GT + A+V+ WA
Sbjct: 3 VIGLTGGIAAGKSTIAHILA-ELGAVVIDADKVGHEAYRRGTEAWRALVEHFGERILGPDGEIDRRTLGAIVFADPAERQALQAIVWPRMKEMIRQRLAELRAAGARVAVIEAAVLIEASWTDLVDEVWVVQVPEAVALQRLMARNNLTEDEARARLRAQ-LSNAERAAHADVIIDNRGTVAEARAQVERAWA 193
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=3 Tax=root TaxID=1 RepID=A0A2E7LGZ1_9GAMM) HSP 1 Score: 188 bits (478), Expect = 2.770e-56 Identity = 105/199 (52.76%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 37 GSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESV-VLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
GS R VVGL GGIASGKST + +L E G +IDAD LGH+ Y PGT F +V TFG IVA DGTIDRR LG+ VFGN + +L IVWPEIR LAE I +G+ +V VLEAAVLLEAGWD + DE+WVV V P +A ER M+R+ D + + RI SQ ++N+ER A+A +V+ N+ + LV+++ W
Sbjct: 17 GSTRLRVVGLTGGIASGKSTAATLLG-ELGAHIIDADVLGHQVYNPGTSAFQTVVKTFGEDIVADDGTIDRRALGSKVFGNGDALTRLTDIVWPEIRRLAELEIRKIGDENPNAVIVLEAAVLLEAGWDNIADEIWVVVVDPEIAIERAMQRDGADREAIEARINSQ-LSNDERTAKAHLVIDNSKDQATLVSQINAAW 213
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6G1SRY1_9CHLR) HSP 1 Score: 187 bits (476), Expect = 3.700e-56 Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 1
Query: 55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
V+GL GGIASGKST ++ LA E G VIDAD+LGH Y+PGT F K+V+ FG IVA DGTIDRR LG VFG P M +L I WPEI+ LA Q I+ + G + +VLEAAVLLEAGW++L DE+WVV A A ERL RN E A RI+SQ M+N+ER+ RA V + N+G+ +DL +V+ W
Sbjct: 3 VIGLTGGIASGKSTAAQYLA-ESGAHVIDADRLGHRVYEPGTPGFQKVVNAFGHDIVAKDGTIDRRILGGKVFGAPEQMERLNEIAWPEIKKLAAQEIKDAKQRGDDVIVLEAAVLLEAGWEDLVDEVWVVTTKVATAVERLRTRNGLSEDAAMARISSQ-MSNKERSDRADVKIENSGSVDDLQRRVQRHW 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs766.3.1 >prot_H-canaliculatus_M_contigs766.3.1 ID=prot_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=256bp MKLGGGGGVLWRGSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKback to top mRNA from alignment at H-canaliculatus_M_contigs766:7846..10199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs766.3.1 ID=mRNA_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2354bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs766:7846..10199- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs766:7846..10199- >mRNA_H-canaliculatus_M_contigs766.3.1 ID=mRNA_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=768bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs766:7846..10199- (Hapterophycus canaliculatus Oshoro7m male)back to top |