mRNA_H-canaliculatus_M_contigs765.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs765.3.1
Unique NamemRNA_H-canaliculatus_M_contigs765.3.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR1_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 7.480e-172
Identity = 242/252 (96.03%), Postives = 248/252 (98.41%), Query Frame = 3 
Query:   96 MLCHSAAGPARGAGHAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            MLCHSAAGPARGAGHA AAMDGTRQHT+QPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVG+CTL+GASGEYSDFQHIMETLED HQYDVNMDDGFERSP+EIYNLLRT+MYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKAT EGTVVSDAY VDT+WSLASFSQPKAGQDTDGSW
Sbjct:    1 MLCHSAAGPARGAGHATAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 252
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q8_9STRA)

HSP 1 Score: 371 bits (953), Expect = 1.500e-122
Identity = 181/234 (77.35%), Postives = 205/234 (87.61%), Query Frame = 3 
Query:  153 MDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCK-KDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            MD  RQ T  PIVTGTSV+G+KYKDGVMLAADTLASYGSLARYK+VER++PVG+ TL+GASGEYSDFQ IME LED  Q D NMDDGF+R+P+E+++ LR +MYNRRNK NPLWNYLLIAG   + G  FLGSVDHIGT YED+ILATGFG HLALPILR++WR D+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT EG +VSD YT++T WSLA+F+QPKAG DTDGSW
Sbjct:   38 MDAPRQRTQSPIVTGTSVIGLKYKDGVMLAADTLASYGSLARYKSVERIRPVGESTLLGASGEYSDFQAIMEMLEDQTQEDRNMDDGFKRAPAEVHSYLRAVMYNRRNKMNPLWNYLLIAGVNPRTGGFFLGSVDHIGTAYEDDILATGFGAHLALPILRRRWRADMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATREGVLVSDPYTIETSWSLAAFAQPKAGADTDGSW 271
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSS8_9STRA)

HSP 1 Score: 321 bits (822), Expect = 7.290e-103
Identity = 155/228 (67.98%), Postives = 187/228 (82.02%), Query Frame = 3 
Query:  168 QHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            QHTT+PIVTGTSV+GIKYKDGVMLAADTLASYG+LA +K+VER+  V    L+GA GEYSDFQ I + L+     D NMDDG + SPSEI++ LR +MY RRNK NPLWN++L+AG K +G +FLGSVD IGT +ED+ LATGFG +LA+PILRKKWRPDL+EGEARALLE+C+RVLFYRDCRALN+I++AKAT EG+V+SD YT++T WS ASF   K G D DG W
Sbjct:   44 QHTTRPIVTGTSVIGIKYKDGVMLAADTLASYGTLAMFKDVERIHKVSDSCLIGAGGEYSDFQKIQQVLDRLTSEDRNMDDGHQTSPSEIFHYLRAVMYQRRNKMNPLWNHVLVAGFK-EGKSFLGSVDLIGTAFEDDFLATGFGSYLAIPILRKKWRPDLDEGEARALLEECLRVLFYRDCRALNKIRLAKATAEGSVISDPYTLETSWSAASFQTVKGGLDADGGW 270
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W5_AURAN)

HSP 1 Score: 315 bits (807), Expect = 6.760e-101
Identity = 153/229 (66.81%), Postives = 185/229 (80.79%), Query Frame = 3 
Query:  165 RQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            RQHT++PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V+R+   G  TLVGASGE SD+  I+  LE   + ++N +DGFE SP EIY+ LR +MY  RNKFNPLWN L++ G K DG AFLGSVD  GT YED+++ATGFG HLALPI+R KW  D++EGEARALLEDC+RVLFYRDCRAL+ + ++KAT +GT+VSD Y ++TDWS ASF  PKAG+D DG W
