mRNA_H-canaliculatus_M_contigs75800.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: MIF4G (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS3_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 3.500e-21 Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVE 177
+FDKLADQLL LP+DS KMLRTLVQ+V +KA+DEPTF DMYADLCVRL+ RST W+FV+
Sbjct: 805 KFDKLADQLLDLPMDSLKMLRTLVQAVFDKALDEPTFVDMYADLCVRLNERSTSWAFVK 863
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: MI (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 2.270e-20 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSF 171
+FDKLADQLL LP+DS KMLRTLVQ+V +KA+DEPTF DMYADLCVRL+ RST W+F
Sbjct: 352 KFDKLADQLLDLPMDSLKMLRTLVQAVFDKALDEPTFVDMYADLCVRLNERSTSWAF 408
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: MIF4G (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGV1_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.030e-14 Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVEV 180
+FD+L+ QLL +P++S ML+ LV+ V +KAI+E FADMYADLCVRL +S+ W+F++V
Sbjct: 120 KFDRLSQQLLEIPMESFDMLKALVEQVFDKAIEENFFADMYADLCVRLHSQSSGWTFIKV 179
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYN7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 7.670e-12 Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVE 177
+F+KL+ QL+ LP++S +ML ++ + +KA+DEP F DMYAD+CVRL+ + WSFV+
Sbjct: 209 KFEKLSHQLVTLPMESSEMLTVVIGLIFDKALDEPNFGDMYADMCVRLNEKFKFWSFVK 267
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5G1_PHATC) HSP 1 Score: 66.2 bits (160), Expect = 3.700e-11 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLS 147
+FDKLA Q+L +PL S ML+ ++ +V +KAIDEPTF DMYADLC RLS
Sbjct: 477 KFDKLATQMLEIPLTSSDMLKMMINNVYDKAIDEPTFGDMYADLCKRLS 525
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9X6_HETAK) HSP 1 Score: 65.9 bits (159), Expect = 4.900e-11 Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVE 177
+FD+L+ QL+A+ ++S +ML ++ V +KA+DEP F DMYADLCV+L S WSFV+
Sbjct: 58 KFDRLSAQLVAVRMESSEMLNAVIGLVFDKALDEPNFGDMYADLCVQLQANSRCWSFVK 116
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNW1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 8.630e-11 Identity = 29/60 (48.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVEV 180
+FDKL++Q+ +P+ S +ML ++ V KAIDEP F ++YADLCVRLS ++ SFV++
Sbjct: 19 KFDKLSNQMCDIPILSYEMLTMMIHVVYEKAIDEPHFGELYADLCVRLSQKAKSNSFVKI 78
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3H7_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.290e-10 Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVEV 180
+FD+L+ Q++ +P+ S +L ++++V +KAIDEP+F DMYADLCVRLS +FV +
Sbjct: 445 KFDRLSQQMVEIPVSSYAVLTMMIENVFDKAIDEPSFGDMYADLCVRLSQSVVGQNFVHI 504
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: MI (domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UMY6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.300e-10 Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVEV 180
+FD+LA QL ++ ++S +ML+T+++ + +KA+ EP F DMYADLCV L WSF+++
Sbjct: 608 KFDRLAGQLTSINMESLEMLQTVIKIIFDKAVSEPNFCDMYADLCVHLETNWKVWSFLKI 667
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Match: MI (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHF8_BRELC) HSP 1 Score: 63.5 bits (153), Expect = 3.310e-10 Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHRSTPWSFVEV 180
+FD+LA QL ++ ++S +ML+T+++ + +KA+ EP F DMYADLCV L WSF+++
Sbjct: 1192 KFDRLAGQLTSINMESLEMLQTVIKIIFDKAVSEPNFCDMYADLCVHLEANWQVWSFLKI 1251 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75800.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75800.1.1 >prot_H-canaliculatus_M_contigs75800.1.1 ID=prot_H-canaliculatus_M_contigs75800.1.1|Name=mRNA_H-canaliculatus_M_contigs75800.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=64bp QFDKLADQLLALPLDSKKMLRTLVQSVCNKAIDEPTFADMYADLCVRLSHback to top mRNA from alignment at H-canaliculatus_M_contigs75800:42..233+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75800.1.1 ID=mRNA_H-canaliculatus_M_contigs75800.1.1|Name=mRNA_H-canaliculatus_M_contigs75800.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=192bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75800:42..233+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75800:42..233+ >mRNA_H-canaliculatus_M_contigs75800.1.1 ID=mRNA_H-canaliculatus_M_contigs75800.1.1|Name=mRNA_H-canaliculatus_M_contigs75800.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=192bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75800:42..233+ (Hapterophycus canaliculatus Oshoro7m male)back to top |