mRNA_H-canaliculatus_M_contigs7608.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH6_ECTSI) HSP 1 Score: 229 bits (583), Expect = 3.360e-72 Identity = 109/116 (93.97%), Postives = 116/116 (100.00%), Query Frame = 3
Query: 3 CYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 350
CYNILFC+LI+MAELEWTTTVREMFVLHSWIPRG+VYSFVGVLVLEEEDEKGLDLGGFG+YIT+IAW+MVGIGALYFLLG+CCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA
Sbjct: 56 CYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIIAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 171
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP3_9PHAE) HSP 1 Score: 228 bits (582), Expect = 2.910e-71 Identity = 108/116 (93.10%), Postives = 116/116 (100.00%), Query Frame = 3
Query: 3 CYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 350
CYNILFC+LI+MAELEWTTTVREMFVLHSWIPRG+VYSFVGVLVLEEEDEKGLDLGGFG+YIT++AW+MVGIGALYFLLG+CCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA
Sbjct: 111 CYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIVAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 226
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Golgi (apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYB2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.030e-16 Identity = 42/112 (37.50%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHAEMQAAMRRDHD 341
Y I+F + +V EL WT VR+ ++L +WI RG +Y+FVG+L +++E E + V+I ++G+G LYF++G+ C+K +RD++ A + L + AE++ A+RR D
Sbjct: 150 YGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNVFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 261
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMH7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.970e-16 Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGL----DLGGFGV---YITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHA-EMQAAMRRDHD 341
Y I C +IVM ELEWT+ +RE +L +W+ RG++Y+FVGVL +E+ + D F V +I V++ +MVG+G LYF++GICC++ + +K ++ VA A +M AA + +D
Sbjct: 99 YIIALCAMIVMNELEWTSVIRESRLLRNWLTRGLIYAFVGVLGIEQYEASPSGRHDDSAHFDVAMNFIRVVSNIMVGVGGLYFVMGICCMQLVSNKLRHEYEERVARAGDMHAAAQTYND 218
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Cryptochrome (DASH n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.590e-15 Identity = 41/112 (36.61%), Postives = 71/112 (63.39%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHAEMQAAMRRDHD 341
Y I+F + +V EL WT VR+ ++L +WI RG +Y+FVG+L +++E E + +I ++G+G LYF++G+ C+K +RD++ A + L + AE++ A+RR D
Sbjct: 618 YGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNAFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 729
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP16_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.730e-12 Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 3
Query: 3 CYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEK------GLDLGGFGVYIT-----VIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLV 299
CY ++FCL IV+AELEW ++ +L W RGI+YSF+GVL +EE K G V+I V A V+V G LYF++G+ C+ +IRDK +K LV
Sbjct: 292 CYLVVFCLTIVLAELEWPGPIKRSNILQFWPFRGILYSFIGVLGMEESIVKPRTLAEGTTWSSSPVFIAHMALKVSAMVLVVTGCLYFIMGLLCINKIRDKCRQNYKELV 401
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KE92_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.490e-11 Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDL-------------GGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMARHKTLVAHAEMQ 317
Y LFC+ +++AELE + M +LHSW+ RGIVYSF+G++ +EE DL G ++I + ++ M +G LYFL+G C++R+RD ++ + AEM+
Sbjct: 173 YMTLFCVGVIVAELE-CLLINRMPLLHSWLVRGIVYSFLGIVGMEESVAVKFDLNNDDDSSVPTTREGHASLFIKLSSYAMTALGVLYFLMGCLCMRRLRDNCRTKYNERIKKAEMK 288
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NFG8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.920e-11 Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEED------------EKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKK 275
Y ILF L+ V+AE+E V+ + L +W+ RG++YSF+G++ EE + G++ ++I V +W MVG+G LY L+GI C+K+I+D +
Sbjct: 105 YMILFTLVFVLAEVEMPFIVKHVASLQNWVLRGLMYSFIGLIGAEEARSVVVYKAVKGKLKTGMNTKMVSLFIEVASWAMVGVGLLYLLMGILCLKKIKDNR 206
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.270e-10 Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIR 266
Y I+FC+ I++AELEW + ++ +L W RG++Y+FVG+L LE D + YI W++VG+G LYF +G+ + ++R
Sbjct: 31 YAIVFCIGIILAELEWPSIMKNAVLLRWWPVRGLLYTFVGLLTLEISDFNDNPVAEAFHYI--FGWILVGVGVLYFFMGLARLHKVR 115
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY58_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 5.440e-10 Identity = 30/93 (32.26%), Postives = 56/93 (60.22%), Query Frame = 3
Query: 6 YNILFCLLIVMAELEWTTTVREMFVLHSWIPRGIVYSFVGVLVLEEEDEKGLDLGGFGVYITVIAWVMVGIGALYFLLGICCVKRIRDKKMAR 284
Y ILF + ++ AELEW+ + L W RG+ Y FVG++ ++ D +G Y +++++M+ +G +YFLLG+ C++ +++ + AR
Sbjct: 107 YGILFSIFVIFAELEWSKFTKFFGFLKYWPARGLFYIFVGLITWDQTDATSSS--SYGTYEDIVSFLMMSVGGIYFLLGLACMRTVKEAERAR 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7608.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7608.2.1 >prot_H-canaliculatus_M_contigs7608.2.1 ID=prot_H-canaliculatus_M_contigs7608.2.1|Name=mRNA_H-canaliculatus_M_contigs7608.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=160bp MLQHLVLLVDRHGGAGVDDNGARDVRASLLDSQRHRLLLRWCPGFGGGGRback to top mRNA from alignment at H-canaliculatus_M_contigs7608:1445..4126- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7608.2.1 ID=mRNA_H-canaliculatus_M_contigs7608.2.1|Name=mRNA_H-canaliculatus_M_contigs7608.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2682bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7608:1445..4126- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7608:1445..4126- >mRNA_H-canaliculatus_M_contigs7608.2.1 ID=mRNA_H-canaliculatus_M_contigs7608.2.1|Name=mRNA_H-canaliculatus_M_contigs7608.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=480bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7608:1445..4126- (Hapterophycus canaliculatus Oshoro7m male)back to top |