mRNA_H-canaliculatus_M_contigs76107.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76107.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76107.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydrolase (n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A4P7JBD3_9RHOB)

HSP 1 Score: 301 bits (770), Expect = 3.780e-100
Identity = 148/176 (84.09%), Postives = 164/176 (93.18%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NGEFPFT HY+D  VGLA+MRA GLTHR++TFPGALGV+LLPAAEIA AISAYNDHLAQL +DT G+LIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSL E + LRPLLEAANE+GCHIMLHPGLKVG++PP RPAD +QYRLSA++LQSSV+QVALTVI+SDMLDA
Sbjct:   46 NGEFPFTSHYYDHRVGLAEMRAAGLTHRMLTFPGALGVELLPAAEIATAISAYNDHLAQLTQDTDGALIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLQELEILRPLLEAANEYGCHIMLHPGLKVGEQPPARPADHIQYRLSAVELQSSVAQVALTVIVSDMLDA 221          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Yoonia sediminilitoris TaxID=1286148 RepID=A0A2T6KIV9_9RHOB)

HSP 1 Score: 291 bits (746), Expect = 1.510e-96
Identity = 146/175 (83.43%), Postives = 154/175 (88.00%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLD 525
            NGEFPFTDHY D  VGLA MRA GLTHRL+TFPGALGVDLLPA EIA AI  YND+LAQL  DT G+LIGLAGVPL D+DLACAEV RIRRDLGLPGIILPSNYFNSLAEA  + PLL AANEFGCHIMLHPGLKVGQEPPP PAD +QYRLSA+DLQSS SQVALTVILS+MLD
Sbjct:   46 NGEFPFTDHYQDHRVGLAAMRAAGLTHRLLTFPGALGVDLLPAVEIAPAIGRYNDYLAQLGADTDGALIGLAGVPLDDMDLACAEVTRIRRDLGLPGIILPSNYFNSLAEAAAMAPLLRAANEFGCHIMLHPGLKVGQEPPPLPADFVQYRLSAVDLQSSASQVALTVILSEMLD 220          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydrolase (n=1 Tax=Planktotalea frisia TaxID=696762 RepID=A0A1L9P1M4_9RHOB)

HSP 1 Score: 286 bits (732), Expect = 2.070e-94
Identity = 140/176 (79.55%), Postives = 158/176 (89.77%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NGEFPFT+HY+D  VGLA+M AQGLTHRL+TFPGALGVDLLPA EIA AI A+NDHLA+L   T G+LIGLAGVPLAD+DLACAEV RIRRDLGLPGIILPSNYFN+LA+ + +RPLL+AAN +GCHIMLHPGLKVG+EPP RP D MQYRLSA+DLQ+S +QVALTVILSDMLDA
Sbjct:   46 NGEFPFTEHYYDHRVGLAEMNAQGLTHRLLTFPGALGVDLLPAHEIATAIYAFNDHLAELGAQTQGALIGLAGVPLADMDLACAEVLRIRRDLGLPGIILPSNYFNTLADMEEMRPLLDAANTYGCHIMLHPGLKVGEEPPARPTDHMQYRLSALDLQNSAAQVALTVILSDMLDA 221          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydro-rel (domain-containing protein n=4 Tax=unclassified Rhodobacter TaxID=196779 RepID=A0A0R2WLV6_9RHOB)

HSP 1 Score: 276 bits (706), Expect = 1.650e-90
Identity = 134/176 (76.14%), Postives = 155/176 (88.07%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NGEFPFT+HY+D  VGLA+M+A GLTHR++TFPGALGVDLLPA+EIA AIS YND+LA+L K+T G+LIGL GVPLAD+ LAC EVRRIRRDL LPG+ILPSNYFNS+ E + LRP LEAANE GCHIMLHPGLKVG+E P RP D +QYRLSA++LQSS +QVALTVILSD+LDA
Sbjct:   46 NGEFPFTEHYYDHRVGLAEMKAVGLTHRMLTFPGALGVDLLPASEIASAISVYNDYLAKLTKETDGTLIGLGGVPLADMSLACKEVRRIRRDLRLPGVILPSNYFNSIREVEELRPFLEAANEHGCHIMLHPGLKVGEEVPQRPTDHIQYRLSAVELQSSAAQVALTVILSDILDA 221          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydrolase (n=2 Tax=Amylibacter cionae TaxID=2035344 RepID=UPI0019A48B9D)

