mRNA_H-canaliculatus_M_contigs764.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs764.2.1
Unique NamemRNA_H-canaliculatus_M_contigs764.2.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP5_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 1.070e-47
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 1
Query:  190 MGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            M SLR+PKRLT+HGDDE+DHMFLVKGGEDLRVDQRVEQLFEVMNAVMA SA C RARL N TYKV+PVTP+IGLIEWVQNTRPLKSVIEQGL
Sbjct:    1 MNSLRLPKRLTMHGDDEKDHMFLVKGGEDLRVDQRVEQLFEVMNAVMATSAGCRRARLSNTTYKVVPVTPEIGLIEWVQNTRPLKSVIEQGL 92          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZCC3_9MYCE)

HSP 1 Score: 160 bits (404), Expect = 1.680e-42
Identity = 74/159 (46.54%), Postives = 111/159 (69.81%), Query Frame = 1
Query:    1 MAKAKNDASSGRAKLWQFSGWMSDFDSNKHRL----EVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            MAK     S+   KL  FS W+++FD + H L    E+PGQY G   + P+   H +I SF + +LVMGSLR PKR+ IHG+DE+D+ FL+KGGEDLR+DQR++QLF++MN ++ +    S+  LR  TY+V+P+T  +G+IEW+ +T+P++ +IE+ L
Sbjct: 3756 MAKNMKPTSTASMKLKDFSQWLTEFDKSNHPLSMEMEIPGQYSGF--SKPQPEQHIKISSFDATILVMGSLRKPKRIKIHGNDEKDYPFLIKGGEDLRLDQRIQQLFQIMNEILKRDPPASKRGLRVTTYQVVPMTSSVGIIEWLNDTKPVREIIEEQL 3912          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J6V1_ACTTE)

HSP 1 Score: 159 bits (402), Expect = 3.120e-42
Identity = 76/143 (53.15%), Postives = 102/143 (71.33%), Query Frame = 1
Query:   43 LWQFSGWMSDFDSNKH--RLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            L ++S W+  F S+ +  RLE+PGQY G     P   +H++I  F   +LVM S+R PKRLTI GDDE+D+MFLVKGGEDLR+DQR+EQLF +MN ++A   +C +  L  +TY+V+P+TP +GLIEWV NTRPLK  I Q +
Sbjct: 3694 LKEYSPWLLSFQSSNYTQRLEIPGQYTGR--GKPLTEYHAKIAGFDERVLVMTSIRKPKRLTIRGDDEKDYMFLVKGGEDLRLDQRIEQLFCLMNDILAADPACKQRNLHLRTYQVVPMTPRVGLIEWVTNTRPLKEFISQAM 3834          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: Non-specific (serine/threonine protein kinase (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SPT8_NEMVE)

HSP 1 Score: 158 bits (400), Expect = 5.630e-42
Identity = 74/139 (53.24%), Postives = 106/139 (76.26%), Query Frame = 1
Query:   43 LWQFSGWMSDFDSNKH--RLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVI 453
            L ++S W+++F ++ H  +LEVPGQY G   + P   +H  I  F  ++LV+ S+R PKR+TI GDDERDHMFLVKGGED+R+DQR+EQLF +MN VM++  +CS+  LR +TY+VIP+T  +GLIEW++NT+PLK ++
Sbjct: 1421 LKEYSPWLTNFQADSHAQKLEVPGQYTGQ--SKPMPEYHVNIAGFDEKVLVLASIRKPKRVTIRGDDERDHMFLVKGGEDIRLDQRIEQLFCMMNEVMSEDPACSQRNLRLRTYQVIPMTQRVGLIEWLKNTKPLKELL 1557          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E58D02)