Sbjct:   24 RQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYTLVGASGEMSDYHAILRKLEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYK-DGKAFLGSVDLRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFYRDCRALDMVVLSKATADGTLVSDPYKIETDWSSASFVVPKAGEDGDGGW 251
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJK1_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.230e-98
Identity = 153/237 (64.56%), Postives = 186/237 (78.48%), Query Frame = 3 
Query:  141 AAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            A AA    RQHT++PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V R+   G  TLVGASGE SD+  +++ L+   Q + N DDGFE  P+EIY+ LR ++Y RRNKF+PLWN L++ G K DG  FLGSVD  GT YED+++ATG+G HLALPI+R KW PDL+EGEARALLEDC+RVLFYRDCRAL+ + ++KAT  GT+VSD Y ++TDW+ ASF  PKAG D DG W
Sbjct:   37 ATAAEAPARQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVTRIARTGSYTLVGASGELSDYHALLDKLKGLAQANANCDDGFEHGPAEIYSYLRAVLYQRRNKFDPLWNSLVVGGFK-DGAPFLGSVDLRGTAYEDDVIATGYGSHLALPIMRAKWTPDLDEGEARALLEDCLRVLFYRDCRALDTVVLSKATATGTLVSDPYKLETDWTSASFVAPKAGGDGDGGW 272
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8AP70_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.460e-95
Identity = 146/227 (64.32%), Postives = 177/227 (77.97%), Query Frame = 3 
Query:  171 HTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            HT +PIVTGTSVLG+KYKDG+M+AADTLASYGSLA +K V R+ P G  TLVG SGE SDF HI+  LE+  + ++N DDGFE  P+EIY  LRT+MYNRR+K NPLWN L++ G  KDG +FLG VD  GT Y D+++ATG+G HLA+P++R KWRP LEEGEAR LLEDC+RVLFYRDCRAL+ I ++KAT +GT+VS  Y + TDWS ASF  PKA  D DG W
Sbjct:   32 HTQRPIVTGTSVLGLKYKDGIMMAADTLASYGSLAMFKEVTRIAPAGTNTLVGGSGEMSDFHHILRLLEELGRENLNADDGFEHPPAEIYRYLRTVMYNRRSKLNPLWNQLVVGG-HKDGESFLGVVDLRGTAYTDDVVATGYGAHLAMPVMRNKWRPGLEEGEARNLLEDCLRVLFYRDCRALDTIILSKATDQGTLVSPPYKLTTDWSSASFVVPKADDDGDGGW 257
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE8_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.380e-93
Identity = 144/225 (64.00%), Postives = 181/225 (80.44%), Query Frame = 3 
Query:  138 HAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASF 812
            HAA +      HTTQPIVTGT+V+GIKY  GVMLAADTLASYGSLARYK+V RLK VG+ TL+GASGE SDFQ IME L+  +Q D+N DDG++RSPSE +N LR ++Y +R K NPLWN LL+AG  K+   FLG VD IGT YE+N +ATGFG +LA+P++R+KW  +++EGEAR+LLEDC+RV+FYRDCRALNRIQIAKA+ +GT+VS+ Y + T+W  A+F
Sbjct:   11 HAALSPHAPTTHTTQPIVTGTTVIGIKYNGGVMLAADTLASYGSLARYKDVRRLKQVGENTLIGASGEISDFQTIMEMLDSMNQSDINEDDGYKRSPSEYFNYLRAILYQKRGKGNPLWNQLLVAGFHKEAP-FLGYVDLIGTAYEENFIATGFGAYLAIPLIREKWYAEMDEGEARSLLEDCLRVMFYRDCRALNRIQIAKASADGTLVSEPYEISTEWETANF 234