HSP 1 Score: 275 bits (703), Expect = 6.850e-90
Identity = 135/176 (76.70%), Postives = 155/176 (88.07%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NGEF FTDHYHD  VGL  M A GLT RL+TFPGALGV+LLPA +IA++IS YN +L+QL K+T G+LIGL GVPLA++DLACAEV R+RR+LGLPGIILPSNYFNSLAEA+ +RPLL AANE+GCHIMLHPGLKVG+  PPRPAD +QYRLSA++LQSS SQVALTVILSDMLDA
Sbjct:   50 NGEFEFTDHYHDHRVGLERMEASGLTRRLLTFPGALGVELLPANQIAESISVYNTYLSQLTKETNGALIGLGGVPLANMDLACAEVTRVRRNLGLPGIILPSNYFNSLAEAEEMRPLLVAANEYGCHIMLHPGLKVGEAVPPRPADNVQYRLSAVELQSSASQVALTVILSDMLDA 225          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-6 TaxID=2013669 RepID=A0A2N3BPD6_9PROT)

HSP 1 Score: 230 bits (586), Expect = 2.720e-72
Identity = 116/176 (65.91%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NG FPF   +HD  VGLA M A GLT RL+TFPGALG+DLLPAAE+A  I+A+NDHLA L   TGG+L GLAG+PLAD+D A AEV RIRRDLGLPGIILP NYF S+A A  L P+L AAN  G H+M+HPGL VGQEPP  PAD  QYR SA+ LQ+ ++  ALT++LSD+LDA
Sbjct:   49 NGAFPFGADHHDHRVGLAQMAATGLTARLLTFPGALGLDLLPAAEVAGPIAAFNDHLAGLGAQTGGALRGLAGLPLADIDRAAAEVLRIRRDLGLPGIILPGNYFASIAAARALTPILAAANATGAHVMIHPGLMVGQEPPAPPADHPQYRTSAVALQAQIADTALTLVLSDILDA 224          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydrolase (family protein n=2 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B807_9RHOB)

HSP 1 Score: 226 bits (575), Expect = 1.180e-70
Identity = 111/173 (64.16%), Postives = 137/173 (79.19%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDM 519
            NGEFPF+  YHD  VGLA M  QGL+HR++TFPGAL +D+ P AE+A AISA+N HLA L ++TGG ++GL G+PLAD+DLA AEVRRIRRDL LPGIILP + FNS+AEA +L P+LEAANE GC +M+HPG +VG  PP   AD  QYR SA+ LQS ++Q ALT+ILSD+
Sbjct:   50 NGEFPFSPAYHDISVGLAQMDRQGLSHRMLTFPGALCLDIQPGAEVAQAISAFNTHLAGLRQETGGRILGLGGLPLADMDLAVAEVRRIRRDLNLPGIILPGDCFNSVAEARSLAPILEAANETGCLVMIHPGPRVGGAPPDPAADFPQYRTSAVALQSQIAQTALTLILSDI 222          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Predicted (metal-dependent hydrolase, TIM-barrel fold n=1 Tax=Pseudorhodobacter antarcticus TaxID=1077947 RepID=A0A1H8N0P2_9RHOB)

HSP 1 Score: 209 bits (531), Expect = 4.580e-64
Identity = 111/175 (63.43%), Postives = 130/175 (74.29%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLD 525
            NGEFPF+  YHDP VGLA M   G+THR+ITFPGALGVDLLP A  A AISA+N HLA L + + G LIGLAG+PLAD DLA  EV   R  +GLPGIILP NYF + A A  LRP+L  A+  G  +M+HPGL VGQ+PP  P D  QYR+SA+DLQ+ ++Q ALTVILSDMLD
Sbjct:   44 NGEFPFSPAYHDPAVGLAQMDDCGITHRMITFPGALGVDLLPVAA-APAISAFNAHLADLGRSSAGRLIGLAGLPLADSDLAVREVAHSRA-MGLPGIILPGNYFLTEAAAAPLRPVLAEASRLGALVMIHPGLLVGQQPPVLPQDHPQYRISALDLQNQIAQTALTVILSDMLD 216          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Aquibium carbonis TaxID=2495581 RepID=A0A429YZN9_9HYPH)