HSP 1 Score: 158 bits (400), Expect = 5.790e-42
Identity = 76/143 (53.15%), Postives = 102/143 (71.33%), Query Frame = 1
Query:   43 LWQFSGWMSDFDSNK--HRLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            L ++S W+  F S++  H LE+PGQY G     P   +H +I  F   +LV+ S+R PKRL I GDDE+DHMFLVKGGEDLR+DQR+EQLF +MN VMA   +CS+  LR +TY+VIP+TP +GLIEW+ NT+P K V++  +
Sbjct: 3593 LKEYSPWLFRFQSSEYTHTLEIPGQYTGR--TKPLPEYHVKIAGFDERVLVLSSIRKPKRLIIRGDDEKDHMFLVKGGEDLRLDQRIEQLFGLMNDVMADDPACSQRGLRLRTYQVIPMTPRVGLIEWINNTKPFKEVLQGAM 3733          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit isoform X1 n=3 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013902A4B)

HSP 1 Score: 158 bits (400), Expect = 5.790e-42
Identity = 74/139 (53.24%), Postives = 106/139 (76.26%), Query Frame = 1
Query:   43 LWQFSGWMSDFDSNKH--RLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVI 453
            L ++S W+++F ++ H  +LEVPGQY G   + P   +H  I  F  ++LV+ S+R PKR+TI GDDERDHMFLVKGGED+R+DQR+EQLF +MN VM++  +CS+  LR +TY+VIP+T  +GLIEW++NT+PLK ++
Sbjct: 3688 LKEYSPWLTNFQADSHAQKLEVPGQYTGQ--SKPMPEYHVNIAGFDEKVLVLASIRKPKRVTIRGDDERDHMFLVKGGEDIRLDQRIEQLFCMMNEVMSEDPACSQRNLRLRTYQVIPMTQRVGLIEWLKNTKPLKELL 3824          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZGH1_DICPU)

HSP 1 Score: 158 bits (399), Expect = 7.900e-42
Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 1
Query:    1 MAKAKNDASSGRAKLWQFSGWMSDFDSNKH----RLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            M K     S+   KL  FS W+++FD + +    +LE+PGQY G     P+   H  I SF S +LVMGSLR PKR+ IHG+DERD+ FL+KGGEDLR+DQR++QLF +MN ++ +  SC++  L+  TY+VIP+T  +G+IEW+ +TRPL+ ++E  +
Sbjct: 3699 MNKNMRPTSTATMKLKDFSYWLTEFDRSNYPTSKQLEIPGQYNGF--GKPQPETHVTISSFDSNILVMGSLRKPKRIKIHGNDERDYPFLIKGGEDLRLDQRIQQLFMIMNEILKRDNSCNKRGLKVTTYQVIPMTSKVGIIEWINDTRPLREILEDQI 3855          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PRKDC_DICDI)

HSP 1 Score: 158 bits (399), Expect = 7.900e-42
Identity = 73/159 (45.91%), Postives = 110/159 (69.18%), Query Frame = 1
Query:    1 MAKAKNDASSGRAKLWQFSGWMSDFDSNK----HRLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            M K     S+   KL  FSGW++DFD +     H++E+PGQY G+    P+   H  I SF + +LVMGSLR PKR+ IHG+DE D+ FL+KGGEDLR+DQR++QLF +MN ++ +  +C++  L   TY+V+P+T  +G+IEW+ +T+PL+ ++E+ L
Sbjct: 3829 MNKNMKPNSTASMKLKDFSGWLADFDRSNYQTSHQMEIPGQYDGI--GKPQPETHVTISSFDTNVLVMGSLRKPKRVKIHGNDELDYPFLIKGGEDLRLDQRIQQLFGIMNEILKRDTACNKRSLNVTTYQVVPMTSKVGIIEWLNDTKPLREILEEQL 3985          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: DNA-dependent (protein kinase catalytic subunit-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F55426D)

HSP 1 Score: 157 bits (396), Expect = 2.000e-41
Identity = 75/139 (53.96%), Postives = 101/139 (72.66%), Query Frame = 1
Query:   43 LWQFSGWMSDFDSNK--HRLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVI 453
            L ++S W+S F +    H +E+PGQY G     P   +H +IV F  ++LV+ S+R PKRL I GDDE+DHMFLVKGGEDLR+DQR+EQLF +MN +MA    CS+  L+ +TY+VIP+TP +GLIEW+ NT+PLK V+
Sbjct: 3717 LKEYSPWLSRFQATDFAHAMEIPGQYKGK--TKPLPEYHVKIVGFDEKILVLKSIRKPKRLVIRGDDEKDHMFLVKGGEDLRLDQRIEQLFGLMNDIMANDPVCSQRGLKLRTYQVIPMTPRVGLIEWMNNTKPLKEVL 3853          
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTP8_HETAK)