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8W8_9DINO)

HSP 1 Score: 290 bits (742), Expect = 3.310e-91
Identity = 132/228 (57.89%), Postives = 179/228 (78.51%), Query Frame = 3 
Query:  168 QHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            +HTTQPIVTGTSV+ IKYKDGVM+AADTL SYG LAR+ ++ RLK VGK TL+G SGEYSDFQ+I+  L++  + D N++DG E +  E++N L  +MYNRRNK NPLWN +++AG + DG A LG+VDHIGT Y ++ + TGFGGH+A+P++R+ W+PD+ E +ARAL+E+CM++L+YRDCR +N+I +AK T EG +VS+ +T+ T W   SF + KAG DT GSW
Sbjct:   22 KHTTQPIVTGTSVIAIKYKDGVMMAADTLGSYGGLARFTDLRRLKVVGKSTLIGCSGEYSDFQYILSLLDELVEEDANVEDGRELTAEEVHNYLTRVMYNRRNKGNPLWNSIVVAGVE-DGVATLGTVDHIGTAYTEDFIVTGFGGHMAIPLIRESWKPDMSESDARALVEECMKILYYRDCRTINKITLAKITAEGGMVSEPFTLATKWDFQSFIKAKAGADTGGSW 248
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9Q9_9STRA)

HSP 1 Score: 279 bits (714), Expect = 6.580e-87
Identity = 147/252 (58.33%), Postives = 176/252 (69.84%), Query Frame = 3 
Query:  123 ARGAGHAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIME-----TLED----DHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGSW 851
            A G  +  AA       TT+PIVTGTSVLGIKY  GVMLAADTL SYG +A+YK+  RL  V   TL+G  GEYSDF  + E      LED    D  YD +   G  R   E++N LR +MYNRRNK NPLWN LL+AG   +G  FLG VD IGT YEDNI+ATGFG +LA+P++R+K+RPD+EEGEARALLEDCMRVLFYRDCRALNRIQIAKAT +  ++SD Y ++T+W  A + +PK   D DG W
Sbjct:    8 AGGVSNVRAASLSATDRTTRPIVTGTSVLGIKYAGGVMLAADTLCSYGGMAKYKDARRLVDVNGKTLIGGGGEYSDFTAVCELLKRNALEDKCTSDSLYDEDNTHGCAR---EVWNYLRAVMYNRRNKMNPLWNELLVAGYSSEGQPFLGYVDKIGTTYEDNIVATGFGSYLAMPLMREKYRPDMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATPDEVLISDPYELETNWDSAEYMKPKGQLDGDGGW 256
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUY2_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.030e-86
Identity = 134/225 (59.56%), Postives = 170/225 (75.56%), Query Frame = 3 
Query:  174 TTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAYTVDTDWSLASFSQPKAGQDTDGS 848
            TTQPIVTG+SVLGIKYKDGVMLAADTLASYGSLARYKN++R++ V   TL+GASGE SDFQ I E L    Q D+N DDG+ +SP EI+N LR ++Y RR K NPLWN LLIAG +K    FLG VD IGT Y++N +ATG+G +LA+P++R++W  DL E EA+ LLE+C+RVLFYRDC+A NRI I+KAT++G  +S+ Y +  +W  A+F        +DGS
Sbjct:   23 TTQPIVTGSSVLGIKYKDGVMLAADTLASYGSLARYKNIKRIEKVNNSTLIGASGEISDFQSISEMLSSIEQDDINQDDGYTKSPIEIFNYLRAVLYQRRGKGNPLWNQLLIAGYRKGQEPFLGYVDLIGTSYQENFIATGYGAYLAIPLIRERWHKDLSEDEAKKLLEECLRVLFYRDCKASNRIIISKATIDGVSISEPYEITHNWETATFDARHPTSGSDGS 247
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs765.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Proteasome7.480e-17296.03subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
Proteasome1.500e-12277.35subunit beta n=1 Tax=Tribonema minus TaxID=303371 ... [more]