HSP 1 Score: 209 bits (531), Expect = 4.990e-64
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLDA 528
            NGEFPFT  +HD  +GLA M AQG+T R++TFPGAL  D+LP AE   AI A+NDH+A+L   TGG L  LAG+PLAD++ A  E+ R+RR+L LPG ILPSNYFN++A+A  L P+L AANE G  +MLHPGL VG++ P   AD  QYR SA+ LQ+  SQV LT+ILSD+LDA
Sbjct:   44 NGEFPFTPSHHDHTIGLAKMAAQGVTRRMLTFPGALCADVLPLAESLPAIRAFNDHMAELRARTGGRLTALAGLPLADMEEAALELVRVRRELRLPGAILPSNYFNTIAQARALEPVLRAANETGALLMLHPGLMVGEDAPALAADHPQYRTSAVALQAQASQVVLTLILSDLLDA 219          
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Match: Putative (amidohydrolase (Aminocarboxymuconate-semialdehyde decarboxylase) n=1 Tax=Seohaeicola zhoushanensis TaxID=1569283 RepID=A0A8J3GWX6_9RHOB)

HSP 1 Score: 194 bits (494), Expect = 1.370e-58
Identity = 102/175 (58.29%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAISAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIILPSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQYRLSAIDLQSSVSQVALTVILSDMLD 525
            NGEFPFT  +HD +VGLA M   GLT R++TFPGAL VD LPA E+A  I+A+NDHLA L    G  L GLAG+PLAD+ LA  E+RR+RR+L LPG ILPS+YFNS+ +A  L P+LEAA+E G  +MLHPG   GQ P P   D  QYR S I LQ+  +Q ALTV+L  +LD
Sbjct:   42 NGEFPFTPAHHDAQVGLARMAEIGLTRRMLTFPGALCVDSLPAGEVAAPITAFNDHLAGLK---GDRLTGLAGLPLADMQLAARELRRVRRELRLPGAILPSDYFNSIEDARKLAPVLEAASEEGSLLMLHPGPMAGQSPAPLAPDFPQYRTSVIQLQAQAAQTALTVVLGGLLD 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76107.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Amidohydrolase3.780e-10084.09n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A4P7J... [more]
Amidohydro-rel1.510e-9683.43domain-containing protein n=1 Tax=Yoonia sediminil... [more]
Amidohydrolase2.070e-9479.55n=1 Tax=Planktotalea frisia TaxID=696762 RepID=A0A... [more]
Amidohydro-rel1.650e-9076.14domain-containing protein n=4 Tax=unclassified Rho... [more]
Amidohydrolase6.850e-9076.70n=2 Tax=Amylibacter cionae TaxID=2035344 RepID=UPI... [more]
Amidohydro-rel2.720e-7265.91domain-containing protein n=1 Tax=Alphaproteobacte... [more]
Amidohydrolase1.180e-7064.16family protein n=2 Tax=Aestuariicoccus sp. KMU-90 ... [more]
Predicted4.580e-6463.43metal-dependent hydrolase, TIM-barrel fold n=1 Tax... [more]
Amidohydro-rel4.990e-6459.66domain-containing protein n=1 Tax=Aquibium carboni... [more]
Putative1.370e-5858.29amidohydrolase (Aminocarboxymuconate-semialdehyde ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76107contigH-canaliculatus_M_contigs76107:3..530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1100720.ALKN01000040_gene2144
PFAMsAmidohydro_2
Model size528
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00779
KEGG koko:K03392
KEGG ReactionR04323
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-28
EggNOG OGsCOG2159@1|root,COG2159@2|Bacteria,1R5PG@1224|Proteobacteria,2VPKM@28216|Betaproteobacteria,4AH4D@80864|Comamonadaceae
EC4.1.1.45
DescriptionAmidohydrolase
Cds size528
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854098.934585-CDS-H-canaliculatus_M_contigs76107:2..5301696854098.934585-CDS-H-canaliculatus_M_contigs76107:2..530Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76107 3..530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76107.1.1prot_H-canaliculatus_M_contigs76107.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76107 3..530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76107.1.1