HSP 1 Score: 154 bits (388), Expect = 2.410e-41
Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = 1
Query:   40 KLWQFSGWMSDFDSNKHRLEVPGQYGGLMAAPPRVSHHSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVEQLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSVIEQGL 465
            +L  FS W++ FD +++ +E+PGQY G     PR   H+++V+FG +LL + SLR PKRLT+H +DE+++ FLVKGGEDLR D+R+EQ+F VMN +    A C++++L  +TY VIP+T  +G+IEWV  T+PLK +I++ +
Sbjct:   57 ELSDFSQWLASFDHDEYTIEIPGQYSGDKL--PRPDQHAKVVNFGGQLLQLDSLRRPKRLTVHANDEKEYNFLVKGGEDLRQDERIEQMFGVMNNLFDADAKCAQSKLHIRTYSVIPMTTAVGMIEWVPETKPLKGIIQEEM 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs764.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.070e-4788.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Non-specific1.680e-4246.54serine/threonine protein kinase n=1 Tax=Tieghemost... [more]
DNA-dependent3.120e-4253.15protein kinase catalytic subunit n=2 Tax=Actinia t... [more]
Non-specific5.630e-4253.24serine/threonine protein kinase (Fragment) n=1 Tax... [more]
DNA-dependent5.790e-4253.15protein kinase catalytic subunit-like n=1 Tax=Orbi... [more]
DNA-dependent5.790e-4253.24protein kinase catalytic subunit isoform X1 n=3 Ta... [more]
DNA-dependent7.900e-4247.17protein kinase catalytic subunit n=1 Tax=Dictyoste... [more]
DNA-dependent7.900e-4245.91protein kinase catalytic subunit n=1 Tax=Dictyoste... [more]
DNA-dependent2.000e-4153.96protein kinase catalytic subunit-like n=1 Tax=Poci... [more]
Non-specific2.410e-4147.89serine/threonine protein kinase n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs764contigH-canaliculatus_M_contigs764:7820..9926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKP5
Preferred namePRKDC
PFAMsFAT,FATC,NUC194,PI3_PI4_kinase
Model size465
Max annot lvl2759|Eukaryota
KEGG koko:K06642
KEGG Pathwayko03450,ko04110,map03450,map04110
KEGG ModuleM00297
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0001756,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0001933,GO:0002200,GO:0002218,GO:0002244,GO:0002253,GO:0002320,GO:0002326,GO:0002328,GO:0002360,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0002562,GO:0002568,GO:0002637,GO:0002638,GO:0002681,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002698,GO:0002700,GO:0002701,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004672,GO:0004674,GO:0004677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0005737,GO:0005829,GO:0005958,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006975,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008630,GO:0009314,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010332,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010941,GO:0010942,GO:0010948,GO:0012501,GO:0016043,GO:0016233,GO:0016301,GO:0016310,GO:0016444,GO:0016445,GO:0016447,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022402,GO:0022414,GO:0023052,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0030217,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031400,GO:0031570,GO:0031571,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032269,GO:0032446,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0032993,GO:0033077,GO:0033151,GO:0033152,GO:0033153,GO:0033554,GO:0034641,GO:0035234,GO:0035282,GO:0035556,GO:0036211,GO:0040008,GO:0042110,GO:0042113,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042592,GO:0042752,GO:0042770,GO:0042981,GO:0043009,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043434,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045088,GO:0045089,GO:0045165,GO:0045321,GO:0045786,GO:0045893,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046649,GO:0048145,GO:0048146,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048538,GO:0048583,GO:0048584,GO:0048585,GO:0048638,GO:0048639,GO:0048646,GO:0048660,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060322,GO:0060429,GO:0060548,GO:0061053,GO:0065007,GO:0065008,GO:0070013,GO:0070419,GO:0070647,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072718,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0090344,GO:0097159,GO:0097190,GO:0097193,GO:0097327,GO:0097681,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990391,GO:2000045,GO:2000112,GO:2000134,GO:2000772,GO:2000773,GO:2001141,GO:2001228,GO:2001229
Exons4
Evalue1.75e-48
EggNOG OGsCOG5032@1|root,KOG0891@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size465
COG categoryBDLTU
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854102.4836712-CDS-H-canaliculatus_M_contigs764:7819..79861696854102.4836712-CDS-H-canaliculatus_M_contigs764:7819..7986Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs764 7820..7986 +
1696854102.497234-CDS-H-canaliculatus_M_contigs764:8525..86161696854102.497234-CDS-H-canaliculatus_M_contigs764:8525..8616Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs764 8526..8616 +
1696854102.508978-CDS-H-canaliculatus_M_contigs764:8820..89431696854102.508978-CDS-H-canaliculatus_M_contigs764:8820..8943Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs764 8821..8943 +
1696854102.5208452-CDS-H-canaliculatus_M_contigs764:9842..99261696854102.5208452-CDS-H-canaliculatus_M_contigs764:9842..9926Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs764 9843..9926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs764.2.1prot_H-canaliculatus_M_contigs764.2.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs764 7820..9926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs764.2.1