Proteasome7.290e-10367.98subunit beta n=1 Tax=Rhizochromulina marina TaxID=... [more]
Proteasome6.760e-10166.81subunit beta n=1 Tax=Aureococcus anophagefferens T... [more]
Proteasome1.230e-9864.56subunit beta n=3 Tax=Pelagomonas calceolata TaxID=... [more]
Proteasome1.460e-9564.32subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
Proteasome1.380e-9364.00subunit beta n=1 Tax=Spumella elongata TaxID=89044... [more]
Proteasome3.310e-9157.89subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
Proteasome6.580e-8758.33subunit beta n=1 Tax=Eucampia antarctica TaxID=492... [more]
Proteasome1.030e-8659.56subunit beta n=1 Tax=Chromulina nebulosa TaxID=967... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs765contigH-canaliculatus_M_contigs765:6808..11328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRR1
Preferred namePSMB4
PFAMsProteasome
Model size1768
Max annot lvl2759|Eukaryota
KEGG koko:K02736,ko:K05542,ko:K18740
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorysignal peptide
GOsGO:0000226,GO:0000502,GO:0001530,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005840,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007098,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008289,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016043,GO:0016579,GO:0016787,GO:0019538,GO:0019774,GO:0019941,GO:0022402,GO:0022607,GO:0022626,GO:0030071,GO:0030163,GO:0031023,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034622,GO:0036211,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046686,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065003,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080134,GO:0090068,GO:0097367,GO:0098827,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
Exons7
Evalue2.11e-177
EggNOG OGsKOG0185@1|root,KOG0185@2759|Eukaryota
Ec32 ortholog description20S proteasome beta subunit
Ec32 orthologEc-08_002100.1
EC1.3.1.88,3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size825
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03016,ko03019,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs765.3.1prot_H-canaliculatus_M_contigs765.3.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs765 7722..11299 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854103.594079-UTR-H-canaliculatus_M_contigs765:6807..77211696854103.594079-UTR-H-canaliculatus_M_contigs765:6807..7721Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs765 6808..7721 -
1696854103.693014-UTR-H-canaliculatus_M_contigs765:11299..113281696854103.693014-UTR-H-canaliculatus_M_contigs765:11299..11328Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs765 11300..11328 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854103.6099572-CDS-H-canaliculatus_M_contigs765:7721..77931696854103.6099572-CDS-H-canaliculatus_M_contigs765:7721..7793Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 7722..7793 -