>prot_H-canaliculatus_M_contigs76107.1.1 ID=prot_H-canaliculatus_M_contigs76107.1.1|Name=mRNA_H-canaliculatus_M_contigs76107.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=176bp
NGEFPFTDHYHDPEVGLADMRAQGLTHRLITFPGALGVDLLPAAEIADAI
SAYNDHLAQLNKDTGGSLIGLAGVPLADLDLACAEVRRIRRDLGLPGIIL
PSNYFNSLAEADTLRPLLEAANEFGCHIMLHPGLKVGQEPPPRPADLMQY
RLSAIDLQSSVSQVALTVILSDMLDA
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mRNA from alignment at H-canaliculatus_M_contigs76107:3..530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76107.1.1 ID=mRNA_H-canaliculatus_M_contigs76107.1.1|Name=mRNA_H-canaliculatus_M_contigs76107.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=528bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76107:3..530- (Hapterophycus canaliculatus Oshoro7m male)
AATGGAGAGTTTCCCTTTACTGATCACTATCACGATCCGGAGGTTGGGCT TGCTGACATGCGAGCCCAAGGCCTTACACATCGTTTGATCACTTTCCCCG GTGCTTTGGGCGTTGATCTGTTACCTGCGGCTGAGATCGCTGATGCAATC TCAGCCTACAATGATCATCTGGCCCAGTTGAACAAAGACACGGGCGGTTC TTTGATCGGGCTGGCAGGTGTGCCGCTTGCCGATCTTGATCTGGCCTGCG CCGAAGTGCGCCGCATTCGTCGCGATCTGGGATTGCCGGGGATCATCCTT CCGTCAAACTATTTCAACTCACTTGCAGAGGCGGATACGCTGCGCCCCTT GCTGGAAGCGGCAAATGAATTTGGTTGCCACATCATGTTGCATCCGGGTT TGAAGGTCGGGCAAGAACCGCCACCACGCCCGGCAGATCTGATGCAGTAC CGTCTCTCTGCAATAGACTTGCAATCAAGTGTCAGTCAGGTTGCGCTGAC TGTTATCCTGTCAGACATGCTCGATGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76107:3..530-

>mRNA_H-canaliculatus_M_contigs76107.1.1 ID=mRNA_H-canaliculatus_M_contigs76107.1.1|Name=mRNA_H-canaliculatus_M_contigs76107.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=528bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76107:3..530- (Hapterophycus canaliculatus Oshoro7m male)
AATGGAGAGTTTCCCTTTACTGATCACTATCACGATCCGGAGGTTGGGCT
TGCTGACATGCGAGCCCAAGGCCTTACACATCGTTTGATCACTTTCCCCG
GTGCTTTGGGCGTTGATCTGTTACCTGCGGCTGAGATCGCTGATGCAATC
TCAGCCTACAATGATCATCTGGCCCAGTTGAACAAAGACACGGGCGGTTC
TTTGATCGGGCTGGCAGGTGTGCCGCTTGCCGATCTTGATCTGGCCTGCG
CCGAAGTGCGCCGCATTCGTCGCGATCTGGGATTGCCGGGGATCATCCTT
CCGTCAAACTATTTCAACTCACTTGCAGAGGCGGATACGCTGCGCCCCTT
GCTGGAAGCGGCAAATGAATTTGGTTGCCACATCATGTTGCATCCGGGTT
TGAAGGTCGGGCAAGAACCGCCACCACGCCCGGCAGATCTGATGCAGTAC
CGTCTCTCTGCAATAGACTTGCAATCAAGTGTCAGTCAGGTTGCGCTGAC
TGTTATCCTGTCAGACATGCTCGATGCC
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