>prot_H-canaliculatus_M_contigs764.2.1 ID=prot_H-canaliculatus_M_contigs764.2.1|Name=mRNA_H-canaliculatus_M_contigs764.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=155bp
MAKAKNDASSGRAKLWQFSGWMSDFDSNKHRLEVPGQYGGLMAAPPRVSH
HSRIVSFGSELLVMGSLRVPKRLTIHGDDERDHMFLVKGGEDLRVDQRVE
QLFEVMNAVMAKSASCSRARLRNKTYKVIPVTPDIGLIEWVQNTRPLKSV
IEQGL
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mRNA from alignment at H-canaliculatus_M_contigs764:7820..9926+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs764.2.1 ID=mRNA_H-canaliculatus_M_contigs764.2.1|Name=mRNA_H-canaliculatus_M_contigs764.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2107bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs764:7820..9926+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGCGAAAGCGAAGAACGACGCCTCGTCTGGGAGGGCGAAACTGTGGCA GTTCTCCGGCTGGATGTCTGACTTCGACTCCAACAAGCACAGGCTAGAGG TTCCCGGGCAGTACGGGGGGCTAATGGCTGCGCCTCCGCGAGTTTCTCAT CACAGTCGCATCGTCAGGTAACAGTTACCGTCGGCATACAACACCCGTCC GACTCTCGATGCCGTCATGATGTCCCGTGGTTTGTTGTGTTCATTTTATA GGAAGCGTTAGCCGCGCTTTCGTCCAGTGCCGTCCCCAGCCGCATTGCTT GGTCAGGGTTTCCATGGAATCATGAGATTGTTGAGATATGACATGCTTTG AAGCGTCCTCTGACGCAAAAGCCTCGTATGTCACCGCACCCCTTCGTGTT GATCACAAAACTGAAAATGGCCATCCATACTGTATCCATATCTACTTGCA TAACAAACATTTAGAAAAGCGTGAGAGCGCGATATCCCGAAGCCACGGTT TCGTGGAAGTCTCACCCTTCTTTCGTTTTTCACATTTTCTCTTGAGCGCG TTGTCTCCAATTCATGCTTCTTGGCGCTGGAAGCTGCGCTGGTCGTTCCA CGTTCCGCCTCGTCACCCATGGCTTGGGATTGATCTCCTCCTGTTGATTA GGATCGTTGTCAAACCTCCGGAAGTCTGCGCTGATGTTTCCGCGATGTCT TCGCAGCTTCGGGAGTGAGCTCCTGGTGATGGGGTCGTTGCGAGTTCCGA AGCGGCTGACGATCCACGGCGACGATGAGCGTGATCACATGTTCTTGGTG AGATGAGAAGTGGTGCGCAAGGGCAACTTTTGGTGTAGCTGGTGGAACTT GGTGAAGTTGGCATACCTTGGCGAGAAAATGAGACTCAATTTGTGGCAGC TGTTGTTTGCCGGATAGGAGCCATGGCGCTTGCGATGTCCGTACAACCCC GGGAAACCGTCGTGATCAGTGTAGGTTTGTTTTCTTCTCATTGTCACCCA GGTCAAGGGAGGAGAGGACCTACGGGTGGACCAGCGTGTGGAGCAGTTGT TCGAAGTTATGAACGCCGTGATGGCGAAGTCCGCCAGCTGCAGCCGCGCG AGACTTCGCAACAAGACCTACAAGGTGAGAGGTCGCGTCCAAACTCCCAA ATTTCATTCGCCGGTGCTCGCGTTCACGTTGTCTGTCGCGTAGCCTGACC AGGACTCCGGACGCCTCAGGCACACCTGAACGCTATGCACTTGCGCCACA GTAAGGGGAGTAGGACAAGGGGAGCGGTGTGGGATTCTCATCCACTACGC TCCTAGATACGTTCGCTTGACACCACGAAGCAATCGAATGGCAGTCTATC GAAAATGAAAGATTTAGGGAGGTGTCTGGCGGAAGACTTTCATGTTTGAT ATAACCGGATGTGGAGCAAAGGCGTCAGCCAAGGACCATGTTTGACCGCA CCGAAATTCAGCAGCGGAATCGTTTAGCACTAGCGTGAATCACCCCCCCT CCCATTCCGTCGTTACGCCGGAGTTGTCCGTGCAAGTTTCGAATTACATA TATTCCAACGGAATGGAATTGATGAATGCTTTCTGACTTAGACGGTTGCC GGACCGATGTGTATAATAACGGTGATTCTATCGTGTGACGGGAACATTGA AGAAACCTGATTCAACGCGATATCGAGAATCCTATGCGGGGTATTTTGCG CATTGCCTGGTGTTGGTTGGCCTCGAATGAGCCGTACAGCATTTGGTTCA CGGCCCGAGCTTAAATCATCTAGCCCACCTTCAGCTTCCAGTGGTTGGTG CGTACGTGTTGGAAATTGATTGATCATTGGTTGCCGCTGGTTTGTCTGTA TCTATGCTCTTGGATGTCCCTTGTTTTTTTAAAGAAGATAACAACACCGG GGGGCTGTTTCTGAGCGACGTCTCAGCAGGCGTCTCAAACGGCATGTGCA GAATTATATGCAGAGAGAGTTAAGTGCGTTGGACGGCATGAAAACATCAA TTTATGTTATCGATTTGTCGCAGGTGATTCCGGTGACACCAGACATCGGT CTTATCGAGTGGGTGCAGAACACCAGACCCCTTAAATCCGTCATCGAGCA AGGGCTC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs764:7820..9926+