1696854103.6236691-CDS-H-canaliculatus_M_contigs765:8581..86961696854103.6236691-CDS-H-canaliculatus_M_contigs765:8581..8696Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 8582..8696 -
1696854103.6366656-CDS-H-canaliculatus_M_contigs765:9044..91491696854103.6366656-CDS-H-canaliculatus_M_contigs765:9044..9149Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 9045..9149 -
1696854103.6490102-CDS-H-canaliculatus_M_contigs765:9463..95531696854103.6490102-CDS-H-canaliculatus_M_contigs765:9463..9553Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 9464..9553 -
1696854103.659457-CDS-H-canaliculatus_M_contigs765:9822..99901696854103.659457-CDS-H-canaliculatus_M_contigs765:9822..9990Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 9823..9990 -
1696854103.6697223-CDS-H-canaliculatus_M_contigs765:10446..105271696854103.6697223-CDS-H-canaliculatus_M_contigs765:10446..10527Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 10447..10527 -
1696854103.682208-CDS-H-canaliculatus_M_contigs765:11105..112991696854103.682208-CDS-H-canaliculatus_M_contigs765:11105..11299Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs765 11106..11299 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs765.3.1

>prot_H-canaliculatus_M_contigs765.3.1 ID=prot_H-canaliculatus_M_contigs765.3.1|Name=mRNA_H-canaliculatus_M_contigs765.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=275bp
MLARSLCSAVLFLLSPGGLSSSMLCHSAAGPARGAGHAAAAMDGTRQHTT
QPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVG
ASGEYSDFQHIMETLEDDHQYDVNMDDGFERSPSEIYNLLRTMMYNRRNK
FNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILR
KKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATVEGTVVSDAY
TVDTDWSLASFSQPKAGQDTDGSW*
back to top

mRNA from alignment at H-canaliculatus_M_contigs765:6808..11328-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs765.3.1 ID=mRNA_H-canaliculatus_M_contigs765.3.1|Name=mRNA_H-canaliculatus_M_contigs765.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4521bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs765:6808..11328- (Hapterophycus canaliculatus Oshoro7m male)
AGTCGGTTCTCGCGTTCTCGAAGCATTGAATGCTCGCACGCTCGCTGTGC
TCTGCAGTTCTTTTCCTTCTTTCACCGGGTGGTTTATCTTCTAGCATGCT
CTGCCACTCCGCTGCCGGTCCCGCTCGAGGAGCGGGACACGCCGCGGCCG
CGATGGACGGAACAAGGCAGCACACTACACAGCCGATCGTCACGGGTACT
TCGGTCCTCGGTATCAAATACAAGTGAGTACGCGCAAGTTTGTGGGATGT
GCAACCATAGCGGTCCTTTCGATAAATGGGGGCTAGTCTAGCGGGCAATT
GATAGCCTTTCGCGCAGCGGTAGCGTACCTATTTTACATCCCAGGTGGGT
TTTTCTGAGGCATTTGTTCGTCGCGTGAACCTTACCCCATCTTTCCAATA
GAAACGCGCCGTTCCAACATGGAGTATGACTGTCTCTAATGTGCTCTGCG
CGCCACCATACTGCTATTTCAACTTTTTTTGGAATTTTGGTGCAGACTAC
TGCTCATCATTGCCTATGGGTGACCAACTCGCGGAAAGTTAAGCCTCACC
AAGCAGTACGTTCCATCCGACACCGCGCTGTCCTACCTGTTACCTGCCAC
TGACTTCTGTGTCAAGCTGTCAAGCTCGCGCGGGGGTACATCAAGCCCAG
AAAACTGTCAAGAAACTGCACATCAAACGCAGAGGTTTTCGTACCTGGGC
AAGGTAAGGTAGTCATACGCCCGACGTTCCGTGAAAACGTGAAAACGTGA
AAATGCCTCTTATGTGACCGCTCGTTTTGCTTTGCTGTTGGTGCCTGGCA
GGGATGGAGTCATGCTCGCAGCGGACACCTTGGCATCGTACGGTAGCTTG
GCCCGCTACAAAAACGTCGAACGTTTGAAACCGTGAGTTCCTGGAAGAGT
AAACTGTCTTGCCAAAAGTGCATCCTGAATGCTTTCTCTCCTCCGACCGC
GACATGGATTGCCTCAACTTTTTCACAGCTTCTCGCGACTGTGTCGTGCT
CTTAACCTGGCGAGTGGCTCCCTAGTCAACACTTGACTGTTGAACTGTAA
TTCCGACACACCGCAATACTTTATCGAGAGCAGTCGCCTCGGCATGCTCT
GTACGACTCGTGCACGTCATGGCGTTGATCGAGCGCGGTAAGTCCGCGTC
AGAGCTTAAAGGTCACGCCCAGAATGTCGTGGCGGCGCGAAACGATGTTG
TCCTGTCTAGCCGAAGCACGAGCTTACCCTGAGTCAGCATCGTCCATACG
GAAAGTGCCCAGGCTTGGTCATCATGCGTCATCGCTGGCGTTCATTTGCC
CGTCACGCGTCCCATGTAATGGTGCTGTGCTGATACAGGGTGGGGAAGTG
CACGCTCGTGGGGGCATCCGGGGAGTACTCCGACTTCCAGCACATCATGG
AGACCCTCGAGGACGACCACCAGTATGATGTGAACATGGACGACGGCTTC
GAAAGAAGCCCATCCGAGATCTACAACCTACTGAGGACCATGATGTACAA
CCGCCGGTGAGGTCTGGAAACTGGCGCTGTTTGCCCTTCGTACCTCACCA
TACCTGCGCCTCGAGTACGGATTCGATCCTCACAGCACGTGATGAGGAGC
TTTACGTATGAGATTCTGCCATCGGAAGGCGCCAGCTTGAGTGTTGCCTC
CTGTCAAAAGAGAAGCTAAAGTGCGTTCGGCCTCTCTTGCTCTCTTGCTT
GGTTGTGGGCCTGCTTTCGTTCTCATGCGATGCGATGCTTCTTTCCCTCG
TTCCTTTCGTCTCTGCCGAATCCAGAAACAAATTCAACCCCTTGTGGAAC
TACCTGCTCATCGCCGGGTGCAAGAAGGACGGCACGGCTTTCCTTGGATC
TGTTGACCACATCGGGTATGAGCTCGACATGTGTGCTTGAAAATGACCAG
TTTTTGTGGTCGATTTACCAGTACATGTCCAGGTAGCTGCGTCGCTTTCC
GTCGGGGAGAGCACGTCTTTGTGCGTGTGGCTTGCGATGCATTGGGTAAA
GTGTCTTGCCAACAGCATCTGCTCGCTGTCGTACCGCTTTTTATTTGTTT
TCTTTTGCTCTCAGTTGGTTCTTTGCTGGGCATGTTGGCACGTTTCTGTT
GCTTGCCTGAGCATTGGTCGCTGCGTTTCGGAGAATTTTAGCGCCTTTGA
AACCCGTTATCCGGGAAACCAATTTACAGGACCTGCTACGAGGACAACAT
CCTTGCCACGGGCTTCGGCGGGCACCTGGCGCTGCCAATCCTTCGCAAGA
AGTGGAGGCCGGACTTGGAAGAGGGAGAGGCTCGGTGAGCGCTGACAAGA
ATGCGACCGCGGGTTCGTGACGACGGCGTCCCGCAATATGCACAAGTAGG
GGGTTTGATCAATATCCGGGTCAGTACTCTGACCTGCTTGTGGCAGTTGA
CGACCACTCGCATGTGCGCGACACTAGGCAGGTCCACGTCCAAGCACGAT
AAACTGATTGCCGGGTGTTTTCAGACCGAATTCAAAAAGCGTGCCGTGGA
AGTCGATTTCCTGACGGGTGATGCTCCTGTCGCATCGACGGGGTACCAAT
GCTTCACGCGTGGTTTTCTTGCTTCGCTCTTAACGCGCTTCTTTCGTCTC
GTGCTGTTTGGTTGTCGGATTTTAAATAACAGGGCCTTGCTGGAAGACTG
CATGCGCGTGCTCTTCTATCGCGACTGCCGCGCGCTAAACCGGATCCAGA
TCGCGAAGGCTACCGTAGAAGGCACGGTCGTGAGCGATGCTTACACGGTA
GGTGGTCAACTGGTCCGGCACGGGTGCGTTGGGGTGCGCGCAAGTTGTTG
GGGCAGTCATGTCGCAGATTAGAAATGTTATCGAAGCGAGAACCTCCCGT
GCGTTGAAGTGCGCGTTTTCATGTATCCTCGGCGTAGACGATAGTTTGTC
ACGTAGTGCACAAAATTGCATCATACACTGCAGGGAAGACAGTGCGCCGC
GGTTCACGTATCAAGTGCCGATAAACCCTGCAAATCCTCCGCGTAGATAT
GGAACATGACGTAAGTAGATATCTCGAGATTTTTCACATTGCCAATCCAC