>mRNA_H-canaliculatus_M_contigs764.2.1 ID=mRNA_H-canaliculatus_M_contigs764.2.1|Name=mRNA_H-canaliculatus_M_contigs764.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=465bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs764:7820..9926+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGCGAAAGCGAAGAACGACGCCTCGTCTGGGAGGGCGAAACTGTGGCA
GTTCTCCGGCTGGATGTCTGACTTCGACTCCAACAAGCACAGGCTAGAGG
TTCCCGGGCAGTACGGGGGGCTAATGGCTGCGCCTCCGCGAGTTTCTCAT
CACAGTCGCATCGTCAGCTTCGGGAGTGAGCTCCTGGTGATGGGGTCGTT
GCGAGTTCCGAAGCGGCTGACGATCCACGGCGACGATGAGCGTGATCACA
TGTTCTTGGTCAAGGGAGGAGAGGACCTACGGGTGGACCAGCGTGTGGAG
CAGTTGTTCGAAGTTATGAACGCCGTGATGGCGAAGTCCGCCAGCTGCAG
CCGCGCGAGACTTCGCAACAAGACCTACAAGGTGATTCCGGTGACACCAG
ACATCGGTCTTATCGAGTGGGTGCAGAACACCAGACCCCTTAAATCCGTC
ATCGAGCAAGGGCTC
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