CTCCAAAGCTCGATATCTCAAAAGGAGAACGATTGTCAAATCCACCTCGC
CTCGTCGAGAAGAACTCGATTCGGTTGTTTTTCAAAACCATTCTTTACGC
GAGAATCGTGGTGGTATCGAAATTTTAGACCCCGCCTAGGGTCATGGTGT
GTTGGAGGACGTGAGATGGGAGCGTCCGTGGCTTGAACTCCCGACGGTAG
GGTAAGAGCAATTGATCTCGCAAACGCAAACGCCGAAGTTATCTTGCTGA
GCTCTTTAGAAACATGTCCTTGAAGGGGGCTTCGTTCTTCTATACAGGTT
GCGGGCATCCGATGCTGTTGTCTTTCGTTTTCAGACCTCTTGTCCAACCT
TTCGCAAGCGCGGAGACAGTCACATCCCAGCTTGCACGGGTATCGCGCTG
CACATGCAAGAAACTACGGTGTCGAAAATAAGAGTATGGGCGCTTTCGAT
CCCTTTGCATCCCCGTCCGTGTCGCTAATCATTAGGTGGACACAGACTGG
AGTTTGGCCTCGTTCAGTCAGCCGAAGGCGGGACAGGATACTGACGGGAG
CTGGTGATGACGGCGATGAAGATTTCTAGCTTTTTAGGCTGCGCCCGGCG
TCATAGGCGCGGAGTTGCAGAGGACCCCAACAGGGAATATCTGGGGTCAA
AAACTTTGGCATTCGTCGCAAACGAACTGTGGTCACAAACAAAAATATAC
CTGGTGCATCCAGTAGCGTTTGCGCTTGTTTGAGACCGCAAGTAACGGCT
GGGACCGGCTACGCGCTTTGCCTGTTTGTGTAGGGCGCTGTCGCCGCTGG
CGGGCCGATGACGATCTCGATTGGTGCCCCATTCTTGTTTCGACGGAATC
TCAAGAGCTCCACGTATTTCTTTTCTAGGGCAGGCCATCTTCGAAACTGT
TGGGTACACTGGGAAAGTATTCAGTGGCGCTGACGATGTTTTGTGAGTTG
TCGTGTCATCGTGTCTCTGGAGGAATGCCAGATGGGTTTAAGTTTCATTT
TCGTTTCGGCAGCCCTAGGAGCAATGCGTACGCTGACATTGAGCACTTCA
TGGAAGCATGAGAGTTCCCTTGCGTAGCCTCAATACTATCCTGAGCAAAG
TTCCATGCGCTGAGGGCCGCTGCTGCATGCGCCCCTTCAAAATGGGGAGA
ACTCGCGGCGCACTTGGGTAACACCGGTTATTATGAGAGCAGAAAGTTGA
GGGAAAAGTGAAAGTTTGCAAAAATTTCTCTGAACTTTTCTCCTGTGCTC
CTTATGGGAGCAAAAAGTCCGACGAAAAGTTTGCAATTTTTGTTTGGGAC
AAAATCGCTCGGTCCGGCCGAAAAGTTTGCAAATTTTTCGCGCAGCAGAA
GTGCGAAGAAAAGCTGCACGGCGGAAATTATACCGGTTCGGGGGTGGGTC
AACTTGTAGATGTATACTGACACGCACTGTTACTCAGGGTTGTCACACGC
AATCAGATACACCAACACACA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs765:6808..11328-

>mRNA_H-canaliculatus_M_contigs765.3.1 ID=mRNA_H-canaliculatus_M_contigs765.3.1|Name=mRNA_H-canaliculatus_M_contigs765.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=825bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs765:6808..11328- (Hapterophycus canaliculatus Oshoro7m male)
ATGCTCGCACGCTCGCTGTGCTCTGCAGTTCTTTTCCTTCTTTCACCGGG
TGGTTTATCTTCTAGCATGCTCTGCCACTCCGCTGCCGGTCCCGCTCGAG
GAGCGGGACACGCCGCGGCCGCGATGGACGGAACAAGGCAGCACACTACA
CAGCCGATCGTCACGGGTACTTCGGTCCTCGGTATCAAATACAAGGATGG
AGTCATGCTCGCAGCGGACACCTTGGCATCGTACGGTAGCTTGGCCCGCT
ACAAAAACGTCGAACGTTTGAAACCGGTGGGGAAGTGCACGCTCGTGGGG
GCATCCGGGGAGTACTCCGACTTCCAGCACATCATGGAGACCCTCGAGGA
CGACCACCAGTATGATGTGAACATGGACGACGGCTTCGAAAGAAGCCCAT
CCGAGATCTACAACCTACTGAGGACCATGATGTACAACCGCCGAAACAAA
TTCAACCCCTTGTGGAACTACCTGCTCATCGCCGGGTGCAAGAAGGACGG
CACGGCTTTCCTTGGATCTGTTGACCACATCGGGACCTGCTACGAGGACA
ACATCCTTGCCACGGGCTTCGGCGGGCACCTGGCGCTGCCAATCCTTCGC
AAGAAGTGGAGGCCGGACTTGGAAGAGGGAGAGGCTCGGGCCTTGCTGGA
AGACTGCATGCGCGTGCTCTTCTATCGCGACTGCCGCGCGCTAAACCGGA
TCCAGATCGCGAAGGCTACCGTAGAAGGCACGGTCGTGAGCGATGCTTAC
ACGGTGGACACAGACTGGAGTTTGGCCTCGTTCAGTCAGCCGAAGGCGGG
ACAGGATACTGACGGGAGCTGGTGA
back to top